BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0996.p         (225 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774684.1| phosphate regulon two-component response reg...   434   e-120
ref|YP_001353976.1| phosphate regulon two-component response reg...   366   1e-99
ref|ZP_08273989.1| Phosphate regulon transcriptional regulatory ...   363   1e-98
ref|YP_001099418.1| response regulator [Herminiimonas arsenicoxy...   360   7e-98
ref|YP_004753158.1| phosphate regulon transcriptional regulatory...   344   6e-93

>ref|YP_003774684.1| phosphate regulon two-component response regulator transcription
           regulator protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ62776.1| phosphate regulon two-component response regulator transcription
           regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 245

 Score =  434 bits (1115), Expect = e-120,   Method: Composition-based stats.
 Identities = 224/225 (99%), Positives = 225/225 (100%)

Query: 1   MTTILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSG 60
           MTTILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSG
Sbjct: 21  MTTILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSG 80

Query: 61  LHLLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLR 120
           LHLLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLR
Sbjct: 81  LHLLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLR 140

Query: 121 RKSPEHAQEVMSAGPVTLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLD 180
           RKSPEHAQEVMSAGP+TLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLD
Sbjct: 141 RKSPEHAQEVMSAGPITLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLD 200

Query: 181 RVWGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 225
           RVWGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK
Sbjct: 201 RVWGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 245


>ref|YP_001353976.1| phosphate regulon two-component response regulator
           [Janthinobacterium sp. Marseille]
 gb|ABR88647.1| phosphate regulon two-component response regulator
           [Janthinobacterium sp. Marseille]
          Length = 229

 Score =  366 bits (940), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 180/223 (80%), Positives = 201/223 (90%)

Query: 3   TILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSGLH 62
           TILIVEDEP I EL+ FTLK AGW+   V NA  AWDF+Q R PQL+LLDWMLPD+SGL 
Sbjct: 7   TILIVEDEPPIIELVTFTLKGAGWNVAAVQNAGDAWDFIQQRLPQLILLDWMLPDQSGLR 66

Query: 63  LLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRK 122
           LLSRIRADRQ  +L +IMLTAKSMEEDKIAGLDNGADDY+TKPFSPRELTARI ALLRRK
Sbjct: 67  LLSRIRADRQFNELPIIMLTAKSMEEDKIAGLDNGADDYVTKPFSPRELTARINALLRRK 126

Query: 123 SPEHAQEVMSAGPVTLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLDRV 182
           +PEH+Q +M+AG ++LDP SCSVS++  +IDIGHAE+KLLKFFLAHPDRVFSRSQLLD+V
Sbjct: 127 TPEHSQTLMTAGNISLDPVSCSVSMNDEKIDIGHAEFKLLKFFLAHPDRVFSRSQLLDKV 186

Query: 183 WGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 225
           WGDHVVIEERTVDVHVLRLRKAL+DAE+LIKTVRSVGYMLSTK
Sbjct: 187 WGDHVVIEERTVDVHVLRLRKALKDAEHLIKTVRSVGYMLSTK 229


>ref|ZP_08273989.1| Phosphate regulon transcriptional regulatory protein PhoB
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32543.1| Phosphate regulon transcriptional regulatory protein PhoB
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 229

 Score =  363 bits (932), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 181/224 (80%), Positives = 205/224 (91%)

Query: 2   TTILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSGL 61
           TTILIVEDEPSI EL+++TL+EAGW++  V+  A AW+F+Q R P L+LLDWMLPD+SGL
Sbjct: 6   TTILIVEDEPSIVELVSYTLREAGWNTMAVNTTAEAWEFIQRRTPHLILLDWMLPDQSGL 65

Query: 62  HLLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRR 121
            LLSRIRADRQLQ + VIMLTAK+MEEDKIAGLDNGADDY+TKPFSPRELTARIKALLRR
Sbjct: 66  RLLSRIRADRQLQAIPVIMLTAKTMEEDKIAGLDNGADDYVTKPFSPRELTARIKALLRR 125

