BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1044.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEK80403.1| cell morphology-like protein [Herbaspirillum rubr... 545 e-153 gb|EGH51421.1| cell morphology protein [Pseudomonas syringae Cit 7] 421 e-115 ref|ZP_06459195.1| cell morphology protein [Pseudomonas syringae... 408 e-112 gb|EGH87025.1| cell morphology protein [Pseudomonas syringae pv.... 408 e-112 ref|ZP_07003698.1| alginate biosynthesis protein AlgJ [Pseudomon... 408 e-111 >gb|AEK80403.1| cell morphology-like protein [Herbaspirillum rubrisubalbicans M1] Length = 387 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 337/387 (87%), Positives = 355/387 (91%), Gaps = 2/387 (0%) Query: 1 MSTPPVLTPDTPHAPRPLARRASRWSGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRD 60 MSTPPVL PDTPHAP PLARRASRWSGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRD Sbjct: 1 MSTPPVLAPDTPHAPSPLARRASRWSGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRD 60 Query: 61 EALHGELTHKIAKQLSNAWLPTQAANLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQVN 120 EALHGELTHKIAKQLSNAWLPTQAANLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQ+N Sbjct: 61 EALHGELTHKIAKQLSNAWLPTQAANLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQIN 120 Query: 121 RHAQANAQTKRAAVLAIRQALAQRGIGLLVAVVPDKSRIAASALCGLTRPAELNARAAQW 180 HAQANAQTK AV+AIRQALA+RGI LLVAVVPDKSRIAA LCGL RPAELN RAAQW Sbjct: 121 HHAQANAQTKLQAVIAIRQALARRGISLLVAVVPDKSRIAADQLCGLLRPAELNGRAAQW 180 Query: 181 VSQLNQDGVAAIDLAPALAPLGASAYLHTDTHWNETGANAAAQAIAARITAAGVQATPQQ 240 V+ L Q GV AIDLAP LAPLGA+AYLHTDTHWNETGA+AAA+ IAA++ A G+QATPQQ Sbjct: 181 VAGLQQAGVQAIDLAPTLAPLGAAAYLHTDTHWNETGAHAAAEVIAAKL-ATGLQATPQQ 239 Query: 241 AYTAQPGKLAQRPGDLVHLAGLDWLPLRWQPTPESVAATVFTEAAATGQGAAAK-GGDDL 299 +Y +QPG LA+RPGDLVHLAGLDWLPLR QP PE VAAT F E GQG+A K GGDDL Sbjct: 240 SYQSQPGPLARRPGDLVHLAGLDWLPLRLQPAPEYVAATRFKEVPGAGQGSAPKPGGDDL 299 Query: 300 DDLLGDSQLPNVALIGTSFSRNSNFVGFLQMALGAKIGSFAKDGGKFSGSARDYFANPAF 359 DDLLGDS LPNVALIGTSFSRNSNFVGFLQMALGA+IGSFAKDGGKFSGSAR+YFANPAF Sbjct: 300 DDLLGDSNLPNVALIGTSFSRNSNFVGFLQMALGARIGSFAKDGGKFSGSAREYFANPAF 359 Query: 360 TQTPPKLVVWEIPERDLQTPYEPISLA 386 TQTPPKLV+WEIPERDLQTPYEPI+LA Sbjct: 360 TQTPPKLVLWEIPERDLQTPYEPIALA 386 >gb|EGH51421.1| cell morphology protein [Pseudomonas syringae Cit 7] Length = 368 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 223/358 (62%), Positives = 270/358 (75%), Gaps = 4/358 (1%) Query: 26 SGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRDEALHGELTHKIAKQLSNAWLPTQAA 85 +G+ LAL L GLL+ L+ G++E LP + D ALHGE+TH++AKQLS ++L AA Sbjct: 7 AGITLALFLGVGLLASGMLLVSGKVELLPRPLTLDAALHGEVTHQLAKQLSGSFLSQHAA 66 Query: 86 NLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQVNRHAQANAQTKRAAVLAIRQALAQRG 145 N+ER SWLL DTGPRVR+GCPGWLFL +E ++NR AQANAQ K AV+A++++L +RG Sbjct: 67 