BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1042.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEK80401.1| cell morphology-like protein [Herbaspirillum rubr... 351 6e-95 gb|EGH66001.1| cell morphology protein [Pseudomonas syringae pv.... 263 3e-68 ref|NP_790868.1| cell morphology protein [Pseudomonas syringae p... 261 9e-68 ref|ZP_03395440.1| cell morphology protein [Pseudomonas syringae... 260 1e-67 gb|EGH07536.1| cell morphology protein [Pseudomonas syringae pv.... 259 2e-67 >gb|AEK80401.1| cell morphology-like protein [Herbaspirillum rubrisubalbicans M1] Length = 219 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 196/219 (89%), Positives = 203/219 (92%) Query: 44 LRALTASAALLGCAGAMAADIPLYPTGPAEDAAFIRFINATPDALQVVAQKGQPPLKLDA 103 +RA A + LL A AMAADIPLYPTGPAEDAAFIRF+N T +ALQVVAQKGQPPLKL+A Sbjct: 1 MRAWVAGSLLLCSAAAMAADIPLYPTGPAEDAAFIRFVNGTSEALQVVAQKGQPPLKLEA 60 Query: 104 AKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPDPKGIRQVTVQDNPD 163 AKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPD KGI QVTVQDNPD Sbjct: 61 AKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPDAKGIGQVTVQDNPD 120 Query: 164 DFNGLKASLAFFNLDASCAAAALRPAGRTADLFKGVAQGSLQRRSINPVKLSVQLVCGGA 223 DFNGLKASLAFFNLDASCA AALRPAGR ADLFKGVAQGSLQRRSINPVKL+VQLVCGGA Sbjct: 121 DFNGLKASLAFFNLDASCAGAALRPAGRNADLFKGVAQGSLQRRSINPVKLAVQLVCGGA 180 Query: 224 NTGPVLDLGELKAGERYSVLLLPSAGGPRLLAATDKLAN 262 NTGPVLDLGELKAGERYSVLLLPS GP L+AATDKLAN Sbjct: 181 NTGPVLDLGELKAGERYSVLLLPSGKGPHLVAATDKLAN 219 >gb|EGH66001.1| cell morphology protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 224 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 155/224 (69%), Positives = 175/224 (78%), Gaps = 2/224 (0%) Query: 41 MSVLRALTAS-AALLGCAGAMAADIPLYPTGPAEDAAFIRFINATPDALQVVAQKGQPPL 99 M LR + S AALL A A AADI LYPTGPA+D+AFIRFINAT LQVVAQ+GQ PL Sbjct: 1 MIALRLMAGSVAALLIGAQAQAADIGLYPTGPAQDSAFIRFINATAAPLQVVAQEGQAPL 60 Query: 100 KLDAAKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPDPKG-IRQVTV 158 +LDAAKPVS FFPVQA S+IKGTL K L + V +PGEFATVV+ P G + VTV Sbjct: 61 QLDAAKPVSPFFPVQASSSIKGTLISGEKKLPMDVSVEPGEFATVVLTVQPDGRLAPVTV 120 Query: 159 QDNPDDFNGLKASLAFFNLDASCAAAALRPAGRTADLFKGVAQGSLQRRSINPVKLSVQL 218 ++ PDDFNGLKASLAFF+LDA C A+LRPAGRTADLFK + G+LQRRSINPV LSVQL Sbjct: 121 REQPDDFNGLKASLAFFSLDAGCVEASLRPAGRTADLFKAIPTGTLQRRSINPVSLSVQL 180 Query: 219 VCGGANTGPVLDLGELKAGERYSVLLLPSAGGPRLLAATDKLAN 262 VC A G LDLG+LKAGERYSVLL+PSA GPRLL+ATD L+N Sbjct: 181 VCANATVGAPLDLGDLKAGERYSVLLVPSATGPRLLSATDTLSN 224 >ref|NP_790868.1| cell morphology protein [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO54563.1| cell morphology protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EGH99381.1| cell morphology protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 224 Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 152/224 (67%), Positives = 175/224 (78%), Gaps = 2/224 (0%) Query: 41 MSVLRALTAS-AALLGCAGAMAADIPLYPTGPAEDAAFIRFINATPDALQVVAQKGQPPL 99 M LR + S AALL A AADI LYPTGPA+D+AFIRFINAT