BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.1007.p (463 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002908589.1| putative FAD dependent oxidoreductase [Burkh... 702 0.0 ref|ZP_03264288.1| FAD dependent oxidoreductase [Burkholderia sp... 541 e-151 ref|YP_555968.1| putative FAD dependent oxidoreductase [Burkhold... 536 e-150 ref|YP_002822888.1| oxidoreductase [Sinorhizobium fredii NGR234]... 524 e-146 ref|YP_003522349.1| SardH [Pantoea ananatis LMG 20103] >gi|29115... 510 e-142 >ref|YP_002908589.1| putative FAD dependent oxidoreductase [Burkholderia glumae BGR1] gb|ACR31354.1| Putative FAD dependent oxidoreductase [Burkholderia glumae BGR1] Length = 442 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 340/442 (76%), Positives = 389/442 (88%) Query: 22 MLRVEEVYDSPEFVSEVDVVVIGAGIVGTSIGYELARRGISVAILEKGIVGGEQSGRNWG 81 ML VEEVYD+PEF VDVVVIGAGIVGT+ YELARRG+SVA+++KG+VGGEQSGRNWG Sbjct: 1 MLLVEEVYDTPEFSGAVDVVVIGAGIVGTATAYELARRGVSVALIDKGMVGGEQSGRNWG 60 Query: 82 WVRQQNRDLFELPLAMRSLRRWNELRDEIQIDLGFRREGILYATNEEKDLAKWSAWGQRA 141 WVRQQNRDLFELPLAMRSLRRW+ELRDEIQIDLGFRREGILYA+N+ K +A+W AW ++A Sbjct: 61 WVRQQNRDLFELPLAMRSLRRWSELRDEIQIDLGFRREGILYASNDAKAIARWEAWCRQA 120 Query: 142 KEIGFVSHILSASEVKARTPSGGPGYKGGVWSPTDGRAEPSRAAPALAEGAKRLGAHLYQ 201 +EIGFVSH+LSA E+ +R P GGP Y GGVWSP DGRAEPSRAA ALAEGAKR GA LYQ Sbjct: 121 REIGFVSHLLSAHEINSRAPQGGPRYAGGVWSPDDGRAEPSRAASALAEGAKRRGAVLYQ 180 Query: 202 QCAVRGLETSGGRLSGVWTERGLIKASTVVCAGGAWSGRLCRRHGIAFPVVNVVGTTMRT 261 CA RGLE S GR+ GVWTERGLIKA VVCAGGAWS R C+RH I PVVNV+GTTMRT Sbjct: 181 NCAARGLELSAGRVGGVWTERGLIKAGAVVCAGGAWSSRFCKRHEIDLPVVNVIGTTMRT 240 Query: 262 SVAPEVVSGCFSGPGFALRRRLDGAYSVAVPGFGRIDLAPVGLKNGLQYYRNYKNDIGKK 321 S A V++GCFSGPGFA+RRRLDG Y++AVPG+GRIDLAP+GL+N L+Y RNY+N+IGKK Sbjct: 241 SAAASVINGCFSGPGFAIRRRLDGGYTLAVPGYGRIDLAPLGLRNALRYRRNYRNEIGKK 300 Query: 322 LTYRLSRAWMEGPEATSTWAFDQVSPFERCRVLDPRPDPDFARRALDNVKRAIPQLSELR 381 L YRL++ W +GPEA+++W FDQVSPFERCRVLDP+PD +F + ALDNV+RAIPQLSELR Sbjct: 301 LKYRLAKPWFDGPEASASWQFDQVSPFERCRVLDPKPDLEFVKIALDNVRRAIPQLSELR 360 Query: 382 VAYAWAGAIDTTPDLIPVISDVAALPGLYLATGFSGHGFALGPAAGELVADMVTGASPMI 441 V +AWAGAIDTTPDLIP++SD+AALPG Y+ATGFSGHGFALGPAAGELVADMV GA P+I Sbjct: 361 VVHAWAGAIDTTPDLIPIVSDIAALPGFYVATGFSGHGFALGPAAGELVADMVMGAKPLI 420 Query: 442 DVSPYRLSRFNDGTSLKVPEMM 463 D SPYRLSRF DGT +K PEMM Sbjct: 421 DTSPYRLSRFTDGTFIKTPEMM 442 >ref|ZP_03264288.1| FAD dependent