BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1024.p         (139 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003016234.1| hypothetical protein PC1_0643 [Pectobacteriu...   208   2e-52
ref|ZP_03826287.1| hypothetical protein PcarbP_06692 [Pectobacte...   205   2e-51
ref|ZP_03832419.1| hypothetical protein PcarcW_14107 [Pectobacte...   205   2e-51
ref|YP_003003516.1| hypothetical protein Dd1591_1170 [Dickeya ze...   203   8e-51
ref|YP_003334584.1| hypothetical protein Dd586_3043 [Dickeya dad...   197   3e-49

>ref|YP_003016234.1| hypothetical protein PC1_0643 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gb|ACT11698.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 128

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/127 (74%), Positives = 112/127 (88%)

Query: 1   MFSKQFEVDPKHIDFQGVVDGLYYPFYMEWTRHAFLKEALGIDIEEAFRQGQVFMVLEYS 60
           MFSK ++V+  HIDFQGVVDGLYYPFYMEWTRHAF+KEALGIDIEE F+QG+++MVLEY+
Sbjct: 1   MFSKHYDVEDSHIDFQGVVDGLYYPFYMEWTRHAFMKEALGIDIEEEFKQGKIYMVLEYT 60

Query: 61  LRFRKSLQKGDTMEVTCEVQKHEKRSRVNFVQQIKVGDVVYAEAVFVGACFMNNRPFVPE 120
           LRFRKSLQKGD +EVTC+++K+EKR+RVNFVQQIKVGDV YAEA FV  C  N RP +PE
Sbjct: 61  LRFRKSLQKGDRLEVTCQLEKNEKRNRVNFVQQIKVGDVTYAEATFVATCLTNGRPSMPE 120

Query: 121 AIAAALA 127
           A+  ALA
Sbjct: 121 AVTNALA 127


>ref|ZP_03826287.1| hypothetical protein PcarbP_06692 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 128

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/127 (74%), Positives = 111/127 (87%)

Query: 1   MFSKQFEVDPKHIDFQGVVDGLYYPFYMEWTRHAFLKEALGIDIEEAFRQGQVFMVLEYS 60
           MFSK +EV+  HIDFQGVVDGLYYPFYMEWTRHAF+KEALGIDIEE F+QG+++MVLEY+
Sbjct: 1   MFSKHYEVEDSHIDFQGVVDGLYYPFYMEWTRHAFMKEALGIDIEEEFKQGKIYMVLEYT 60

Query: 61  LRFRKSLQKGDTMEVTCEVQKHEKRSRVNFVQQIKVGDVVYAEAVFVGACFMNNRPFVPE 120
           LRFRKSLQKGD +EVTC+++K+EKR+RVNFVQQIKVG V YAEA FV  C  N RP +PE
Sbjct: 61  LRFRKSLQKGDQLEVTCQLEKNEKRNRVNFVQQIKVGGVTYAEATFVATCLTNGRPSMPE 120

Query: 121 AIAAALA 127
           A+  ALA
Sbjct: 121 AVVNALA 127


>ref|ZP_03832419.1| hypothetical protein PcarcW_14107 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 128

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/127 (73%), Positives = 110/127 (86%)

Query: 1   MFSKQFEVDPKHIDFQGVVDGLYYPFYMEWTRHAFLKEALGIDIEEAFRQGQVFMVLEYS 60
           MFSK ++V+  HIDFQGVVDGLYYPFYMEWTRHAF+KEALGIDIEE F+QG+++MVLEY+
Sbjct: 1   MFSKHYDVEDSHIDFQGVVDGLYYPFYMEWTRHAFMKEALGIDIEEEFKQGKIYMVLEYT 60

Query: 61  LRFRKSLQKGDTMEVTCEVQKHEKRSRVNFVQQIKVGDVVYAEAVFVGACFMNNRPFVPE 120
           LRFRKSLQKGD +EVTC+++K+EKR+RVNFVQ IKVG V YAEA FV  C  N RP +PE
Sbjct: 61  LRFRKSLQKGDRLEVTCQLEKNEKRNRVNFVQHIKVGGVTYAEATFVATCLTNGRPSMPE 120

Query: 121 AIAAALA 127
           A+  ALA
Sbjct: 121 AVTNALA 127


>ref|YP_003003516.1| hypothetical protein Dd1591_1170 [Dickeya zeae Ech1591]
 gb|ACT06037.1| conserved hypothetical protein [Dickeya zeae Ech1591]
          Length = 128

 Score =  203 bits (516), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 93/127 (73%), Positives = 110/127 (86%)

Query: 1   MFSKQFEVDPKHIDFQGVVDGLYYPFYMEWTRHAFLKEALGIDIEEAFRQGQVFMVLEYS 60
           MFSK ++V+  HIDFQGVVDGLYYPFYMEWTRHAF++EALGIDIEE F+QG+V+MVLEYS
Sbjct: 1   MFSKHYDVEDSHIDFQGVVDGLYYPFYMEWTRHAFMREALGIDIEEEFKQGKVYMVLEYS 60

Query: 61  LRFRKSLQKGDTMEVTCEVQKHEKRSRVNFVQQIKVGDVVYAEAVFVGACFMNNRPFVPE 120
           LRFRKSLQKGD +EVTC+V+K+EKR+RVNFVQQIKV  + YAEA FV  C +N RP +PE
Sbjct: 61  LRFRKSLQKGDRLEVTCQVEKNEKRNRVNFVQQIKVDGITYAEATFVATCLINGRPSMPE 120

Query: 121 AIAAALA 127
           A+   LA
Sbjct: 121 AVTNTLA 127


>ref|YP_003334584.1| hypothetical protein Dd586_3043 [Dickeya dadantii Ech586]
 gb|ACZ77878.1| conserved hypothetical protein [Dickeya dadantii Ech586]
          Length = 129

 Score =  197 bits (502), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 91/127 (71%), Positives = 108/127 (85%)

Query: 1   MFSKQFEVDPKHIDFQGVVDGLYYPFYMEWTRHAFLKEALGIDIEEAFRQGQVFMVLEYS 60
           MFSK ++V+  HIDFQGVVDGLYYPFYMEWTRHAF+KE+LGIDIEE F+QG+V+MVLEYS
Sbjct: 1   MFSKYYDVEDSHIDFQGVVDGLYYPFYMEWTRHAFMKESLGIDIEEEFKQGKVYMVLEYS 60

Query: 61  LRFRKSLQKGDTMEVTCEVQKHEKRSRVNFVQQIKVGDVVYAEAVFVGACFMNNRPFVPE 120
           LRFRKSLQKGD +EVTC+++K+EKR+RVNFVQ IKV    YAEA FV  C  + RP +PE
Sbjct: 61  LRFRKSLQKGDRLEVTCQLEKNEKRNRVNFVQHIKVDGTTYAEATFVATCLSHGRPSMPE 120

Query: 121 AIAAALA 127
           A+  ALA
Sbjct: 121 AVTNALA 127