LQVVAQ+GQ PL Sbjct: 1 MIALRLMAGSVAALLIGVQAQAADIALYPTGPAQDSAFIRFINATAAPLQVVAQEGQAPL 60 Query: 100 KLDAAKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPDPKG-IRQVTV 158 +LDAAKPVS FFPVQA S+IKGTL K L + V +PGEFATVV+ P G + VTV Sbjct: 61 QLDAAKPVSLFFPVQASSSIKGTLISGEKKLPMDVSVEPGEFATVVLTTQPDGSLVPVTV 120 Query: 159 QDNPDDFNGLKASLAFFNLDASCAAAALRPAGRTADLFKGVAQGSLQRRSINPVKLSVQL 218 ++ PDDFNGLKASLAFF+LDA CA A+LRPAGRTAD+FK + G+LQRRSINPV LSVQL Sbjct: 121 REQPDDFNGLKASLAFFSLDAGCAQASLRPAGRTADVFKAIPTGTLQRRSINPVSLSVQL 180 Query: 219 VCGGANTGPVLDLGELKAGERYSVLLLPSAGGPRLLAATDKLAN 262 VC A G L+LG+LKAGERYS+LL+PSA GPRLL+ATD L+N Sbjct: 181 VCANATVGAPLNLGDLKAGERYSILLVPSATGPRLLSATDTLSN 224 >ref|ZP_03395440.1| cell morphology protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07231492.1| cell morphology protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07251886.1| cell morphology protein [Pseudomonas syringae pv. tomato K40] ref|ZP_07256902.1| cell morphology protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|EEB61679.1| cell morphology protein [Pseudomonas syringae pv. tomato T1] Length = 224 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 153/224 (68%), Positives = 175/224 (78%), Gaps = 2/224 (0%) Query: 41 MSVLRALTAS-AALLGCAGAMAADIPLYPTGPAEDAAFIRFINATPDALQVVAQKGQPPL 99 M LR + S AALL A AADI LYPTGPA+D+AFIRFINAT LQVVAQ+GQ PL Sbjct: 1 MIALRLMAGSVAALLVGVQAQAADIALYPTGPAQDSAFIRFINATAAPLQVVAQEGQAPL 60 Query: 100 KLDAAKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPDPKG-IRQVTV 158 +LDAAKPVS FFPVQA S+IKGTL K L + V +PGEFATVV+ P G + VTV Sbjct: 61 QLDAAKPVSLFFPVQASSSIKGTLISGEKKLPMDVSIEPGEFATVVLTTQPDGSLVPVTV 120 Query: 159 QDNPDDFNGLKASLAFFNLDASCAAAALRPAGRTADLFKGVAQGSLQRRSINPVKLSVQL 218 ++ PDDFNGLKASLAFF+LDA CA A+LRPAGRTAD+FK + G+LQRRSINPV LSVQL Sbjct: 121 REQPDDFNGLKASLAFFSLDAGCAQASLRPAGRTADVFKAIPTGTLQRRSINPVSLSVQL 180 Query: 219 VCGGANTGPVLDLGELKAGERYSVLLLPSAGGPRLLAATDKLAN 262 VC A G L+LG+LKAGERYSVLL+PSA GPRLL+ATD L+N Sbjct: 181 VCANATVGAPLNLGDLKAGERYSVLLVPSATGPRLLSATDTLSN 224 >gb|EGH07536.1| cell morphology protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 224 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 153/224 (68%), Positives = 173/224 (77%), Gaps = 2/224 (0%) Query: 41 MSVLRALTAS-AALLGCAGAMAADIPLYPTGPAEDAAFIRFINATPDALQVVAQKGQPPL 99 M LR + S AALL AADI LYPTGPA+D+AFIRFINAT LQVVAQ+GQ PL Sbjct: 1 MIALRLMAGSVAALLIGVQVQAADIGLYPTGPAQDSAFIRFINATAAPLQVVAQEGQAPL 60 Query: 100 KLDAAKPVSSFFPVQAKSTIKGTLTVAGKSLELGVQAKPGEFATVVVLPDPKG-IRQVTV 158 +LDAAKPVS FFPVQA S+IKGTL K L + V +PGEFATVV+ G + VTV Sbjct: 61 QLDAAKPVSLFFPVQASSSIKGTLISGEKKLPMDVSVEPGEFATVVLTVQADGSLAPVTV 120 Query: 159 QDNPDDFNGLKASLAFFNLDASCAAAALRPAGRTADLFKGVAQGSLQRRSINPVKLSVQL 218 ++ PDDFNGLKASLAFF+LDA CA A+LRPAGRTAD+FK + G+LQRRSINPV LSVQL Sbjct: 121 REQPDDFNGLKASLAFFSLDAGCAEASLRPAGRTADVFKEIPTGTLQRRSINPVSLSVQL 180 Query: 219 VCGGANTGPVLDLGELKAGERYSVLLLPSAGGPRLLAATDKLAN 262 VC A G LDLGELKAGERYSVLL+PSA GPRLL+ATD L+N Sbjct: 181 VCANATVGAPLDLGELKAGERYSVLLVPSATGPRLLSATDTLSN 224