BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1010.p (473 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08404216.1| threonine synthase [Rubrivivax benzoatilyticu... 666 0.0 ref|YP_001791056.1| threonine synthase [Leptothrix cholodnii SP-... 662 0.0 ref|YP_001020739.1| threonine synthase [Methylibium petroleiphil... 659 0.0 ref|YP_004619518.1| threonine synthase [Ramlibacter tataouinensi... 644 0.0 ref|YP_523170.1| threonine synthase [Rhodoferax ferrireducens T1... 639 0.0 >ref|ZP_08404216.1| threonine synthase [Rubrivivax benzoatilyticus JA2] gb|EGJ12549.1| threonine synthase [Rubrivivax benzoatilyticus JA2] Length = 472 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 331/472 (70%), Positives = 376/472 (79%), Gaps = 3/472 (0%) Query: 1 MNYISTRGDRTQRGFSEVLLEGLAPDGGLYVPLAYPRIDDATLQAWRTLSYPDLAFEIMA 60 M Y+STRGD T RGFS++LLEGLAPDGGLY+P YP++D ATLQ WR LSY DLAFEI++ Sbjct: 1 MKYLSTRGDLTPRGFSDILLEGLAPDGGLYLPTHYPQVDPATLQRWRGLSYADLAFEILS 60 Query: 61 LYVGDIPAGQLRSAIARTYTAEIFGSADIVPLRPLEDGLFVLGLSNGPTFAFKDVAMQLL 120 LY+ DIPA L+ + TYT ++FG+ +I PL+PL DGL + LSNGPT AFKD+AMQLL Sbjct: 61 LYIADIPAADLKRLVHATYTEQVFGTPEITPLKPLGDGLCLQALSNGPTLAFKDMAMQLL 120 Query: 121 GNLLDDELGRRGEQLNIVGATSGDTGSAAEYAMRGKKNIQVFMLSPHGRMSPFQQAQMFS 180 G+L + ELGRRGE LNI+GATSGDTGSAAEYAMRGKK + VFMLSPHGRMSPFQQAQMFS Sbjct: 121 GHLFEYELGRRGETLNILGATSGDTGSAAEYAMRGKKGVNVFMLSPHGRMSPFQQAQMFS 180 Query: 181 LQDRNIHNMAVEGSFDTCQDIVKAISSDLGFKRRFHIGTVNSINWARLLAQVVYYFAGYF 240 LQD NIHN+AVEG FD CQDIVKA+S+DL FKRR IGTVNSINWARLLAQVVYYFAGYF Sbjct: 181 LQDANIHNLAVEGVFDDCQDIVKAVSNDLEFKRRHKIGTVNSINWARLLAQVVYYFAGYF 240 Query: 241 QATRSNGERVSFAVPSGNFGNICAGHVARMMGLPIDKLVLATNENDVLDEFFRTGCYRPR 300 QAT+SN ERVSFAVPSGNFGNICAGHVARMMGLPI +LVLATNENDVLDEFFRTG YR R Sbjct: 241 QATKSNDERVSFAVPSGNFGNICAGHVARMMGLPIHRLVLATNENDVLDEFFRTGTYRVR 300 Query: 301 SSAETPATSSPSMDIAKASNLERFIFDVLGRDAQSVQQLFGEELAHHGKFILSKQEHERM 360 SAET TSSPSMDI+KASN ERF+FD+LGRDA ++LFG ++ G F L+ EH R Sbjct: 301 GSAETFETSSPSMDISKASNFERFVFDLLGRDAARTRELFGAGVSQQGGFTLAADEHARC 