BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1035.p (178 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEK80395.1| YhjQ [Herbaspirillum rubrisubalbicans M1] 298 2e-79 gb|EGH51428.1| cell morphology protein [Pseudomonas syringae Cit 7] 124 4e-27 ref|ZP_06459801.1| cell morphology protein [Pseudomonas syringae... 117 1e-24 ref|ZP_07003690.1| Chromosome (plasmid) partitioning protein Par... 116 1e-24 ref|ZP_03395446.1| cell morphology protein [Pseudomonas syringae... 114 4e-24 >gb|AEK80395.1| YhjQ [Herbaspirillum rubrisubalbicans M1] Length = 441 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 158/178 (88%), Positives = 166/178 (93%) Query: 1 MAATQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYLDQ 60 MAATQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYL+Q Sbjct: 264 MAATQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYLEQ 323 Query: 61 ALRAADQVLAVVTPDAGSFLALEHMRQVLHGRNNCRYVVNKYDASRSFSQDMLEVLKRWM 120 AL+AADQVLAVVTPDAGSFLALEHMRQ LHGRNNCRYVVNKYD SRSF QDMLEVL+RWM Sbjct: 324 ALQAADQVLAVVTPDAGSFLALEHMRQELHGRNNCRYVVNKYDDSRSFCQDMLEVLRRWM 383 Query: 121 GPRLAGVIALDHAISEGLAYGFNPLVKDGHSPAYEQLQAVSEVLRAAVAKAVATGARA 178 GPRLAGVIALDHAISEGLAYGFNPLVK GHS AY+QLQ +S+ LRA +AK+ G RA Sbjct: 384 GPRLAGVIALDHAISEGLAYGFNPLVKAGHSVAYDQLQGISDTLRATMAKSAVAGGRA 441 >gb|EGH51428.1| cell morphology protein [Pseudomonas syringae Cit 7] Length = 379 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 6/169 (3%) Query: 4 TQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYLDQALR 63 TQV+ + + + + DPHWL+RQ+ M L A DVV+LD+P G L QAL Sbjct: 198 TQVLPYGALPLDERRSLEHFQENDPHWLVRQIARMQLDARDVVILDVPCGDLRMLQQALT 257 Query: 64 AADQVLAVVTPDAGSFLALEHMR----QVLHGRN--NCRYVVNKYDASRSFSQDMLEVLK 117 AA QVL V+T DA ++ L+ M+ VL G C YV+N++DASR+FS+DM +VL Sbjct: 258 AASQVLVVLTADAACYVTLDQMQGWLEPVLAGSQPPACHYVINRFDASRTFSRDMYDVLA 317 Query: 118 RWMGPRLAGVIALDHAISEGLAYGFNPLVKDGHSPAYEQLQAVSEVLRA 166 R +G RL GV+ D+A++E LAYG N + SP + L+ +S VL A Sbjct: 318 RRLGERLLGVVRDDYALAEALAYGHNAVQVPSASPGTQDLRVLSNVLIA 366 >ref|ZP_06459801.1| cell morphology protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] ref|ZP_06479025.1| cell morphology protein [Pseudomonas syringae pv. aesculi str. 2250] gb|EGH04023.1| cell morphology protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 379 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 6/169 (3%) Query: 2 AATQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYLDQA 61 A TQ++ + + + + + D HWL+RQ+ M L A DVV+LD+P G L+QA Sbjct: 196 ADTQLLAYGALQLDERRSLERFQESDAHWLVRQIARMQLSARDVVVLDVPCGDLLMLEQA 255 Query: 62 LRAADQVLAVVTPDAGSFLALEHMR----QVLHGRNN--CRYVVNKYDASRSFSQDMLEV 115 L AA QVL V+T DA +L L+ M+ VL G C YV+N++DASR+FS+DM +V Sbjct: 256 LNAASQVLVVLTADAACYLTLDQMQGWLEPVLAGPQPPVCHYVINQFDASRTFSRDMRDV 315 Query: 116 LKRWMGPRLAGVIALDHAISEGLAYGFNPLVKDGHSPAYEQLQAVSEVL 164 + + +G RL G++ D+A++E LAYG N + SP + L+ +S +L Sbjct: 316 MAKRLGGRLLGIVHKDNALAEALAYGHNAVQVPSASPGTQDLRVLSHLL 364 >ref|ZP_07003690.1| Chromosome (plasmid) partitioning protein ParA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFI00894.1| Chromosome (plasmid) partitioning protein ParA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 379 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 6/169 (3%) Query: 2 AATQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYLDQA 61 A TQ++ + + + + + D HWL+RQ+ M L A DVV+LD+P G L+QA Sbjct: 196 ADTQLLAYGALQLDERRSLERFQESDAHWLVRQIARMQLSARDVVVLDVPCGDLLMLEQA 255 Query: 62 LRAADQVLAVVTPDAGSFLALEHMR----QVLHGRNN--CRYVVNKYDASRSFSQDMLEV 115 L AA QVL V+T DA +L L+ M+ VL G C YV+N++DASR+FS+DM +V Sbjct: 256 LNAASQVLVVLTADAACYLTLDQMQGWLEPVLAGPQPPVCHYVINQFDASRTFSRDMRDV 315 Query: 116 LKRWMGPRLAGVIALDHAISEGLAYGFNPLVKDGHSPAYEQLQAVSEVL 164 + + +G RL G++ D+A++E LAYG N + SP + L+ +S +L Sbjct: 316 MAKRLGGRLLGIVHKDNALAEALAYGHNAVQVPSASPGTQDLRVLSHLL 364 >ref|ZP_03395446.1| cell morphology protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07231486.1| cell morphology protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07251880.1| cell morphology protein [Pseudomonas syringae pv. tomato K40] ref|ZP_07256896.1| cell morphology protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|EEB61685.1| cell morphology protein [Pseudomonas syringae pv. tomato T1] Length = 379 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 6/169 (3%) Query: 2 AATQVVTHTVVAREGEAATAQLMAQDPHWLMRQLQAMHLQAGDVVLLDLPAGQTPYLDQA 61 A TQ++ + + + + + D HWL+RQ+ M L A DVV+LD+P G L+QA Sbjct: 196 ADTQLLAYGSLQLDERRSLERFQESDAHWLVRQIARMQLSARDVVILDVPCGDLLMLEQA 255 Query: 62 LRAADQVLAVVTPDAGSFLALEHMR----QVLHGRNN--CRYVVNKYDASRSFSQDMLEV 115 L AA QVL V+T DA +L L+ M+ VL G C YV+N++DASR+FS+DM +V Sbjct: 256 LNAASQVLVVLTADAACYLTLDQMQGWLEPVLAGPQPPVCHYVINQFDASRTFSRDMRDV 315 Query: 116 LKRWMGPRLAGVIALDHAISEGLAYGFNPLVKDGHSPAYEQLQAVSEVL 164 + + +G RL G++ D+A++E LAYG N + SP + L+ +S +L Sbjct: 316 MAKRLGGRLLGIVHKDNALAEALAYGHNAVEVPSASPGTQDLRVLSHLL 364