BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1017.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07775417.1| putative transcriptional regulator [Pseudomon...   206   1e-51
gb|EGH46405.1| hypothetical protein PSYPI_30488 [Pseudomonas syr...   205   2e-51
ref|ZP_04588971.1| hypothetical protein POR16_16928 [Pseudomonas...   204   3e-51
gb|EGH52733.1| hypothetical protein PSYCIT7_14074 [Pseudomonas s...   202   1e-50
ref|YP_002872079.1| hypothetical protein PFLU2482A [Pseudomonas ...   199   1e-49

>ref|ZP_07775417.1| putative transcriptional regulator [Pseudomonas fluorescens WH6]
 gb|EFQ63146.1| putative transcriptional regulator [Pseudomonas fluorescens WH6]
          Length = 158

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 105/141 (74%), Positives = 122/141 (86%)

Query: 1   MIPREAIIADEALKEAEAICQTLREDDDGVRRDVLAHAGSRWALGILHALGVYGTLRHAE 60
           MIP   +   EAL +AE IC+TLREDDDGVRR+VLAHAGSRW+LGILHALGVYGT+RHAE
Sbjct: 1   MIPENEMTDQEALSQAETICRTLREDDDGVRREVLAHAGSRWSLGILHALGVYGTMRHAE 60

Query: 61  LKRQLSGVTQRMLTKTLRALERDGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWV 120
           +KRQ++GVTQRMLTKTLR++ERDGLL+R E  E P RVEYELT LG  LL+RMSPIWTWV
Sbjct: 61  IKRQMTGVTQRMLTKTLRSMERDGLLVRREFGEIPPRVEYELTPLGMGLLIRMSPIWTWV 120

Query: 121 VEHAEDFRQARRTFDSQDKQQ 141
           VE+ EDFR+ARR FDSQD ++
Sbjct: 121 VENVEDFRKARRIFDSQDDKK 141


>gb|EGH46405.1| hypothetical protein PSYPI_30488 [Pseudomonas syringae pv. pisi
           str. 1704B]
 gb|EGH47007.1| hypothetical protein PSYPI_33883 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 158

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 104/141 (73%), Positives = 122/141 (86%)

Query: 1   MIPREAIIADEALKEAEAICQTLREDDDGVRRDVLAHAGSRWALGILHALGVYGTLRHAE 60
           MIP   +   EAL +AE IC+TLREDDDGVRR+VLAHAGSRW+LGILHALGVYGT+RHAE
Sbjct: 1   MIPENEMTDQEALSQAETICRTLREDDDGVRREVLAHAGSRWSLGILHALGVYGTMRHAE 60

Query: 61  LKRQLSGVTQRMLTKTLRALERDGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWV 120
           +KRQ++GVTQRMLTKTLR++ERDGL++R E  E P RVEYELT LG  LL+RMSPIWTWV
Sbjct: 61  IKRQMTGVTQRMLTKTLRSMERDGLVVRREFGEIPPRVEYELTPLGMGLLIRMSPIWTWV 120

Query: 121 VEHAEDFRQARRTFDSQDKQQ 141
           VE+ EDFR+ARR FDSQD ++
Sbjct: 121 VENVEDFRKARRIFDSQDDKK 141


>ref|ZP_04588971.1| hypothetical protein POR16_16928 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gb|EGI03427.1| hypothetical protein POR16_16928 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 158

 Score =  204 bits (520), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 104/141 (73%), Positives = 123/141 (87%)

Query: 1   MIPREAIIADEALKEAEAICQTLREDDDGVRRDVLAHAGSRWALGILHALGVYGTLRHAE 60
           MIP   + + EAL +AE IC+TLREDDDGVRR+VLAHAGSRW+LGILHALGVYGT+RHAE
Sbjct: 1   MIPDNEMSSQEALSQAETICRTLREDDDGVRREVLAHAGSRWSLGILHALGVYGTMRHAE 60

Query: 61  LKRQLSGVTQRMLTKTLRALERDGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWV 120
           +KRQ++GVTQRMLTKTLRA+ERDGL+ R E  E P RVEYELT LG +LL+RMSPIWTWV
Sbjct: 61  IKRQMTGVTQRMLTKTLRAMERDGLVSRREFGEIPPRVEYELTPLGMELLIRMSPIWTWV 120

Query: 121 VEHAEDFRQARRTFDSQDKQQ 141
           VE+ EDFR+ARR FDSQ+ ++
Sbjct: 121 VENVEDFRKARRNFDSQNDKK 141


>gb|EGH52733.1| hypothetical protein PSYCIT7_14074 [Pseudomonas syringae Cit 7]
          Length = 147

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 103/141 (73%), Positives = 123/141 (87%)

Query: 1   MIPREAIIADEALKEAEAICQTLREDDDGVRRDVLAHAGSRWALGILHALGVYGTLRHAE 60
           MIP + +   EAL +AE IC+TLREDDDGVRR+VLAHAGSRW+LGILHALGVYGT+RHAE
Sbjct: 1   MIPEKEMTDQEALSQAETICRTLREDDDGVRREVLAHAGSRWSLGILHALGVYGTMRHAE 60

Query: 61  LKRQLSGVTQRMLTKTLRALERDGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWV 120
           +KRQ++GVTQRMLTKTLR++ERDGL++R E  E P RVEYELT LG  LL+RMSPIWTWV
Sbjct: 61  IKRQMTGVTQRMLTKTLRSMERDGLVVRREFGEIPPRVEYELTPLGMGLLIRMSPIWTWV 120

Query: 121 VEHAEDFRQARRTFDSQDKQQ 141
           VE+ +DFR+ARR FDSQD ++
Sbjct: 121 VENVDDFRKARRIFDSQDDKK 141


>ref|YP_002872079.1| hypothetical protein PFLU2482A [Pseudomonas fluorescens SBW25]
 emb|CAY48719.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 152

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 101/131 (77%), Positives = 118/131 (90%)

Query: 11  EALKEAEAICQTLREDDDGVRRDVLAHAGSRWALGILHALGVYGTLRHAELKRQLSGVTQ 70
           EAL +AE IC+TLREDDDGVRR+VLAHAGSRW+LGILHALGVYGT+RHAE+KRQ++GVTQ
Sbjct: 5   EALSQAETICRTLREDDDGVRREVLAHAGSRWSLGILHALGVYGTMRHAEIKRQMTGVTQ 64

Query: 71  RMLTKTLRALERDGLLLRHETDEKPLRVEYELTALGKDLLLRMSPIWTWVVEHAEDFRQA 130
           RMLTKTLR++ERDGL++R E  E P RVEYELT LG  LL+RMSPIWTWVVE+ EDFR+A
Sbjct: 65  RMLTKTLRSMERDGLVVRREFGEIPPRVEYELTPLGMGLLIRMSPIWTWVVENVEDFRKA 124

Query: 131 RRTFDSQDKQQ 141
           RR FDSQD ++
Sbjct: 125 RRIFDSQDDKK 135