360 Query: 361 ADYGFVSGKSTHADRLATISQVWSGRSMMIDPHTADGVKVARHHRVQGVPTIVLETALPL 420 A +GFVSG+STHADRLATI+ W +++D HTADG+KVAR HR GVP IVLETALP Sbjct: 361 AGFGFVSGRSTHADRLATIAATWRETGVLVDTHTADGLKVAREHRDAGVPMIVLETALPA 420 Query: 421 KFEETMRAATGRGV---PRPAALADLEARPRLFAVMQASTEDIKERIATSCG 469 KF T+ A G PRPAALA LEA PR F V+ +K I G Sbjct: 421 KFAATITEALGADAPVPPRPAALAGLEALPRRFTVVPPDAATVKAFIEAHAG 472 >ref|YP_001791056.1| threonine synthase [Leptothrix cholodnii SP-6] gb|ACB34291.1| threonine synthase [Leptothrix cholodnii SP-6] Length = 472 Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 324/467 (69%), Positives = 374/467 (80%), Gaps = 2/467 (0%) Query: 1 MNYISTRGDRTQRGFSEVLLEGLAPDGGLYVPLAYPRIDDATLQAWRTLSYPDLAFEIMA 60 M YISTRGD+T+RGFSE+LLEGLAPDGGLY+P+AYP++D ATL WR LSY DLAFEI++ Sbjct: 1 MKYISTRGDKTERGFSEILLEGLAPDGGLYLPVAYPKVDAATLAKWRGLSYADLAFEILS 60 Query: 61 LYVGDIPAGQLRSAIARTYTAEIFGSADIVPLRPLEDGLFVLGLSNGPTFAFKDVAMQLL 120 LY+ DIPA LR + +TYT +FG+ IVPL+ LE GL + LSNGPT AFKD+AMQLL Sbjct: 61 LYIDDIPAADLRVLVDKTYTEAVFGTPQIVPLKSLEAGLCLEALSNGPTLAFKDMAMQLL 120 Query: 121 GNLLDDELGRRGEQLNIVGATSGDTGSAAEYAMRGKKNIQVFMLSPHGRMSPFQQAQMFS 180 GNL + ELGRRGE LNI+GATSGDTGSAAEYAMRGK + VFMLSPHGRMSPFQQAQMFS Sbjct: 121 GNLFEYELGRRGETLNILGATSGDTGSAAEYAMRGKAGVNVFMLSPHGRMSPFQQAQMFS 180 Query: 181 LQDRNIHNMAVEGSFDTCQDIVKAISSDLGFKRRFHIGTVNSINWARLLAQVVYYFAGYF 240 LQD NIHN+AVEG FD CQDIVKA+S+DL FKR++ IGTVNSINWARLLAQVVYYFAGYF Sbjct: 181 LQDANIHNIAVEGVFDDCQDIVKAVSNDLAFKRQYRIGTVNSINWARLLAQVVYYFAGYF 240 Query: 241 QATRSNGERVSFAVPSGNFGNICAGHVARMMGLPIDKLVLATNENDVLDEFFRTGCYRPR 300 QAT++ GE+VSFAVPSGNFGN+CAGHVARMMGLPI +LV+ATNEN+VL+EFF TG YR R Sbjct: 241 QATKAEGEQVSFAVPSGNFGNVCAGHVARMMGLPIAQLVVATNENNVLEEFFNTGTYRVR 300 Query: 301 SSAETPATSSPSMDIAKASNLERFIFDVLGRDAQSVQQLFGEELAHHGKFILSKQEHERM 360 SAET TSSPSMDI+KASN ERF+FD+LGR+ +Q LFG L+ G F LS E R+ Sbjct: 301 GSAETFETSSPSMDISKASNFERFVFDLLGREGARIQALFGAALSKEGAFTLSTDEFARV 360 Query: 361 ADYGFVSGKSTHADRLATISQVWSGRSMMIDPHTADGVKVARHHRVQGVPTIVLETALPL 