BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0960.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774650.1| hypothetical protein Hsero_1226 [Herbaspiril... 371 e-101 ref|YP_981183.1| DTW domain-containing protein [Polaromonas naph... 196 2e-48 ref|YP_004750778.1| DTW domain containing protein [Collimonas fu... 192 4e-47 ref|YP_001353552.1| hypothetical protein mma_1862 [Janthinobacte... 189 4e-46 ref|YP_001099777.1| hypothetical protein HEAR1479 [Herminiimonas... 179 2e-43 >ref|YP_003774650.1| hypothetical protein Hsero_1226 [Herbaspirillum seropedicae SmR1] gb|ADJ62742.1| hypothetical protein Hsero_1226 [Herbaspirillum seropedicae SmR1] Length = 231 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 185/227 (81%), Positives = 199/227 (87%) Query: 13 VSNHDQQLARRLLCPICQRALTACICHWTSPIDHAVDVLILQHPLEVSNAKNSVRLLHLS 72 + H Q +RRLLCPICQRA+TACICHWTSPIDHA DVLILQHPLEV NAKNSVRLLHLS Sbjct: 5 LDQHAQPASRRLLCPICQRAMTACICHWTSPIDHAFDVLILQHPLEVGNAKNSVRLLHLS 64 Query: 73 LPYSKLVVGSVFDAEELHAMMHAPSRLRGVSSTEPVHPVLLYTDDVCTPETRYFDARTMM 132 LP SKLVVGSVFD +EL A++H PSRLR VS +E VHPVLLYTDD T T YFDARTM Sbjct: 65 LPASKLVVGSVFDTDELEALLHGPSRLRNVSPSEKVHPVLLYTDDASTSATTYFDARTMR 124 Query: 133 VDKQETLKRVRLVIIDGTWRKSRKMLFENPILQTLPRMMLIDTPTSRYTIRKSHKPEQLA 192 V+ QE +RVRLVI+DGTWRKSRKMLFENPILQTLPR++L DTP SRYTIRKSHKPEQL+ Sbjct: 125 VEGQEQFQRVRLVILDGTWRKSRKMLFENPILQTLPRLVLSDTPASRYTIRKSHKPEQLS 184 Query: 193 TLEATGYALMQLERNSEKYHPLLTAFDNFVLQQGYMRMHGQATRRSE 239 TLEA GYALMQLERNSEKYHPLLTAFDNFVLQQGYMR+HGQA RR E Sbjct: 185 TLEAVGYALMQLERNSEKYHPLLTAFDNFVLQQGYMRLHGQAVRRGE 231 >ref|YP_981183.1| DTW domain-containing protein [Polaromonas naphthalenivorans CJ2] gb|ABM36262.1| DTW domain containing protein [Polaromonas naphthalenivorans CJ2] Length = 215 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 113/218 (51%), Positives = 139/218 (63%), Gaps = 16/218 (7%) Query: 22 RRLLCPICQRALTACICHWTSPIDHAVDVLILQHPLEVSNAKNSVRLLHLSLPYSKLVVG 81 +RL C C R +ACIC W +P+ H V+VLILQHPLEV NAK S RLLHLSLP S+LV G Sbjct: 8 KRLACATCLRPQSACICQWITPVAHEVEVLILQHPLEVDNAKGSARLLHLSLPRSRLVTG 67 Query: 82 SVFDAEELHAMMHAPSRLRGVSSTEPV-HPVLLYTDDVCTPETRYFDARTMMVDKQETLK 140 VFD P+ L G + P VLLY D TP+ + + E L+ Sbjct: 68 EVFDL---------PALLAGPPESGPTRQSVLLYPD---TPQDQAPSLSPPPMLAPELLR 115 Query: 141 ---RVRLVIIDGTWRKSRKMLFENPILQTLPRMMLIDTPTSRYTIRKSHKPEQLATLEAT 197 R+RL+++DGTWRKSRKML+ NP+LQ LPR+ L D P S Y IRK+H+P+QL+TLEAT Sbjct: 116 DPSRLRLIVLDGTWRKSRKMLYRNPLLQQLPRLSLQDMPASHYLIRKAHRPDQLSTLEAT 175 Query: 198 GYALMQLERNSEKYHPLLTAFDNFVLQQGYMRMHGQAT 235 ALMQLE + EK+ PL+ AFD FV QQ R G T Sbjct: 176 CAALMQLEGSVEKFQPLMAAFDGFVAQQLGYRAAGGTT 213 >ref|YP_004750778.1| DTW domain containing protein [Collimonas fungivorans Ter331] gb|AEK59955.1| DTW domain containing protein [Collimonas fungivorans Ter331] Length = 213 Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 