oxidoreductase [Burkholderia sp. H160] gb|EEA04132.1| FAD dependent oxidoreductase [Burkholderia sp. H160] Length = 442 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 262/442 (59%), Positives = 338/442 (76%) Query: 22 MLRVEEVYDSPEFVSEVDVVVIGAGIVGTSIGYELARRGISVAILEKGIVGGEQSGRNWG 81 MLR++EV +S F DV VIG GI+G S YELARRG+SV +LEKGI+G EQSGRNWG Sbjct: 1 MLRIDEVSNSEGFPDRCDVAVIGGGIIGVSTAYELARRGVSVVLLEKGIIGAEQSGRNWG 60 Query: 82 WVRQQNRDLFELPLAMRSLRRWNELRDEIQIDLGFRREGILYATNEEKDLAKWSAWGQRA 141 WVRQQNRDL+ELPLAM+SL+RW EL DE+ D+GFRR GILY + + D+A+W W +A Sbjct: 61 WVRQQNRDLYELPLAMQSLKRWGELSDELGEDIGFRRSGILYGSEQSADVAQWETWLGKA 120 Query: 142 KEIGFVSHILSASEVKARTPSGGPGYKGGVWSPTDGRAEPSRAAPALAEGAKRLGAHLYQ 201 + +GF S +LSA E+ AR P G + GGVWS +DGRAEPSRAAPA+A GA+RLGA ++Q Sbjct: 121 RALGFDSQLLSARELAARVPHGQAKWAGGVWSHSDGRAEPSRAAPAIARGAQRLGARVHQ 180 Query: 202 QCAVRGLETSGGRLSGVWTERGLIKASTVVCAGGAWSGRLCRRHGIAFPVVNVVGTTMRT 261 CAVRGL+ S GR+SGVWTERG I AS+VV AGGAWS CR HGI P VNV+GT +RT Sbjct: 181 TCAVRGLDVSAGRISGVWTERGRIGASSVVLAGGAWSALFCRHHGIDLPAVNVIGTALRT 240 Query: 262 SVAPEVVSGCFSGPGFALRRRLDGAYSVAVPGFGRIDLAPVGLKNGLQYYRNYKNDIGKK 321 + AP V+ GCFSGP FA+RRRLDG Y++AVPG+GR+++AP L++ +++ + +++ + KK Sbjct: 241 AEAPAVIDGCFSGPNFAMRRRLDGGYTIAVPGYGRMEIAPQNLRHAVKFRQMFRSKLNKK 300 Query: 322 LTYRLSRAWMEGPEATSTWAFDQVSPFERCRVLDPRPDPDFARRALDNVKRAIPQLSELR 381 L +R+++ + GPE ++ W D++SPFE RVL+P PD ++ RAL NV P+LS LR Sbjct: 301 LKFRIAQPFFGGPEGSANWRHDELSPFEVTRVLNPAPDAEWPTRALQNVATVFPELSGLR 360 Query: 382 VAYAWAGAIDTTPDLIPVISDVAALPGLYLATGFSGHGFALGPAAGELVADMVTGASPMI 441 +A+AWAGAIDTTPDL+PV+S V + PGL +A+GFSGHGF LGP AG LV+ +VT + I Sbjct: 361 IAHAWAGAIDTTPDLVPVMSRVESKPGLVIASGFSGHGFGLGPGAGMLVSRIVTNDATGI 420 Query: 442 DVSPYRLSRFNDGTSLKVPEMM 463 D+ PYRL+RF DGT L PEMM Sbjct: 421 DIQPYRLTRFTDGTRLASPEMM 442 >ref|YP_555968.1| putative FAD dependent oxidoreductase [Burkholderia xenovorans LB400] gb|ABE36618.1| Putative FAD dependent oxidoreductase [Burkholderia xenovorans LB400] Length = 442 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 258/442 (58%), Positives = 341/442 (77%) Query: 22 MLRVEEVYDSPEFVSEVDVVVIGAGIVGTSIGYELARRGISVAILEKGIVGGEQSGRNWG 81 MLR++EV +S F DV VIG GI+G S YELARRGISVA+LEKGI+G EQSGRNWG Sbjct: 1 MLRIDEVPNSDGFPDRCDVAVIGGGIIGVSTAYELARRGISVALLEKGIIGAEQSGRNWG 60 Query: 82 WVRQQNRDLFELPLAMRSLRRWNELRDEIQIDLGFRREGILYATNEEKDLAKWSAWGQRA 141 WVRQQNRDL+ELPLAM+SL+RW EL DE+ ++GFR+ GILY + + D+A+W W +A Sbjct: 