Query: 122 KSPEHAQEVMSAGPVTLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLDR 181
           KSPEHAQ +M AGPVTLDP SCSVSLS  +I+IGHAE+KLLKFFLAHPDRVFSR+QLLD+
Sbjct: 126 KSPEHAQSMMRAGPVTLDPISCSVSLSDQKIEIGHAEFKLLKFFLAHPDRVFSRTQLLDK 185

Query: 182 VWGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 225
           VWGDH VIEERTVDVHVLRLRKAL++AE+LI+TVRSVGYMLS K
Sbjct: 186 VWGDHAVIEERTVDVHVLRLRKALKEAEHLIRTVRSVGYMLSEK 229


>ref|YP_001099418.1| response regulator [Herminiimonas arsenicoxydans]
 emb|CAL61291.1| Phosphate regulon transcriptional regulatory protein PhoB
           [Herminiimonas arsenicoxydans]
          Length = 229

 Score =  360 bits (925), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 178/223 (79%), Positives = 199/223 (89%)

Query: 3   TILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSGLH 62
           TILIVEDEP I EL+ FTLK AGW+   V  A  AWDF+Q R PQL+LLDWMLPD+SGL 
Sbjct: 7   TILIVEDEPPIIELVTFTLKGAGWNVTAVQTAGEAWDFIQQRLPQLILLDWMLPDQSGLR 66

Query: 63  LLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRK 122
           LLSRIRADRQ  +L +IMLTAKSMEEDKIAGLDNGADDY+TKPFSPRELTARI ALLRRK
Sbjct: 67  LLSRIRADRQFNELPIIMLTAKSMEEDKIAGLDNGADDYVTKPFSPRELTARINALLRRK 126

Query: 123 SPEHAQEVMSAGPVTLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLDRV 182
           +PEHAQ +M+AG ++LDP SCSVS++  +IDIGHAE+KLLKFFLAHPDRVFSRSQLLD+V
Sbjct: 127 TPEHAQTLMTAGSISLDPISCSVSMNDEKIDIGHAEFKLLKFFLAHPDRVFSRSQLLDKV 186

Query: 183 WGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 225
           WGDHVVIEERTVDVHVLRLRKAL++AE+LIKTVRSVGYMLS K
Sbjct: 187 WGDHVVIEERTVDVHVLRLRKALKEAEHLIKTVRSVGYMLSEK 229


>ref|YP_004753158.1| phosphate regulon transcriptional regulatory protein [Collimonas
           fungivorans Ter331]
 gb|AEK62335.1| Phosphate regulon transcriptional regulatory protein [Collimonas
           fungivorans Ter331]
          Length = 229

 Score =  344 bits (882), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 170/224 (75%), Positives = 199/224 (88%)

Query: 2   TTILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQLVLLDWMLPDRSGL 61
           T+ILI+EDEP+IAELI FT+KEAGW+  +V  AA  W+FVQ R P LVLLDWMLPD+SGL
Sbjct: 6   TSILIIEDEPAIAELIGFTIKEAGWTPSIVHTAADGWEFVQRRTPHLVLLDWMLPDQSGL 65

Query: 62  HLLSRIRADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRR 121
            LLS++RADRQLQ + ++MLTAKSMEEDKI+GLDNGADDY+TKPFSPRELT+R+KALLRR
Sbjct: 66  RLLSQMRADRQLQSMLIMMLTAKSMEEDKISGLDNGADDYMTKPFSPRELTSRVKALLRR 125

Query: 122 KSPEHAQEVMSAGPVTLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLDR 181
           K  +    +MSAG V+LDPASCSV L   +IDIGHAEY+LLKFF+A+PDRVFSRSQLLD+
Sbjct: 126 KGADEVPGMMSAGAVSLDPASCSVCLENQKIDIGHAEYRLLKFFMANPDRVFSRSQLLDK 185

Query: 182 VWGDHVVIEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 225
           VWGDHVVIEERTVDVHVLRLRKALR++E+LI+TVRSVGYMLS K
Sbjct: 186 VWGDHVVIEERTVDVHVLRLRKALRESEHLIRTVRSVGYMLSAK 229