BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1012.p (240 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08569461.1| threonine aldolase [Rheinheimera sp. A13L] >g... 280 1e-73 ref|YP_996459.1| threonine aldolase [Verminephrobacter eiseniae ... 252 4e-65 ref|ZP_04764044.1| Threonine aldolase [Acidovorax delafieldii 2A... 250 1e-64 ref|YP_969017.1| L-threonine aldolase [Acidovorax citrulli AAC00... 248 7e-64 ref|ZP_08873917.1| threonine aldolase [Verminephrobacter sp. At4] 247 1e-63 >ref|ZP_08569461.1| threonine aldolase [Rheinheimera sp. A13L] gb|EGM78966.1| threonine aldolase [Rheinheimera sp. A13L] Length = 358 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 141/190 (74%), Positives = 158/190 (83%), Gaps = 2/190 (1%) Query: 1 MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 60 M+DFRSDTVTQPS AMK AM+ APLGDDV +DPTVN LQ AA + GFEA LFAPSGTQ Sbjct: 1 MTDFRSDTVTQPSEAMKAAMLVAPLGDDVFQDDPTVNQLQRYAAELLGFEAALFAPSGTQ 60 Query: 61 SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 120 +NLIA+M HC+RGDEAIVGQQWHTYRWE GGMAVLGS+QPQPLE Q DGTLAL+ I A + Sbjct: 61 TNLIALMAHCQRGDEAIVGQQWHTYRWEGGGMAVLGSIQPQPLEHQADGTLALEHIRAAV 120 Query: 121 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVALAGG 180 KPDDPHFART+L+V+ENT GGK LPLAYM VAALAK GL+ HIDGARL NAAVALA Sbjct: 121 KPDDPHFARTKLIVMENTTGGKVLPLAYMNSVAALAKELGLKCHIDGARLMNAAVALATA 180 Query: 181 --GEPLMRAR 188 +P+ +AR Sbjct: 181 DDSDPIQKAR 190 >ref|YP_996459.1| threonine aldolase [Verminephrobacter eiseniae EF01-2] gb|ABM57441.1| L-threonine aldolase [Verminephrobacter eiseniae EF01-2] Length = 356 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 131/191 (68%), Positives = 152/191 (79%) Query: 1 MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 60 M DFRSDTVTQP+PAM+ AM +APLGDD +DP+VN LQ AA + GFEA LFAPSGTQ Sbjct: 1 MPDFRSDTVTQPTPAMRAAMFQAPLGDDAYADDPSVNALQEHAAEVLGFEAALFAPSGTQ 60 Query: 61 SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 120 +NLIA+ HC+RGDEAIVGQ WHTYRWEAGGMAVLGS+QPQPLE QPDGTL + DI A I Sbjct: 61 TNLIALWGHCQRGDEAIVGQNWHTYRWEAGGMAVLGSIQPQPLENQPDGTLRIADIAAAI 120 Query: 121 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVALAGG 180 KPDD HFARTRLVV+ENT GGK LP AY+ EVA L ++ GL H+DGAR+ NAA+A A Sbjct: 121 KPDDAHFARTRLVVLENTTGGKVLPPAYLAEVARLTRQHGLALHLDGARMFNAAIADAQR 180 Query: 181 GEPLMRARARA 191 + A+AR+ Sbjct: 181 SGTDVYAQARS 191 >ref|ZP_04764044.1| Threonine aldolase [Acidovorax delafieldii 2AN] gb|EER59154.1| Threonine aldolase [Acidovorax delafieldii 2AN] Length = 355 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 128/170 (75%), Positives = 143/170 (84%) Query: 1 MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 60 M DFRSDTVTQP+PAM+ AM APLGDDV G+DP+VN LQ AA + GFEA LFAPSGTQ Sbjct: 1 MPDFRSDTVTQPTPAMRAAMQAAPLGDDVFGDDPSVNALQEHAAQLLGFEAALFAPSGTQ 60 Query: 61 SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 120 +NLIA+M HC+RGDEAIVGQ WHTYRWEAGGMAVLGS+QPQP+E QPDGTL L DI A I Sbjct: 61 TNLIALMGHCQRGDEAIVGQSWHTYRWEAGGMAVLGSIQPQPVETQPDGTLRLADIAAAI 120 Query: 121 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARL 170 KPDDPHFARTRLVV+ENT GG+ LP Y+ EVA LA+ RGL H+DGARL Sbjct: 121 KPDDPHFARTRLVVLENTTGGQVLPTPYIAEVAQLARSRGLALHLDGARL 170 >ref|YP_969017.1| L-threonine aldolase [Acidovorax citrulli AAC00-1] gb|ABM31243.1| L-threonine aldolase [Acidovorax citrulli AAC00-1] Length = 354 Score = 248 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 129/191 (67%), Positives = 152/191 (79%), Gaps = 2/191 (1%) Query: 1 MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 60 M DFRSDTVTQP+ AM++AM+ APLGDDV G+DP+VN LQ+ AA + GF+A LFAPSGTQ Sbjct: 1 MHDFRSDTVTQPTAAMREAMLTAPLGDDVFGDDPSVNDLQNHAAELLGFDAALFAPSGTQ 60 Query: 61 SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 120 +NLIA+M HC+RGDEAIVGQ WHTYRWE GGMA LGS+ PQP+E + DGTL L DI A I Sbjct: 61 ANLIALMGHCQRGDEAIVGQSWHTYRWEGGGMATLGSIHPQPIENRADGTLCLRDIAAAI 120 Query: 121 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAV--ALA 178 KPDDPHFARTRLVV+ENT GG+ LP Y+ +VAALA+ R L H+DGARL NAA A+A Sbjct: 121 KPDDPHFARTRLVVLENTAGGQVLPNPYIADVAALARSRQLAMHLDGARLFNAATANAMA 180 Query: 179 GGGEPLMRARA 189 G + ARA Sbjct: 181 HGTDVYDEARA 191 >ref|ZP_08873917.1| threonine aldolase [Verminephrobacter sp. At4] Length = 356 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 129/194 (66%), Positives = 151/194 (77%) Query: 1 MSDFRSDTVTQPSPAMKQAMIEAPLGDDVMGEDPTVNLLQHTAATMFGFEAGLFAPSGTQ 60 M DFRSDTVTQP+ AM++AM +APLGDDV+ +DP+VN LQ AA + GFEA LFAPSGTQ Sbjct: 1 MPDFRSDTVTQPTSAMREAMFQAPLGDDVLADDPSVNALQEHAAELLGFEAALFAPSGTQ 60 Query: 61 SNLIAMMTHCRRGDEAIVGQQWHTYRWEAGGMAVLGSVQPQPLEQQPDGTLALDDIEAVI 120 +NLIA+ HC+RGDEAIVGQ WH+YRWEAGGMAVLGS+QPQP+E QPDGTL L DI A I Sbjct: 61 TNLIALWGHCQRGDEAIVGQSWHSYRWEAGGMAVLGSIQPQPVETQPDGTLRLADIAAAI 120 Query: 121 KPDDPHFARTRLVVIENTVGGKPLPLAYMQEVAALAKRRGLRAHIDGARLCNAAVALAGG 180 KPDDPHFARTRLVV+ENT GG+ LP Y+ EVA LA+ L H+DGAR+ NAA A Sbjct: 121 KPDDPHFARTRLVVLENTTGGQVLPPQYLAEVARLAREHALALHLDGARVFNAATVQAAR 180 Query: 181 GEPLMRARARARAR 194 + A AR+ R Sbjct: 181 SGSDVYAEARSLCR 194