61 WVRQQNRDLYELPLAMQSLKRWAELSDELGEEIGFRKSGILYGSEQPADVAQWETWLGKA 120 Query: 142 KEIGFVSHILSASEVKARTPSGGPGYKGGVWSPTDGRAEPSRAAPALAEGAKRLGAHLYQ 201 + +GF S +LSA E+ AR P+G + GGVWS +DGRAEPS+AAPA+A GA+RLGA ++Q Sbjct: 121 RALGFDSQLLSARELAARVPNGRAKWAGGVWSYSDGRAEPSKAAPAIARGAQRLGARVHQ 180 Query: 202 QCAVRGLETSGGRLSGVWTERGLIKASTVVCAGGAWSGRLCRRHGIAFPVVNVVGTTMRT 261 CAVRGL+ S GR+SGVWTERGLI A +VV AGGAWS CR HGI P VNV+GT +RT Sbjct: 181 ICAVRGLDISAGRVSGVWTERGLIAADSVVLAGGAWSALFCRHHGIDLPAVNVIGTALRT 240 Query: 262 SVAPEVVSGCFSGPGFALRRRLDGAYSVAVPGFGRIDLAPVGLKNGLQYYRNYKNDIGKK 321 + AP V+ GCFSGP FA+RRRLDG Y++AVPG+GR+++AP L++ +++ + +++ + KK Sbjct: 241 AEAPAVIDGCFSGPNFAMRRRLDGGYTIAVPGYGRMEIAPQNLRHAVKFRKMFRSKLSKK 300 Query: 322 LTYRLSRAWMEGPEATSTWAFDQVSPFERCRVLDPRPDPDFARRALDNVKRAIPQLSELR 381 L +R+++ + GPE ++TW D ++PFE RV +P PD ++ RA+D+V P LS LR Sbjct: 301 LKFRVAQRFFGGPEGSATWRHDDITPFEEMRVFNPSPDAEWPTRAIDHVAAVFPDLSGLR 360 Query: 382 VAYAWAGAIDTTPDLIPVISDVAALPGLYLATGFSGHGFALGPAAGELVADMVTGASPMI 441 VA+AWAGAIDTTPDL+PV+S V ++PGL +A+GFSGHGF LGP AG LV+ +VT I Sbjct: 361 VAHAWAGAIDTTPDLVPVMSRVDSMPGLVIASGFSGHGFGLGPGAGMLVSRIVTDDVSGI 420 Query: 442 DVSPYRLSRFNDGTSLKVPEMM 463 D++P+RL+RF+DGT L PE+M Sbjct: 421 DLNPFRLTRFSDGTRLASPELM 442 >ref|YP_002822888.1| oxidoreductase [Sinorhizobium fredii NGR234] gb|ACP22135.1| putative oxidoreductase [Sinorhizobium fredii NGR234] Length = 453 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 253/440 (57%), Positives = 325/440 (73%), Gaps = 1/440 (0%) Query: 25 VEEVYDSPEFVSEVDVVVIGAGIVGTSIGYELARRGISVAILEKGIVGGEQSGRNWGWVR 84 V++V +S F ++VDVVVIGAGIVGT YEL+R+G+SVA+LEKGIVGGEQS RNWGWVR Sbjct: 14 VQKVRNSASFPTQVDVVVIGAGIVGTCTAYELSRQGVSVALLEKGIVGGEQSSRNWGWVR 73 Query: 85 QQNRDLFELPLAMRSLRRWNELRDEIQIDLGFRREGILYATNEEKDLAKWSAWGQRAKEI 144 QQNRDL EL LAM SLRRW EL EI DLGFRR GILY + E D+A+W WGQ A+ Sbjct: 74 QQNRDLHELALAMYSLRRWEELGTEIGRDLGFRRSGILYCSKNEADVARWEKWGQAARVQ 133 Query: 145 GFVSHILSASEVKARTPSGGPGYKGGVWSPTDGRAEPSRAAPALAEGAKRLGAHLYQQCA 204 GF S IL+ASE R G + GGVWSP+DGRAEPS A PA+AE AK G L+Q CA Sbjct: 134 GFHSQILTASEANERASGGTSSWVGGVWSPSDGRAEPSLAVPAVAEAAKEKGVSLHQNCA 193 Query: 205 VRGLETSGGRLSGVWTERGLIKASTVVCAGGAWSGRLCRRHGIAFPVVNVVGTTMRTSVA 264 VRGL+ + GR++GVWTERG++KASTVVCAGGAW+ R R+GI PV N+ GT ++T+ A Sbjct: 194 VRGLDITNGRVTGVWTERGIVKASTVVCAGGAWASRFSHRYGIELPVANIAGTAIKTTPA 253 Query: 265 PEVV-SGCFSGPGFALRRRLDGAYSVAVPGFGRIDLAPVGLKNGLQYYRNYKNDIGKKLT 323 PE+V +GC S F