BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1023.p         (169 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002871868.1| hypothetical protein PFLU2260 [Pseudomonas f...   211   2e-53
ref|YP_004234379.1| hypothetical protein Acav_1897 [Acidovorax a...   200   7e-50
ref|YP_001342651.1| hypothetical protein Mmwyl1_3817 [Marinomona...   181   4e-44
ref|YP_004109559.1| hypothetical protein Rpdx1_3248 [Rhodopseudo...   175   3e-42
ref|YP_001524209.1| hypothetical protein AZC_1293 [Azorhizobium ...   167   7e-40

>ref|YP_002871868.1| hypothetical protein PFLU2260 [Pseudomonas fluorescens SBW25]
 emb|CAY48495.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 133

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 103/131 (78%), Positives = 122/131 (93%)

Query: 35  MSMNSADFPLVWMNLTQQPGHDHEQDFTEFEANLQREEPFVLLTDTVPAEDHEHSAEEKK 94
           MS+NS+DFP VWM+LTQ+PGHDH++DF EFEANLQR EPFVLLTDT PAEDHEHS EEKK
Sbjct: 1   MSVNSSDFPFVWMSLTQEPGHDHQKDFAEFEANLQRGEPFVLLTDTAPAEDHEHSPEEKK 60

Query: 95  RTALWMKQNKHALRKLVLAMIVVEPNAARRVGFKAFAVVFAKFWGYPLLLAGSREQALQM 154
           RTALWMK++K  LRK VLAMI+VEPN+A+R+GF+AFAVVFAKFWGYPLLLA SR+QA++M
Sbjct: 61  RTALWMKKHKIELRKWVLAMILVEPNSAKRLGFRAFAVVFAKFWGYPLLLAASRQQAMEM 120

Query: 155 ARELLAQNGKA 165
           ARELLA++GK+
Sbjct: 121 ARELLAKDGKS 131


>ref|YP_004234379.1| hypothetical protein Acav_1897 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gb|ADX45812.1| hypothetical protein Acav_1897 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 134

 Score =  200 bits (508), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 97/131 (74%), Positives = 119/131 (90%), Gaps = 1/131 (0%)

Query: 35  MSMNSADFPLVWMNLTQQPGHDHEQDFTEFEANLQREEPFVLLTDTVP-AEDHEHSAEEK 93
           MSMNS++FPLVWMNL+++PGHDHE+DF EFEANLQR EPFV+L+D+ P  +DHEH+ EEK
Sbjct: 1   MSMNSSNFPLVWMNLSREPGHDHEKDFDEFEANLQRGEPFVILSDSAPEGDDHEHTPEEK 60

Query: 94  KRTALWMKQNKHALRKLVLAMIVVEPNAARRVGFKAFAVVFAKFWGYPLLLAGSREQALQ 153
           KRTALWMK++K  LR+LV AMI++EPNAA+R+GFKAFAVVFAKFWGYPLLLA SREQA++
Sbjct: 61  KRTALWMKKHKVELRRLVRAMILIEPNAAKRLGFKAFAVVFAKFWGYPLLLASSREQAIE 120

Query: 154 MARELLAQNGK 164
           MA ELLA +G+
Sbjct: 121 MAMELLATDGE 131


>ref|YP_001342651.1| hypothetical protein Mmwyl1_3817 [Marinomonas sp. MWYL1]
 gb|ABR72716.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
          Length = 135

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 84/134 (62%), Positives = 110/134 (82%)

Query: 35  MSMNSADFPLVWMNLTQQPGHDHEQDFTEFEANLQREEPFVLLTDTVPAEDHEHSAEEKK 94
           MSMNS+ FP VW++L  +PG D ++DF EFEANLQR EPFVLL+++ P  DHEHS EEKK
Sbjct: 1   MSMNSSQFPFVWISLDHKPGQDSQKDFDEFEANLQRGEPFVLLSNSAPTGDHEHSKEEKK 60

Query: 95  RTALWMKQNKHALRKLVLAMIVVEPNAARRVGFKAFAVVFAKFWGYPLLLAGSREQALQM 154
           RT+LWMK+NK  LRKLV+AMI++EPNAA+R+GFKAFA VF+KFWGYPL+LA S++ A+++
Sbjct: 61  RTSLWMKKNKAELRKLVIAMILIEPNAAKRLGFKAFAEVFSKFWGYPLILASSQDAAMEI 120

Query: 155 ARELLAQNGKAVGL 168
           A+ LL  + +   L
Sbjct: 121 AKGLLQTHNETSNL 134


>ref|YP_004109559.1| hypothetical protein Rpdx1_3248 [Rhodopseudomonas palustris DX-1]
 gb|ADU44826.1| hypothetical protein Rpdx1_3248 [Rhodopseudomonas palustris DX-1]
          Length = 134

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/126 (61%), Positives = 105/126 (83%)

Query: 35  MSMNSADFPLVWMNLTQQPGHDHEQDFTEFEANLQREEPFVLLTDTVPAEDHEHSAEEKK 94
           M M++++FP VWM+ T  PGHDH++DF  FE NL+R EPFV+LTD+ P+EDHEHS  E+K
Sbjct: 1   MPMDNSNFPFVWMSYTDGPGHDHDEDFASFEENLKRGEPFVVLTDSAPSEDHEHSQAERK 60

Query: 95  RTALWMKQNKHALRKLVLAMIVVEPNAARRVGFKAFAVVFAKFWGYPLLLAGSREQALQM 154
           RT+LWMK++K  LRKLVLAMI+VEP+AA+R+ FKAF + F KFWGYP+LLA SR++A+ +
Sbjct: 61  RTSLWMKKHKAELRKLVLAMIIVEPSAAKRLAFKAFGITFQKFWGYPMLLAASRDEAMAI 120

Query: 155 ARELLA 160
            R+LL+
Sbjct: 121 GRKLLS 126


>ref|YP_001524209.1| hypothetical protein AZC_1293 [Azorhizobium caulinodans ORS 571]
 dbj|BAF87291.1| hypothetical protein AZC_1293 [Azorhizobium caulinodans ORS 571]
          Length = 134

 Score =  167 bits (422), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 80/127 (62%), Positives = 102/127 (80%)

Query: 35  MSMNSADFPLVWMNLTQQPGHDHEQDFTEFEANLQREEPFVLLTDTVPAEDHEHSAEEKK 94
           M ++S +FP VWM+    P HDH++DF+E EANL+R  PFV+LTD+ PAEDHEHS EEKK
Sbjct: 1   MPLDSTNFPHVWMSYDHAPDHDHDEDFSELEANLKRGAPFVILTDSAPAEDHEHSHEEKK 60

Query: 95  RTALWMKQNKHALRKLVLAMIVVEPNAARRVGFKAFAVVFAKFWGYPLLLAGSREQALQM 154
           RT+LWMK++K  LR LVLA+IV+EP+AA+R+ FK F V FAKFWGYPL LA SRE+A+ +
Sbjct: 61  RTSLWMKKHKAELRSLVLALIVIEPSAAKRLAFKPFGVAFAKFWGYPLRLAASREEAMAI 120

Query: 155 ARELLAQ 161
           A ELL +
Sbjct: 121 AGELLLE 127