BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0956.p (160 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774648.1| transcription regulator protein [Herbaspiril... 269 1e-70 ref|YP_001354132.1| transcriptional regulator NrdR [Janthinobact... 244 4e-63 ref|YP_001100631.1| transcriptional regulator NrdR [Herminiimona... 241 2e-62 ref|YP_004754046.1| ribonucleotide reductase transcriptional reg... 224 5e-57 ref|ZP_08274701.1| Ribonucleotide reductase transcriptional regu... 204 4e-51 >ref|YP_003774648.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62740.1| transcription regulator, consists of a Zn-ribbon and ATP-cone domains protein [Herbaspirillum seropedicae SmR1] Length = 159 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 146/160 (91%), Positives = 156/160 (97%), Gaps = 1/160 (0%) Query: 1 MKCPFCNHDDTPVLDTRISEEGDAIRRRRRCGNCDKRFTTYERIELTMPVIVKKNGSRTD 60 MKCPFCNH+DTPVLDTR+SE+G +IRRRRRCGNCDKRFTTYERIELT+PVIVKKNGSRT+ Sbjct: 1 MKCPFCNHEDTPVLDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTE 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVVSGQVGELVMRELKRLD 120 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREV+SGQ+GELVMRELKRLD Sbjct: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLD 120 Query: 121 KIAYIRFASVYKSFEDVTEFQDAIAEVGQERKAAAKKRND 160 KIAYIRFASVYKSFEDV EFQDAIAEVGQERK AK+R+D Sbjct: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGQERK-GAKRRDD 159 >ref|YP_001354132.1| transcriptional regulator NrdR [Janthinobacterium sp. Marseille] sp|A6T0T5|NRDR_JANMA RecName: Full=Transcriptional repressor NrdR gb|ABR89909.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 155 Score = 244 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 132/154 (85%), Positives = 142/154 (92%) Query: 1 MKCPFCNHDDTPVLDTRISEEGDAIRRRRRCGNCDKRFTTYERIELTMPVIVKKNGSRTD 60 MKCPFC HDDT VLDTR+SEEGD+IRRRRRC +CDKRFTTYERIELTMPV+VKKNGSRTD Sbjct: 1 MKCPFCQHDDTQVLDTRVSEEGDSIRRRRRCTSCDKRFTTYERIELTMPVVVKKNGSRTD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVVSGQVGELVMRELKRLD 120 FDP KL+GSL LALRKRPVSAEAVD AI I+ KLL SGEREV+SGQ+GELVMREL+RLD Sbjct: 61 FDPKKLQGSLQLALRKRPVSAEAVDAAIHRIEQKLLSSGEREVISGQIGELVMRELQRLD 120 Query: 121 KIAYIRFASVYKSFEDVTEFQDAIAEVGQERKAA 154 KIAYIRFASVYKSFEDV EFQDAIAEVG+ERK A Sbjct: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGRERKPA 154 >ref|YP_001100631.1| transcriptional regulator NrdR [Herminiimonas arsenicoxydans] sp|A4G7M3|NRDR_HERAR RecName: Full=Transcriptional repressor NrdR emb|CAL62510.1| Transcriptional repressor NrdR [Herminiimonas arsenicoxydans] Length = 156 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 133/156 (85%), Positives = 141/156 (90%) Query: 1 MKCPFCNHDDTPVLDTRISEEGDAIRRRRRCGNCDKRFTTYERIELTMPVIVKKNGSRTD 60 MKCPFC HDDT VLDTRISEEGD+IRRRRRC +CDKRFTTYERIEL MPVIVKKNGSRTD Sbjct: 1 MKCPFCQHDDTQVLDTRISEEGDSIRRRRRCVSCDKRFTTYERIELAMPVIVKKNGSRTD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVVSGQVGELVMRELKRLD 120 FDP KL+ SL LALRKRPVSAEAVD AI I+ KLL SGEREVVSGQ+GELVMREL+RLD Sbjct: 61 FDPKKLQASLQLALRKRPVSAEAVDAAIHRIEQKLLSSGEREVVSGQIGELVMRELQRLD 120 Query: 121 KIAYIRFASVYKSFEDVTEFQDAIAEVGQERKAAAK 156 KIAYIRFASVYKSFEDV EFQDAIAEVG+ERK +K Sbjct: 121 KIAYIRFASVYKSFEDVAEFQDAIAEVGRERKPPSK 156 >ref|YP_004754046.1| ribonucleotide reductase transcriptional regulator NrdR [Collimonas fungivorans Ter331] gb|AEK63223.1| Ribonucleotide reductase transcriptional regulator NrdR [Collimonas fungivorans Ter331] Length = 155 Score = 224 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 120/146 (82%), Positives = 131/146 (89%) Query: 1 MKCPFCNHDDTPVLDTRISEEGDAIRRRRRCGNCDKRFTTYERIELTMPVIVKKNGSRTD 60 MKCPFC H++T VLDTR+SEEGD+IRRRRRC CDKRFTT+ERIEL MPVIVKKNGSRTD Sbjct: 1 MKCPFCQHEETQVLDTRVSEEGDSIRRRRRCMQCDKRFTTFERIELAMPVIVKKNGSRTD 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVVSGQVGELVMRELKRLD 120 FDP KLR SLMLALRKRPVS EA+D A+Q I++KLL SGEREV+SG VGELVMRELKRLD Sbjct: 61 FDPLKLRASLMLALRKRPVSVEALDEALQRIKEKLLSSGEREVLSGHVGELVMRELKRLD 120 Query: 121 KIAYIRFASVYKSFEDVTEFQDAIAE 146 KIAYIRFASVYKSFEDV EFQ+ I E Sbjct: 121 KIAYIRFASVYKSFEDVAEFQNMIEE 146 >ref|ZP_08274701.1| Ribonucleotide reductase transcriptional regulator NrdR [Oxalobacteraceae bacterium IMCC9480] gb|EGF31831.1| Ribonucleotide reductase transcriptional regulator NrdR [Oxalobacteraceae bacterium IMCC9480] Length = 157 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 117/156 (75%), Positives = 128/156 (82%) Query: 1 MKCPFCNHDDTPVLDTRISEEGDAIRRRRRCGNCDKRFTTYERIELTMPVIVKKNGSRTD 60 MKCPFC HDDT VLDTR+SE GDAIRRRRRC C+KRF T+ERIEL MP IVKK+GSRT+ Sbjct: 1 MKCPFCQHDDTQVLDTRVSELGDAIRRRRRCVKCEKRFITFERIELVMPAIVKKSGSRTE 60 Query: 61 FDPAKLRGSLMLALRKRPVSAEAVDMAIQSIQDKLLQSGEREVVSGQVGELVMRELKRLD 120 FD KLR SLMLALRKRPVSA AVD A+ I++K+ SGERE+ SG +GELVM ELK LD Sbjct: 61 FDSTKLRSSLMLALRKRPVSAVAVDAAVHCIEEKIRTSGEREIASGHIGELVMHELKSLD 120 Query: 121 KIAYIRFASVYKSFEDVTEFQDAIAEVGQERKAAAK 156 KIAYIRFASVYKSFEDV EFQ AIAEV ERK K Sbjct: 121 KIAYIRFASVYKSFEDVAEFQAAIAEVAHERKVDPK 156