BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.1011.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08873917.1| threonine aldolase [Verminephrobacter sp. At4]     117   4e-25
ref|ZP_08569461.1| threonine aldolase [Rheinheimera sp. A13L] >g...   115   2e-24
ref|YP_996459.1| threonine aldolase [Verminephrobacter eiseniae ...   113   9e-24
ref|ZP_04764044.1| Threonine aldolase [Acidovorax delafieldii 2A...   110   7e-23
ref|YP_969017.1| L-threonine aldolase [Acidovorax citrulli AAC00...   103   7e-21

>ref|ZP_08873917.1| threonine aldolase [Verminephrobacter sp. At4]
          Length = 356

 Score =  117 bits (294), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 65/126 (51%), Positives = 85/126 (67%), Gaps = 4/126 (3%)

Query: 1   MLGGAMRQAGVLAAAGLHALQHNVQRLADDHANADLLSRGLAEAASNNPKLRGAFHVQPA 60
           +LGG MRQAG+LAAAG +AL+H+V+RL++DHAN D L+RGLAEA   +P L+G  HVQP 
Sbjct: 231 ILGGGMRQAGMLAAAGHYALRHHVRRLSEDHANLDQLARGLAEAGRGHPVLQGRIHVQPW 290

Query: 61  QTNMVFTDVQADIAGNLIAHFAAHDITLQGGAYRSKEGMMNRIRWVTHLDVSQDDVVRAI 120
           QTN++FTD+QAD+A    A    + + + G  Y    G   R+RWVTHLDV   DV  A+
Sbjct: 291 QTNILFTDLQADVAPAFSAWLERNGVRVTGSLY----GGQTRLRWVTHLDVGPADVAAAL 346

Query: 121 KAAESF 126
                F
Sbjct: 347 DCVARF 352


>ref|ZP_08569461.1| threonine aldolase [Rheinheimera sp. A13L]
 gb|EGM78966.1| threonine aldolase [Rheinheimera sp. A13L]
          Length = 358

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/126 (46%), Positives = 84/126 (66%)

Query: 1   MLGGAMRQAGVLAAAGLHALQHNVQRLADDHANADLLSRGLAEAASNNPKLRGAFHVQPA 60
           MLGG MRQAGVLAAAGL+ALQHN+QRLA+DH +A  L+ GL   A+ +P L+G   +   
Sbjct: 231 MLGGGMRQAGVLAAAGLYALQHNIQRLAEDHQHAQQLADGLQHIAAEHPLLKGKLELVSV 290

Query: 61  QTNMVFTDVQADIAGNLIAHFAAHDITLQGGAYRSKEGMMNRIRWVTHLDVSQDDVVRAI 120
            TN++FTD+  ++A  L+A+ AA +I L    Y   +    R+RWVTHLD+   D+ + +
Sbjct: 291 HTNILFTDIAVEVAEPLLAYLAAQNIKLTSSNYNKADQNYKRVRWVTHLDIKTIDIEQTL 350

Query: 121 KAAESF 126
            A ++F
Sbjct: 351 AAVKNF 356


>ref|YP_996459.1| threonine aldolase [Verminephrobacter eiseniae EF01-2]
 gb|ABM57441.1| L-threonine aldolase [Verminephrobacter eiseniae EF01-2]
          Length = 356

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 4/126 (3%)

Query: 1   MLGGAMRQAGVLAAAGLHALQHNVQRLADDHANADLLSRGLAEAASNNPKLRGAFHVQPA 60
           +LGG MRQAG+LA+AG +ALQH+V+RLA+DHAN D L+RGL+ A  ++P L+G   VQP 
Sbjct: 231 ILGGGMRQAGILASAGHYALQHHVRRLAEDHANLDQLARGLSAAGRSHPVLQGRISVQPW 290

Query: 61  QTNMVFTDVQADIAGNLIAHFAAHDITLQGGAYRSKEGMMNRIRWVTHLDVSQDDVVRAI 120
           QTN++FTD+  D+A    A  A + + +    Y    G   R+RWVTHLDVS  DV   +
Sbjct: 291 QTNILFTDLHPDVAPAFSAWLADNGVRVTSSLY----GGQTRLRWVTHLDVSPSDVAATL 346

Query: 121 KAAESF 126
              E F
Sbjct: 347 DCVERF 352


>ref|ZP_04764044.1| Threonine aldolase [Acidovorax delafieldii 2AN]
 gb|EER59154.1| Threonine aldolase [Acidovorax delafieldii 2AN]
          Length = 355

 Score =  110 bits (275), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 62/126 (49%), Positives = 79/126 (62%), Gaps = 4/126 (3%)

Query: 1   MLGGAMRQAGVLAAAGLHALQHNVQRLADDHANADLLSRGLAEAASNNPKLRGAFHVQPA 60
           +LGGAMRQ G+LAAAG H LQH+V+RLADDHA    L+ GLAEA  ++P L+G   V  A
Sbjct: 231 ILGGAMRQCGLLAAAGQHVLQHHVRRLADDHALLRQLAAGLAEAGRSHPVLQGRLAVASA 290

Query: 61  QTNMVFTDVQADIAGNLIAHFAAHDITLQGGAYRSKEGMMNRIRWVTHLDVSQDDVVRAI 120
            TN++FTDV AD+A    A  A H + +    Y    G   R+RWV HLDV  +DV R +
Sbjct: 291 HTNILFTDVHADVASAFTAWLAQHGVRVTSSLY----GGQTRLRWVAHLDVGPEDVARTL 346

Query: 121 KAAESF 126
           +    F
Sbjct: 347 ECVRRF 352


>ref|YP_969017.1| L-threonine aldolase [Acidovorax citrulli AAC00-1]
 gb|ABM31243.1| L-threonine aldolase [Acidovorax citrulli AAC00-1]
          Length = 354

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 63/126 (50%), Positives = 80/126 (63%), Gaps = 4/126 (3%)

Query: 1   MLGGAMRQAGVLAAAGLHALQHNVQRLADDHANADLLSRGLAEAASNNPKLRGAFHVQPA 60
           MLGGAMRQ G+LAAAG +AL H+V+R+ADDHA    L+ GLAE   ++P LR    V  A
Sbjct: 231 MLGGAMRQIGMLAAAGRYALDHHVRRMADDHALLRSLAEGLAEVGRSHPVLRRRLSVASA 290

Query: 61  QTNMVFTDVQADIAGNLIAHFAAHDITLQGGAYRSKEGMMNRIRWVTHLDVSQDDVVRAI 120
            TN++FTDV +DIA  L+A  + H I +     RS  G   R+RWVTHLDV  +DV   +
Sbjct: 291 HTNIMFTDVHSDIAPALMAWLSQHGIYVT----RSLCGGQIRLRWVTHLDVGAEDVEHTL 346

Query: 121 KAAESF 126
              E F
Sbjct: 347 GCVEEF 352