NIERGASWLLFHDTGPRVRQGCPGWLFLTDEFRLNRDAQANAQRKAQAVIAVQRSLKKRG 126 Query: 146 IGLLVAVVPDKSRIAASALCGLTRPAELNARAAQWVSQLNQDGVAAIDLAPALAPLGASA 205 I LLVAVVPDKSRIAA+ LCGL RP L AR QW L GV A+DL L PLG +A Sbjct: 127 IELLVAVVPDKSRIAATRLCGLYRPDALQARVEQWTHDLQAAGVDALDLTATLQPLGETA 186 Query: 206 YLHTDTHWNETGANAAAQAIAARITAAGVQATPQQAYTAQPGKLAQRPGDLVHLAGLDWL 265 YL TDTHW+E+GAN+AA+AI ++ AG+QATPQ+ + Q +A+RPGDLV LAGLDWL Sbjct: 187 YLRTDTHWSESGANSAARAIGLQVQKAGIQATPQRQFQIQTLPIAERPGDLVRLAGLDWL 246 Query: 266 PLRWQPTPESVAATVFTEAAATGQGAAAKGGDDLDDLLGDSQLPNVALIGTSFSRNSNFV 325 P QP P+SVAAT TE A+ +A G D+LDDL GDS LPNVALIGTSFSRNS FV Sbjct: 247 PSSLQPAPQSVAATQITELAS----ESATGSDNLDDLFGDSNLPNVALIGTSFSRNSGFV 302 Query: 326 GFLQMALGAKIGSFAKDGGKFSGSARDYFANPAFTQTPPKLVVWEIPERDLQTPYEPI 383 GFLQ LGA IG+FA+DGG+FSG+A YF NPAF QTPPKL++WEIPERDLQTPY I Sbjct: 303 GFLQRELGAPIGNFARDGGEFSGAANVYFDNPAFRQTPPKLLIWEIPERDLQTPYVAI 360 >ref|ZP_06459195.1| cell morphology protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gb|EGH04031.1| cell morphology protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 379 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 224/368 (60%), Positives = 269/368 (73%), Gaps = 4/368 (1%) Query: 18 LARRASRWSGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRDEALHGELTHKIAKQLSN 77 LA R +G+ L + GLL+ L+ G++E LP + D ALHGE+THK+AKQLS Sbjct: 14 LAVRTCGVAGITLVAFIGVGLLASCMLLASGKVELLPKPLTLDIALHGEVTHKLAKQLSG 73 Query: 78 AWLPTQAANLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQVNRHAQANAQTKRAAVLAI 137 +L +AAN+ER SWLL DTGPRVR+GCPGWLFL +E ++NR AQANAQ K AV+ + Sbjct: 74 TFLAQRAANIERGASWLLFHDTGPRVRQGCPGWLFLTDEFRLNRDAQANAQHKAQAVIDV 133 Query: 138 RQALAQRGIGLLVAVVPDKSRIAASALCGLTRPAELNARAAQWVSQLNQDGVAAIDLAPA 197 +++L +RGI LLVAVVPDKSRIAA+ LCGL RP AR QW + L GV +DL Sbjct: 134 QRSLKKRGIDLLVAVVPDKSRIAAAQLCGLYRPEVQQARVVQWTNSLKDAGVDTLDLTTT 193 Query: 198 LAPLGASAYLHTDTHWNETGANAAAQAIAARITAAGVQATPQQAYTAQPGKLAQRPGDLV 257 L PLG +AYL TDTHW+E+GANAAA+A+A + G +ATPQ+ + +A+RPGDLV Sbjct: 194 LQPLGDTAYLRTDTHWSESGANAAARALALHLRKVGFRATPQRQFQTSIAPIAERPGDLV 253 Query: 258 HLAGLDWLPLRWQPTPESVAATVFTEAAATGQGAAAKGGDDLDDLLGDSQLPNVALIGTS 317 LAGLDWLPL QP P+SVAAT TE A+ AA GGD+LDDL GDS LPNVALIGTS Sbjct: 254 RLAGLDWLPLSLQPAPQSVAATQITELAS----EAASGGDNLDDLFGDSNLPNVALIGTS 309 Query: 318 FSRNSNFVGFLQMALGAKIGSFAKDGGKFSGSARDYFANPAFTQTPPKLVVWEIPERDLQ 377 FSRNS F GFLQ LGA IGSFA+DGG+FSG+A YF NPAF QTPPKLV+WEIPERDLQ Sbjct: 310 FSRNSGFTGFLQRELGAPIGSFARDGGEFSGAANVYFDNPAFRQTPPKLVIWEIPERDLQ 369 Query: 378 TPYEPISL 385 T YE I+L Sbjct: 370 TVYEVINL 377 >gb|EGH87025.1| cell morphology protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 379 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 227/374 (60%), Positives = 272/374 (72%), Gaps = 4/374 (1%) Query: 12 PHAPRPLARRASRWSGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRDEALHGELTHKI 71 P P LA R +G+ L + GLL+ L+ G++E LP + D ALHGE+THK+ Sbjct: 8 PPLPSELAVRTCGVAGITLVAFIGVGLLASCMLLASGKVELLPKPLTLDAALHGEVTHKL 67 Query: 72 AKQLSNAWLPTQAANLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQVNRHAQANAQTKR 131 AKQLS +L +AAN+ER SWLL DTGPRVR+GCPGWLFL +E ++NR AQANAQ K Sbjct: 68 AKQLSGTFLAQRAANIERGASWLLFHDTGPRVRQGCPGWLFLTDEFRLNRDAQANAQHKA 127 Query: 132 AAVLAIRQALAQRGIGLLVAVVPDKSRIAASALCGLTRPAELNARAAQWVSQLNQDGVAA 191 AV+ ++++L +RGI LLVAVVPDKSRIAA+ LCGL RP AR QW + L GV Sbjct: 128 QAVIDVQRSLKKRGIDLLVAVVPDKSRIAAAQLCGLYRPEVQQARVVQWTNSLKDAGVDT 187 Query: 192 IDLAPALAPLGASAYLHTDTHWNETGANAAAQAIAARITAAGVQATPQQAYTAQPGKLAQ 251 +DL L PLG +AYL TDTHW+E+GANAAA+A+A + AG QATPQ+ + +A+ Sbjct: 188 LDLTTTLQPLGDTAYLRTDTHWSESGANAAARALALHLRKAGFQATPQRQFQTNIAPIAE 247 Query: 252 RPGDLVHLAGLDWLPLRWQPTPESVAATVFTEAAATGQGAAAKGGDDLDDLLGDSQLPNV 311 RPGDLV LAGLDWLPL QP P+SVAAT TE A+ AA GGD+LDDL GDS LPNV Sbjct: 248 RPGDLVRLAGLDWLPLSLQPAPQSVAATQVTELAS----EAASGGDNLDDLFGDSNLPNV 303 Query: 312 ALIGTSFSRNSNFVGFLQMALGAKIGSFAKDGGKFSGSARDYFANPAFTQTPPKLVVWEI 371 ALIGTSFSRNS F GFLQ LGA IGSFA+DGG+FSG+A YF NPAF QTPPKL++WEI Sbjct: 304 ALIGTSFSRNSGFTGFLQRELGAPIGSFARDGGEFSGAANVYFDNPAFRQTPPKLLIWEI 363 Query: 372 PERDLQTPYEPISL 385 PERDLQT YE I+L Sbjct: 364 PERDLQTVYEVINL 377 >ref|ZP_07003698.1| alginate biosynthesis protein AlgJ [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFI00902.1| alginate biosynthesis protein AlgJ [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 379 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 224/368 (60%), Positives = 269/368 (73%), Gaps = 4/368 (1%) Query: 18 LARRASRWSGVALALVLAAGLLSCAWLVQRGQIEWLPTTWSRDEALHGELTHKIAKQLSN 77 LA R +G+ L + GLL+ L+ G++E LP + D ALHGE+THK+AKQLS Sbjct: 14 LAVRTCGVAGITLVAFIGVGLLASCMLLASGKVELLPKPLTLDAALHGEVTHKLAKQLSG 73 Query: 78 AWLPTQAANLERAGSWLLLGDTGPRVRRGCPGWLFLAEELQVNRHAQANAQTKRAAVLAI 137 +L +AAN+ER SWLL DTGPRVR+GCPGWLFL +E ++NR AQANAQ K AV+ + Sbjct: 74 TFLAQRAANIERGASWLLFHDTGPRVRQGCPGWLFLTDEFRLNRDAQANAQHKAQAVIDV 133 Query: 138 RQALAQRGIGLLVAVVPDKSRIAASALCGLTRPAELNARAAQWVSQLNQDGVAAIDLAPA 197 +++L +RGI LLVAVVPDKSRIAA+ LCGL RP AR QW + L + GV +DL Sbjct: 134 QRSLKKRGIDLLVAVVPDKSRIAAAQLCGLYRPEVQQARVVQWTNSLKEAGVDTLDLTTT 193 Query: 198 LAPLGASAYLHTDTHWNETGANAAAQAIAARITAAGVQATPQQAYTAQPGKLAQRPGDLV 257 L PLG +AYL TDTHW+E+GANAAA+A+A + G QATPQ+ + +A+RPGDLV Sbjct: 194 LQPLGDTAYLRTDTHWSESGANAAARALALHLRKVGFQATPQRQFQTSIAPIAERPGDLV 253 Query: 258 HLAGLDWLPLRWQPTPESVAATVFTEAAATGQGAAAKGGDDLDDLLGDSQLPNVALIGTS 317 LAGLDWLPL QP P+SVAAT TE A+ AA GGD+LDDL GDS LPNVALIGTS Sbjct: 254 RLAGLDWLPLSLQPVPQSVAATQITELAS----EAAAGGDNLDDLFGDSNLPNVALIGTS 309 Query: 318 FSRNSNFVGFLQMALGAKIGSFAKDGGKFSGSARDYFANPAFTQTPPKLVVWEIPERDLQ 377 FSRNS F GFLQ LGA IGSFA+DGG+FSG+A YF N AF QTPPKLV+WEIPERDLQ Sbjct: 310 FSRNSGFTGFLQRELGAPIGSFARDGGEFSGAANVYFDNLAFRQTPPKLVIWEIPERDLQ 369 Query: 378 TPYEPISL 385 T YE I+L Sbjct: 370 TVYEVINL 377