BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0978.p (205 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774665.1| hypothetical protein Hsero_1241 [Herbaspiril... 269 2e-70 ref|YP_001202605.1| hypothetical protein BRADO0411 [Bradyrhizobi... 133 2e-29 ref|YP_530075.1| hypothetical protein RPC_0181 [Rhodopseudomonas... 130 1e-28 ref|ZP_08627744.1| hypothetical protein CSIRO_0809 [Bradyrhizobi... 129 2e-28 ref|NP_945536.1| hypothetical protein RPA0183 [Rhodopseudomonas ... 128 4e-28 >ref|YP_003774665.1| hypothetical protein Hsero_1241 [Herbaspirillum seropedicae SmR1] gb|ADJ62757.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 186 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 175/185 (94%), Positives = 182/185 (98%) Query: 20 MTEATENLEHAEHAHASGNKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSF 79 MTE TENLEHAEHAHASGNKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSF Sbjct: 1 MTETTENLEHAEHAHASGNKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSF 60 Query: 80 FQAKSVRGNAAQLAKQQLSLLGNPKDERISAAVAKLDDAIAHYDSDEKSGEGKKELSHKA 139 FQAKSVRGNAAQLAK QL+LLGNPKDER++AA+AKLDDAIAHYDSDEKSGEGKKEL+HKA Sbjct: 61 FQAKSVRGNAAQLAKTQLTLLGNPKDERVNAAIAKLDDAIAHYDSDEKSGEGKKELAHKA 120 Query: 140 REAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAFVGAG 199 REAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAF+GAG Sbjct: 121 REAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAFIGAG 180 Query: 200 LLGSV 204 L G+V Sbjct: 181 LFGTV 185 >ref|YP_001202605.1| hypothetical protein BRADO0411 [Bradyrhizobium sp. ORS 278] emb|CAL74359.1| conserved hypothetical protein, putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 196 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 7/186 (3%) Query: 23 ATENLEHAEHA-HASG-NKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSFF 80 A E++EHAEHA HASG NKK+ALLIA++AL LA++ETL K QTE I K+ EA+NLW+FF Sbjct: 3 AHESMEHAEHAEHASGENKKIALLIAVIALFLALSETLGKGAQTESISKNVEASNLWAFF 62 Query: 81 QAKSVRGNAAQLAKQQ--LSLLGNPKDERISAAVAKLDD---AIAHYDSDEKSGEGKKEL 135 QAK+VR Q A +Q L+L P D +A ++DD A Y S+ ++GEG ++L Sbjct: 63 QAKTVRRTVVQTAAEQGKLNLPALPDDASKAALQKQIDDWQKNAARYRSEPETGEGSEQL 122 Query: 136 SHKAREAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAF 195 + +A+ AEHE KY E+A+ Q+ IVLASATIITG+ VLA++S G+ +V +A Sbjct: 123 AERAKHAEHERDEATAKYHHYELASAAFQIGIVLASATIITGMIVLAWVSGGLALVGIAM 182 Query: 196 VGAGLL 201 GL Sbjct: 183 TLLGLF 188 >ref|YP_530075.1| hypothetical protein RPC_0181 [Rhodopseudomonas palustris BisB18] gb|ABD85756.