BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1022.p         (151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004234380.1| hypothetical protein Acav_1898 [Acidovorax a...   208   2e-52
ref|YP_001342650.1| hypothetical protein Mmwyl1_3816 [Marinomona...   166   1e-39
ref|ZP_01744872.1| hypothetical protein SSE37_22699 [Sagittula s...   114   6e-24
ref|YP_001041825.1| hypothetical protein Rsph17029_4115 [Rhodoba...   110   5e-23
ref|YP_001033909.1| hypothetical protein RSP_4279 [Rhodobacter s...   109   1e-22

>ref|YP_004234380.1| hypothetical protein Acav_1898 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gb|ADX45813.1| hypothetical protein Acav_1898 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 151

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 106/151 (70%), Positives = 125/151 (82%)

Query: 1   MSQQPSPSSASNRAMSPPNKTALFWLTTAVGAVLFVSFQLFFYVNDFVRAQGSAPAITFE 60
           M  QP      + A   PNK ALFWLTTA GAVLFV+FQLFFYVNDFVRAQG+ PAITF+
Sbjct: 1   MPLQPPLRPVQDLATGNPNKVALFWLTTAAGAVLFVTFQLFFYVNDFVRAQGATPAITFD 60

Query: 61  TKMLWMFSAYYGCWIVTVLLALSANRAARWSALILGSLLVVLNTLGGIADGLRDGWHIAF 120
             +LWMFSA+YGCW VTVL+AL   R A+W+AL+LGSLLV+LNTLGG++DGLRDGW++AF
Sbjct: 61  PGVLWMFSAFYGCWFVTVLIALIGTRKAQWAALVLGSLLVILNTLGGVSDGLRDGWYVAF 120

Query: 121 SAMFFISLPGVFAIATTWRNLNRKGDGHVDE 151
           SA+FFI+LPGVFAIATTWR++  KG GHV E
Sbjct: 121 SAVFFITLPGVFAIATTWRHIKNKGVGHVHE 151


>ref|YP_001342650.1| hypothetical protein Mmwyl1_3816 [Marinomonas sp. MWYL1]
 gb|ABR72715.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
          Length = 130

 Score =  166 bits (419), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 85/125 (68%), Positives = 100/125 (80%)

Query: 19  NKTALFWLTTAVGAVLFVSFQLFFYVNDFVRAQGSAPAITFETKMLWMFSAYYGCWIVTV 78
           N+  LFWLTTAVGAVLFV+ QLFF++ND+V AQG  P ITFET MLWMFSAYYG WIVTV
Sbjct: 6   NRITLFWLTTAVGAVLFVTLQLFFFLNDYVIAQGKGPNITFETNMLWMFSAYYGTWIVTV 65

Query: 79  LLALSANRAARWSALILGSLLVVLNTLGGIADGLRDGWHIAFSAMFFISLPGVFAIATTW 138
           LL L     ++W ALI+G+LLV LNTLGGI DG+RDG H+ FSA+FFI+LPGV A+  TW
Sbjct: 66  LLTLIGTTKSQWLALIIGTLLVALNTLGGIVDGMRDGAHVTFSALFFITLPGVCAMVATW 125

Query: 139 RNLNR 143
           R L +
Sbjct: 126 RALKK 130


>ref|ZP_01744872.1| hypothetical protein SSE37_22699 [Sagittula stellata E-37]
 gb|EBA09100.1| hypothetical protein SSE37_22699 [Sagittula stellata E-37]
          Length = 132

 Score =  114 bits (284), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 62/124 (50%), Positives = 83/124 (66%)

Query: 18  PNKTALFWLTTAVGAVLFVSFQLFFYVNDFVRAQGSAPAITFETKMLWMFSAYYGCWIVT 77
           P K AL WL  AVGA LFV+ Q F Y+N +V + G+  A+TF+   LW  S +YG W+V 
Sbjct: 6   PVKLALAWLIPAVGAALFVTIQCFSYLNAYVGSGGTMQAMTFDPAALWGVSIFYGAWVVP 65

Query: 78  VLLALSANRAARWSALILGSLLVVLNTLGGIADGLRDGWHIAFSAMFFISLPGVFAIATT 137
            LLAL+A RA  W+ LILG LL V++TL G+ DGLRDG H+    +  ++LPGV A+  T
Sbjct: 66  PLLALAARRATDWAMLILGGLLFVMSTLAGVFDGLRDGGHLVGLELLAVTLPGVVALIFT 125

Query: 138 WRNL 141
           WR++
Sbjct: 126 WRHI 129


>ref|YP_001041825.1| hypothetical protein Rsph17029_4115 [Rhodobacter sphaeroides ATCC
           17029]
 gb|ABN79189.1| hypothetical protein Rsph17029_4115 [Rhodobacter sphaeroides ATCC
           17029]
          Length = 132

 Score =  110 bits (276), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 59/124 (47%), Positives = 83/124 (66%)

Query: 18  PNKTALFWLTTAVGAVLFVSFQLFFYVNDFVRAQGSAPAITFETKMLWMFSAYYGCWIVT 77
           P K AL WL  AVGA LFV+ Q F Y+N +V + G+  A+TF+   LW  S +YG W++ 
Sbjct: 6   PVKLALAWLIPAVGAALFVTIQCFSYLNVYVGSGGTMQAMTFDPASLWGVSIFYGAWVLP 65

Query: 78  VLLALSANRAARWSALILGSLLVVLNTLGGIADGLRDGWHIAFSAMFFISLPGVFAIATT 137
            LLAL+A RA  W+ L+ G LL +++TL G+ DGLRDG H+A   +  ++LPGV A+  T
Sbjct: 66  PLLALAARRATDWAMLVFGGLLFIMSTLAGVFDGLRDGGHLAGLELLAVTLPGVVALLFT 125

Query: 138 WRNL 141
           WR++
Sbjct: 126 WRHI 129


>ref|YP_001033909.1| hypothetical protein RSP_4279 [Rhodobacter sphaeroides 2.4.1]
 gb|ABA81804.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 132

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/124 (46%), Positives = 82/124 (66%)

Query: 18  PNKTALFWLTTAVGAVLFVSFQLFFYVNDFVRAQGSAPAITFETKMLWMFSAYYGCWIVT 77
           P K AL WL  AVGA LFV+ Q F Y+N +V + G+  A+TF+   LW  S +YG W++ 
Sbjct: 6   PVKLALAWLIPAVGAALFVTIQCFSYLNVYVGSGGTMQAMTFDPASLWGVSIFYGAWVLP 65

Query: 78  VLLALSANRAARWSALILGSLLVVLNTLGGIADGLRDGWHIAFSAMFFISLPGVFAIATT 137
            LLAL+A RA  W+ L+ G LL +++TL G+ DGLRDG H+    +  ++LPGV A+  T
Sbjct: 66  PLLALAARRATDWAMLVFGGLLFIMSTLAGVFDGLRDGGHLVGLELLAVTLPGVVALLFT 125

Query: 138 WRNL 141
           WR++
Sbjct: 126 WRHI 129