110/216 (50%), Positives = 141/216 (65%), Gaps = 20/216 (9%) Query: 22 RRLLCPICQRALTACICHWTSPIDHAVDVLILQHPLEVSNAKNSVRLLHLSLPYSKLVVG 81 +RL CP C R +ACIC W +P + A+DVLILQHPLEV AK S RLL LSL S+L+VG Sbjct: 8 QRLACPRCLRPQSACICSWITPTEPAIDVLILQHPLEVRQAKGSARLLQLSLARSELIVG 67 Query: 82 SVFDAEELHAMMHAPSRLRGVSSTEPVHPVLLYTDDVCTPETRYFDARTMMVDKQETLK- 140 FD + L A++H P+R H +LLY D +P + + Q L+ Sbjct: 68 ETFDEQGLKALLHTPAR----------HAILLYPD---SPADKSLELAAAPPLDQAWLRE 114 Query: 141 --RVRLVIIDGTWRKSRKMLFENPILQTLPRM----MLIDTPTSRYTIRKSHKPEQLATL 194 ++RLV++DGTWRKSRKML+ NP+LQ LPR+ +L TP SRY IRK+ +P QL+TL Sbjct: 115 PAQLRLVVLDGTWRKSRKMLYLNPLLQELPRLSLQNLLTSTPASRYLIRKAQRPGQLSTL 174 Query: 195 EATGYALMQLERNSEKYHPLLTAFDNFVLQQGYMRM 230 EAT +ALMQLE++ EKY LLTAFD FV QQ R+ Sbjct: 175 EATCHALMQLEQDEEKYQSLLTAFDGFVAQQVACRI 210 >ref|YP_001353552.1| hypothetical protein mma_1862 [Janthinobacterium sp. Marseille] gb|ABR90227.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 210 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 110/209 (52%), Positives = 139/209 (66%), Gaps = 8/209 (3%) Query: 21 ARRLLCPICQRALTACICHWTSPIDHAVDVLILQHPLEVSNAKNSVRLLHLSLPYSKLVV 80 A+R C C RA +ACICHW +P++H V+VL LQHPLEV+N KNS RLLHLSLP+S+L V Sbjct: 5 AKRPSCSRCLRAQSACICHWITPVEHQVEVLFLQHPLEVANVKNSARLLHLSLPHSRLAV 64 Query: 81 GSVFDAEELHAMMHAPSRLRGVSSTEPVHPVLLYTDDVCTPETRYFDARTMMVDKQETLK 140 G F +EL +++A G + V P+LLY D T A + + Sbjct: 65 GEAFGEDELRRLLYAGFDGAGTA----VQPILLYPDT----STDSLLALPPPWPETTDVG 116 Query: 141 RVRLVIIDGTWRKSRKMLFENPILQTLPRMMLIDTPTSRYTIRKSHKPEQLATLEATGYA 200 RLV++DGTWRKSRKML+ NP+LQ LPR+ L D P S Y IRK+HKP+QL++ EAT +A Sbjct: 117 AYRLVVLDGTWRKSRKMLYLNPLLQQLPRLPLADPPASVYAIRKAHKPDQLSSFEATCHA 176 Query: 201 LMQLERNSEKYHPLLTAFDNFVLQQGYMR 229 LMQLE +S+KY PLL AFD FV QQ R Sbjct: 177 LMQLENDSDKYVPLLDAFDGFVAQQQAYR 205 >ref|YP_001099777.1| hypothetical protein HEAR1479 [Herminiimonas arsenicoxydans] emb|CAL61650.1| conserved hypothetical protein; putative DTW domain [Herminiimonas arsenicoxydans] Length = 223 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 111/212 (52%), Positives = 139/212 (65%), Gaps = 16/212 (7%) Query: 21 ARRLLCPICQRALTACICHWTSPIDHAVDVLILQHPLEVSNAKNSVRLLHLSLPYSKLVV 80 ++RL C C R CIC W +P++H V+VL LQHPLEV NAKN+ RLLH+SLP+S+LVV Sbjct: 7 SKRLYCARCLRPQRTCICQWVTPLEHDVEVLFLQHPLEVGNAKNTARLLHMSLPHSRLVV 66 Query: 81 GSVFDAEELHAMMHAPSRLRGVSSTEPVH-------PVLLYTDDVCTPETRYFDARTMMV 133 G F +EL A++ AP S + VH P+LLY ++ E T+ Sbjct: 67 GETFSEQELQALLRAP-----FDSADEVHAQGKTVCPLLLYPEN--AEEQALISPLTVAQ 119 Query: 134 DKQETLKRVRLVIIDGTWRKSRKMLFENPILQTLPRMMLIDTPTSRYTIRKSHKPEQLAT 193 ET R+RL++IDGTWRKSRKML NP+LQ LPR+ L D P S Y IRK+HK +QL++ Sbjct: 120 ITAET--RIRLIVIDGTWRKSRKMLHLNPLLQQLPRLPLRDPPPSHYRIRKAHKADQLSS 177 Query: 194 LEATGYALMQLERNSEKYHPLLTAFDNFVLQQ 225 EAT YALM LE N+EKY PLL AFD FV QQ Sbjct: 178 FEATCYALMHLEENTEKYKPLLAAFDGFVTQQ 209