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 196 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 91/187 (48%), Positives = 121/187 (64%), Gaps = 7/187 (3%) Query: 23 ATENLEHAEHA-HASG-NKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSFF 80 A E++EHAEHA HASG NKK+ALLI+++AL LA++ETL K QTE I K+ EA+NLW+FF Sbjct: 3 AHESMEHAEHAEHASGSNKKIALLISVIALFLALSETLGKGAQTESISKNVEASNLWAFF 62 Query: 81 QAKSVRGNAAQLAKQQLSL-LGNPKDERISAAVAKLDD----AIAHYDSDEKSGEGKKEL 135 QAKS+R Q + L LG DE AA+ K D Y S+ ++GEG ++L Sbjct: 63 QAKSIRRTVVQAVSENAKLGLGPIADETAKAALQKQIDEWQKTAQRYRSEPETGEGSEQL 122 Query: 136 SHKAREAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAF 195 + +A+ AEH+ M +Y E+A+ Q+ IVLASATIITG+ VLA+LS + V LAF Sbjct: 123 AERAKHAEHDRDLAMARYHHYEVASAAFQIGIVLASATIITGMIVLAWLSGALAVTGLAF 182 Query: 196 VGAGLLG 202 GL Sbjct: 183 TAIGLFA 189 >ref|ZP_08627744.1| hypothetical protein CSIRO_0809 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09648.1| hypothetical protein CSIRO_0809 [Bradyrhizobiaceae bacterium SG-6C] Length = 223 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 89/186 (47%), Positives = 120/186 (64%), Gaps = 6/186 (3%) Query: 22 EATENLEHAEHAHASGNKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSFFQ 81 E+ E+ EHAEHA +S NK +ALLIA++AL LA +ETL K QTE I K+ EA+NLW+FFQ Sbjct: 32 ESMEHAEHAEHA-SSSNKSIALLIAVIALFLAFSETLGKGAQTESISKNVEASNLWAFFQ 90 Query: 82 AKSVRGNAAQLAKQQLSL-LGNPKDERISAAVAK-LDD---AIAHYDSDEKSGEGKKELS 136 AKS+R Q + L LG DE AA+AK +DD A Y S+ ++GEG ++L+ Sbjct: 91 AKSIRRTTVQAVAEHAKLSLGAATDEAQKAALAKQIDDWTKTAARYRSEPETGEGSEQLA 150 Query: 137 HKAREAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAFV 196 +A+EAEH M +Y E+A+ Q+ IVLASATIITG+ LA++S + + LAF Sbjct: 151 ARAKEAEHARDLAMARYHHYEVASAAFQIGIVLASATIITGMVALAWISGALALAGLAFT 210 Query: 197 GAGLLG 202 GL Sbjct: 211 AIGLFA 216 >ref|NP_945536.1| hypothetical protein RPA0183 [Rhodopseudomonas palustris CGA009] ref|YP_001989216.1| hypothetical protein Rpal_0178 [Rhodopseudomonas palustris TIE-1] emb|CAE25627.1| unknown protein [Rhodopseudomonas palustris CGA009] gb|ACE98740.1| putative membrane protein of unknown function [Rhodopseudomonas palustris TIE-1] Length = 196 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 91/187 (48%), Positives = 122/187 (65%), Gaps = 7/187 (3%) Query: 23 ATENLEHAEHA-HASG-NKKLALLIAILALVLAITETLSKSYQTEVILKHQEAANLWSFF 80 A E++EHAEHA HASG NK +ALLI+++AL LA +ETL K QTE + K+ EA+NLW+FF Sbjct: 3 AHESMEHAEHAEHASGSNKGIALLISVIALFLAFSETLGKGAQTEALAKNVEASNLWAFF 62 Query: 81 QAKSVRGNAAQLAKQQLSL-LGNPKDERISAAVAK-LDD---AIAHYDSDEKSGEGKKEL 135 QAKS+R Q + L LG DE AA+ K +DD A Y S+ ++GEG ++L Sbjct: 63 QAKSIRRTTVQAVSEHARLSLGTVPDEATKAALQKQIDDWQKTAARYRSEPETGEGSEQL 122 Query: 136 SHKAREAEHEAHAYMEKYEKMEMAAGMLQVAIVLASATIITGVAVLAYLSMGIGVVALAF 195 + +A+ AEHE M +Y E+A+ Q+ IVLASATIITG+ VLA+LS + V L F Sbjct: 123 AERAKHAEHERDLAMARYHHYEVASAAFQIGIVLASATIITGMMVLAWLSGLLAVGGLGF 182 Query: 196 VGAGLLG 202 + GL Sbjct: 183 MAIGLFA 189