420 YGFVSG+STHADRLATI W ++ID HTADG+KV R H GVP IVLETALP Sbjct: 361 PAYGFVSGRSTHADRLATIRDTWQRFGVLIDTHTADGLKVGREHVQPGVPMIVLETALPA 420 Query: 421 KFEETMRAATGRGV--PRPAALADLEARPRLFAVMQASTEDIKERIA 465 KFE T+ A G V PRPA L D+E+RP+ F VM ++ IA Sbjct: 421 KFEATITEALGADVKAPRPAGLVDIESRPKRFEVMPVDAARVQRYIA 467 >ref|YP_001020739.1| threonine synthase [Methylibium petroleiphilum PM1] gb|ABM94504.1| L-threonine synthase [Methylibium petroleiphilum PM1] Length = 470 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 322/468 (68%), Positives = 378/468 (80%) Query: 1 MNYISTRGDRTQRGFSEVLLEGLAPDGGLYVPLAYPRIDDATLQAWRTLSYPDLAFEIMA 60 MNY+STRGD T RGFS++LLEGLAPDGGLY+P YPR+D ATL WR LSY DLAFEI++ Sbjct: 1 MNYLSTRGDSTPRGFSDILLEGLAPDGGLYLPERYPRVDAATLARWRGLSYADLAFEILS 60 Query: 61 LYVGDIPAGQLRSAIARTYTAEIFGSADIVPLRPLEDGLFVLGLSNGPTFAFKDVAMQLL 120 LY+ DIPA LR+ I +TYT E+FG+ +I PL+PLE G+ + LSNGPT AFKD+AMQLL Sbjct: 61 LYITDIPADDLRTLIRKTYTREVFGTTEITPLKPLEPGVALQALSNGPTLAFKDMAMQLL 120 Query: 121 GNLLDDELGRRGEQLNIVGATSGDTGSAAEYAMRGKKNIQVFMLSPHGRMSPFQQAQMFS 180 G L + EL RRGE LNI+GATSGDTGSAAEYAMRGK+ ++VFMLSPHGRMSPFQQAQMFS Sbjct: 121 GQLFEYELARRGETLNILGATSGDTGSAAEYAMRGKQGVRVFMLSPHGRMSPFQQAQMFS 180 Query: 181 LQDRNIHNMAVEGSFDTCQDIVKAISSDLGFKRRFHIGTVNSINWARLLAQVVYYFAGYF 240 L D NIHN+AVEG FD CQDIVKA+S+DL FKRR+ IGTVNSINWARLLAQVVYYFAGYF Sbjct: 181 LPDANIHNLAVEGVFDDCQDIVKAVSNDLEFKRRWRIGTVNSINWARLLAQVVYYFAGYF 240 Query: 241 QATRSNGERVSFAVPSGNFGNICAGHVARMMGLPIDKLVLATNENDVLDEFFRTGCYRPR 300 QAT+SN ERVSF+VPSGNFGN+CAGHVARMMGLPI++LV+ATNENDVLDEFFRTG YR R Sbjct: 241 QATKSNDERVSFSVPSGNFGNVCAGHVARMMGLPIEQLVVATNENDVLDEFFRTGSYRVR 300 Query: 301 SSAETPATSSPSMDIAKASNLERFIFDVLGRDAQSVQQLFGEELAHHGKFILSKQEHERM 360 +A+T TSSPSMDI+KASN ERF+FD+LGRDA +QLFG+++A HG F L+ E R+ Sbjct: 301 GAADTHETSSPSMDISKASNFERFVFDLLGRDAARTRQLFGDDIARHGGFTLTPAEFARV 360 Query: 361 ADYGFVSGKSTHADRLATISQVWSGRSMMIDPHTADGVKVARHHRVQGVPTIVLETALPL 420 ++GFVSGKSTHADR+ATI + IDPHTADG+KV R + G P +VLETALP+ Sbjct: 361 REFGFVSGKSTHADRVATIRDTQQRFGVTIDPHTADGLKVGRAYVKPGTPLLVLETALPI 