LRRR+DG+Y++AVPG G +D+ P G++ ++Y Y++ IGKKL Sbjct: 254 PEIVQAGCLSASNFVLRRRIDGSYTIAVPGHGTLDITPRGMRYAFKFYEMYRSKIGKKLK 313 Query: 324 YRLSRAWMEGPEATSTWAFDQVSPFERCRVLDPRPDPDFARRALDNVKRAIPQLSELRVA 383 YRL+ ++ GP+A +W D++SPFE+ R+LDP PD + + A+ N++ P L + V Sbjct: 314 YRLNSSFWNGPDAFGSWENDEISPFEKSRILDPAPDAELVKLAVKNLESEYPTLKGIGVE 373 Query: 384 YAWAGAIDTTPDLIPVISDVAALPGLYLATGFSGHGFALGPAAGELVADMVTGASPMIDV 443 AW G IDT+PDL+PVIS V LPG +A GFSGHGFA+GP AG LV+++V P+ D+ Sbjct: 374 RAWGGLIDTSPDLVPVISRVEELPGYVIAAGFSGHGFAIGPGAGRLVSEIVLNKEPLTDI 433 Query: 444 SPYRLSRFNDGTSLKVPEMM 463 SPYRLSRF DG++++ PEMM Sbjct: 434 SPYRLSRFGDGSAIRRPEMM 453 >ref|YP_003522349.1| SardH [Pantoea ananatis LMG 20103] gb|ADD79221.1| SardH [Pantoea ananatis LMG 20103] Length = 442 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 250/441 (56%), Positives = 327/441 (74%), Gaps = 1/441 (0%) Query: 23 LRVEEVYDSPEFVSEVDVVVIGAGIVGTSIGYELARRGISVAILEKGIVGGEQSGRNWGW 82 ++V+ V DS F + VDVVVIG GIVGTS YELA++G+SV + EKG++ GEQSGRNWGW Sbjct: 3 IKVDSVNDSSVFPTSVDVVVIGGGIVGTSTAYELAKQGVSVTLFEKGVIAGEQSGRNWGW 62 Query: 83 VRQQNRDLFELPLAMRSLRRWNELRDEIQIDLGFRREGILYATNEEKDLAKWSAWGQRAK 142 VRQQNRDL ELP+A+RSL+RW+EL EI +DLGFRR GILY T + DLA+W WGQ+AK Sbjct: 63 VRQQNRDLHELPMAIRSLQRWDELSTEIGMDLGFRRSGILYGTLNDADLARWEKWGQQAK 122 Query: 143 EIGFVSHILSASEVKARTPSGGPGYKGGVWSPTDGRAEPSRAAPALAEGAKRLGAHLYQQ 202 +IGF S +LSA E + R ++GGVWSPTDGRAEPS+A PA+A+GA+ LGA ++Q+ Sbjct: 123 QIGFTSQLLSAREAQERI-GDKTAWRGGVWSPTDGRAEPSQAVPAIAKGAQNLGASIFQR 181 Query: 203 CAVRGLETSGGRLSGVWTERGLIKASTVVCAGGAWSGRLCRRHGIAFPVVNVVGTTMRTS 262 CAVR L+ S GR+SGVWTERGL+KAS V+C GGAWS R CR++GI P N++GT +T+ Sbjct: 182 CAVRALDISAGRVSGVWTERGLVKASRVICCGGAWSSRFCRQYGIELPAANILGTVFKTT 241 Query: 263 VAPEVVSGCFSGPGFALRRRLDGAYSVAVPGFGRIDLAPVGLKNGLQYYRNYKNDIGKKL 322 APE+V GC S P +RRRLDG+Y+VAVPG G+IDLAP ++ ++Y +++ + KKL Sbjct: 242 AAPEIVKGCLSTPQLCVRRRLDGSYTVAVPGLGQIDLAPQNIRYAAKFYPMFRSKVAKKL 301 Query: 323 TYRLSRAWMEGPEATSTWAFDQVSPFERCRVLDPRPDPDFARRALDNVKRAIPQLSELRV 382 RL+ ++ GPEA+ +W+ D SPFE+ RVLDP PD L + R P L +V Sbjct: 302 KIRLNGSFFSGPEASGSWSHDTPSPFEKIRVLDPTPDNRIVNDGLAELIRLFPALEGTKV 361 Query: 383 AYAWAGAIDTTPDLIPVISDVAALPGLYLATGFSGHGFALGPAAGELVADMVTGASPMID 442 YAWAG IDTTPDL+PVI +V +PG+++A+GFSGHGFA+GP AG L A M+T D Sbjct: 362 DYAWAGWIDTTPDLVPVIDEVNQIPGMFIASGFSGHGFAIGPGAGLLCAQMMTNKPVYTD 421 Query: 443 VSPYRLSRFNDGTSLKVPEMM 463 ++PYRLSRF+ G ++ P+MM Sbjct: 422 LAPYRLSRFDKGNVIRQPQMM 442