420 Query: 421 KFEETMRAATGRGVPRPAALADLEARPRLFAVMQASTEDIKERIATSC 468 KF T+ A G PRPA L LE PR F VM AS+ ++ I +C Sbjct: 421 KFAATILEALGHEPPRPAGLEGLEQLPRRFKVMPASSATVQAYIVENC 468 >ref|YP_004619518.1| threonine synthase [Ramlibacter tataouinensis TTB310] gb|AEG93499.1| Candidate threonine synthase [Ramlibacter tataouinensis TTB310] Length = 473 Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 317/468 (67%), Positives = 369/468 (78%) Query: 1 MNYISTRGDRTQRGFSEVLLEGLAPDGGLYVPLAYPRIDDATLQAWRTLSYPDLAFEIMA 60 M Y+STRG ++ FSE+LLEGLAPDGGLY+P YPR+D ATL WR L+Y DLAFEI++ Sbjct: 1 MLYLSTRGHPERKRFSEILLEGLAPDGGLYLPERYPRVDAATLSRWRGLAYADLAFEILS 60 Query: 61 LYVGDIPAGQLRSAIARTYTAEIFGSADIVPLRPLEDGLFVLGLSNGPTFAFKDVAMQLL 120 LY+ DIPA LR+ RTYT E+FG+ IVPLR LE+GL++ LSNGPT AFKD+AMQLL Sbjct: 61 LYIDDIPADDLRAICRRTYTEEVFGTPQIVPLRKLEEGLYLQALSNGPTLAFKDMAMQLL 120 Query: 121 GNLLDDELGRRGEQLNIVGATSGDTGSAAEYAMRGKKNIQVFMLSPHGRMSPFQQAQMFS 180 G L + ELGRRGE+LNI+GATSGDTGSAAEYAMRGK+ ++VFM SPHGRMSPFQQAQMFS Sbjct: 121 GQLFEYELGRRGEELNILGATSGDTGSAAEYAMRGKRGVRVFMTSPHGRMSPFQQAQMFS 180 Query: 181 LQDRNIHNMAVEGSFDTCQDIVKAISSDLGFKRRFHIGTVNSINWARLLAQVVYYFAGYF 240 LQD NIHN+AV+G FD CQDIVKA+S+DL FKRR+ IGTVNSINWARL+AQVVYYFAGYF Sbjct: 181 LQDANIHNLAVQGVFDDCQDIVKAVSNDLAFKRRYRIGTVNSINWARLVAQVVYYFAGYF 240 Query: 241 QATRSNGERVSFAVPSGNFGNICAGHVARMMGLPIDKLVLATNENDVLDEFFRTGCYRPR 300 QAT N E+VSFAVPSGNFGNICAGHVARMM LPI +LVLATNENDVLDEFFRTG YR R Sbjct: 241 QATGGNHEKVSFAVPSGNFGNICAGHVARMMSLPIARLVLATNENDVLDEFFRTGTYRVR 300 Query: 301 SSAETPATSSPSMDIAKASNLERFIFDVLGRDAQSVQQLFGEELAHHGKFILSKQEHERM 360 S +T TSSPSMDI+KASN ERF+FD+LGRDA +QLFGE+L G+F L+ + Sbjct: 301 GSRDTYETSSPSMDISKASNFERFVFDLLGRDASRTRQLFGEQLPAQGRFELAGEVGAAR 360 Query: 361 ADYGFVSGKSTHADRLATISQVWSGRSMMIDPHTADGVKVARHHRVQGVPTIVLETALPL 420 YGF SG+STHADRLAT+ W +MID HTADG+KVAR HR G+P +VLETALP+ Sbjct: 361 ERYGFASGRSTHADRLATLRDTWQRHGVMIDTHTADGLKVAREHRQPGIPMVVLETALPI 420 Query: 421 KFEETMRAATGRGVPRPAALADLEARPRLFAVMQASTEDIKERIATSC 468 KF T+ A GR RPA +E P+ AV+ A E +K IA C Sbjct: 421 KFAATVVEALGREPQRPARFEGIERLPKRVAVVPADAEAVKRYIAQHC 468 >ref|YP_523170.1| threonine synthase [Rhodoferax ferrireducens T118] gb|ABD69639.1| L-threonine synthase [Rhodoferax ferrireducens T118] Length = 475 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 316/475 (66%), Positives = 372/475 (78%), Gaps = 6/475 (1%) Query: 1 MNYISTRGDRTQRGFSEVLLEGLAPDGGLYVPLAYPRIDDATLQAWRTL----SYPDLAF 56 MNYISTRGD +++ F E+LLEGLAPDGGLY+P +YP +DDATL WR + Y +LAF Sbjct: 1 MNYISTRGDMSRKHFCEILLEGLAPDGGLYLPESYPHVDDATLTRWRAVYHQEGYAELAF 60 Query: 57 EIMALYVGDIPAGQLRSAIARTYTAEIFGSADIVPLRPLEDGLFVLGLSNGPTFAFKDVA 116 EI++LY+ DIPA LRS +TYTAE+FG+ +IVPLR LE+GL++ LSNGPT AFKD+A Sbjct: 61 EILSLYIDDIPAPDLRSICHKTYTAEVFGTGEIVPLRHLENGLWLEALSNGPTLAFKDLA 120 Query: 117 MQLLGNLLDDELGRRGEQLNIVGATSGDTGSAAEYAMRGKKNIQVFMLSPHGRMSPFQQA 176 MQLLGNL + EL RRGE+LNI+GATSGDTGSAAEYAMRGKK ++VFM SP RMSPFQQA Sbjct: 121 MQLLGNLFEYELARRGEELNILGATSGDTGSAAEYAMRGKKGVRVFMTSPANRMSPFQQA 180 Query: 177 QMFSLQDRNIHNMAVEGSFDTCQDIVKAISSDLGFKRRFHIGTVNSINWARLLAQVVYYF 236 QMFSL D NIHN+AV+G FD CQD+VKA+S+DL FKR++ IGTVNSINWARLLAQVVYYF Sbjct: 181 QMFSLLDENIHNIAVDGVFDDCQDMVKAVSNDLEFKRKYKIGTVNSINWARLLAQVVYYF 240 Query: 237 AGYFQATRSNGERVSFAVPSGNFGNICAGHVARMMGLPIDKLVLATNENDVLDEFFRTGC 296 AGYFQAT +N E+VSF VPSGNFGN+CAGHVARMMGLPI KLV+ATNENDVLDEFF+TG Sbjct: 241 AGYFQATETNAEKVSFTVPSGNFGNVCAGHVARMMGLPIAKLVVATNENDVLDEFFKTGV 300 Query: 297 YRPRSSAETPATSSPSMDIAKASNLERFIFDVLGRDAQSVQQLFGEELAHHGKFILSKQE 356 YR RSSA+T TSSPSMDI+KASN ERF+FD+LGRD V+ LFG+ LA G+F LS+ Sbjct: 301 YRVRSSADTHETSSPSMDISKASNFERFVFDLLGRDGARVKALFGDALARTGRFDLSQHP 360 Query: 357 --HERMADYGFVSGKSTHADRLATISQVWSGRSMMIDPHTADGVKVARHHRVQGVPTIVL 414 ++ YGF SG+STHADRLATI + M+ID HTADGVKVAR H GVP IV+ Sbjct: 361 AFNQSTLRYGFQSGQSTHADRLATIKDSFERFGMLIDTHTADGVKVAREHLQPGVPMIVM 420 Query: 415 ETALPLKFEETMRAATGRGVPRPAALADLEARPRLFAVMQASTEDIKERIATSCG 469 ETALP+KF T+ A GR RPA +EA P+ M A E +K IA C Sbjct: 421 ETALPIKFAATIVEALGREPDRPAKFVGIEALPKRVTRMAADVEAVKAYIAEHCA 475