BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0955.p (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774647.1| serine hydroxymethyltransferase [Herbaspiril... 809 0.0 emb|CAP19676.1| serine hydroxymethyltransferase protein [Herbasp... 808 0.0 ref|YP_004754047.1| serine hydroxymethyltransferase [Collimonas ... 749 0.0 ref|YP_001354133.1| serine hydroxymethyltransferase [Janthinobac... 747 0.0 ref|YP_001100632.1| serine hydroxymethyltransferase [Herminiimon... 744 0.0 >ref|YP_003774647.1| serine hydroxymethyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ62739.1| serine hydroxymethyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 414 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 408/414 (98%), Positives = 410/414 (99%) Query: 97 MFDKNQTLAKVDPDLWSAIQKENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 156 MFDKNQTLAKVDPDLWSAIQKEN RQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP Sbjct: 1 MFDKNQTLAKVDPDLWSAIQKENARQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 60 Query: 157 GKRYYGGCEFVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 216 GKRYYGGCE+VDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS Sbjct: 61 GKRYYGGCEYVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 120 Query: 217 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLAREKKPKLIIAGASAYSLR 276 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDY+AMERLAREKKPKLIIAGASAYSLR Sbjct: 121 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYEAMERLAREKKPKLIIAGASAYSLR 180 Query: 277 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 336 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL Sbjct: 181 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 240 Query: 337 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 396 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI Sbjct: 241 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 300 Query: 397 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 456 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR Sbjct: 301 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 360 Query: 457 LGSPAMTTRGFKEAEAEKVGNLIADVLDNPHDAATIERVKVEVKKLTDAFPVYA 510 LGSPAMTTRGFKEAEAEKVGN IADVLDNPHDAATIERVK EVKKLTDAFPVY Sbjct: 361 LGSPAMTTRGFKEAEAEKVGNFIADVLDNPHDAATIERVKAEVKKLTDAFPVYG 414 >emb|CAP19676.1| serine hydroxymethyltransferase protein [Herbaspirillum seropedicae] Length = 414 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 407/414 (98%), Positives = 409/414 (98%) Query: 97 MFDKNQTLAKVDPDLWSAIQKENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 156 MFDKNQTLAKVDPDLWSAIQKEN RQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP Sbjct: 1 MFDKNQTLAKVDPDLWSAIQKENARQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 60 Query: 157 GKRYYGGCEFVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 216 GKRYYGGCE+VDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS Sbjct: 61 GKRYYGGCEYVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 120 Query: 217 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLAREKKPKLIIAGASAYSLR 276 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDY+AMERLAREKKPKLIIAGASAYSLR Sbjct: 121 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYEAMERLAREKKPKLIIAGASAYSLR 180 Query: 277 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 336 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL Sbjct: 181 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 240 Query: 337 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 396 MKAEHEKAINSAIFPGIQ GPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI Sbjct: 241 MKAEHEKAINSAIFPGIQCGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 300 Query: 397 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 456 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR Sbjct: 301 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 360 Query: 457 LGSPAMTTRGFKEAEAEKVGNLIADVLDNPHDAATIERVKVEVKKLTDAFPVYA 510 LGSPAMTTRGFKEAEAEKVGN IADVLDNPHDAATIERVK EVKKLTDAFPVY Sbjct: 361 LGSPAMTTRGFKEAEAEKVGNFIADVLDNPHDAATIERVKAEVKKLTDAFPVYG 414 >ref|YP_004754047.1| serine hydroxymethyltransferase [Collimonas fungivorans Ter331] gb|AEK63224.1| Serine hydroxymethyltransferase [Collimonas fungivorans Ter331] Length = 419 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 377/415 (90%), Positives = 392/415 (94%) Query: 97 MFDKNQTLAKVDPDLWSAIQKENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 156 MF+KN TLA VDP+LWSAIQKEN RQQ+HIELIASENYTSPAVMEAQG+QLTNKYAEGYP Sbjct: 5 MFEKNHTLANVDPELWSAIQKENHRQQEHIELIASENYTSPAVMEAQGTQLTNKYAEGYP 64 Query: 157 GKRYYGGCEFVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 216 GKRYYGGCEFVD+AEQLAIDR+K LFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS Sbjct: 65 GKRYYGGCEFVDIAEQLAIDRVKELFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 124 Query: 217 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLAREKKPKLIIAGASAYSLR 276 LAEGGHLTHGMALNMSGKWFNVVSYGLN+KEEIDY+A ERLA EKKPKLIIAGASAY+LR Sbjct: 125 LAEGGHLTHGMALNMSGKWFNVVSYGLNEKEEIDYEAFERLAHEKKPKLIIAGASAYALR 184 Query: 277 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 336 IDFER +K+AK VGAYFMVDMAHYAGLIAAG YPNPVP ADFVTSTTHKSLRGPRGG+IL Sbjct: 185 IDFERMSKVAKAVGAYFMVDMAHYAGLIAAGEYPNPVPHADFVTSTTHKSLRGPRGGIIL 244 Query: 337 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 396 MKAE EKAINSAIFPGIQGGPLMHVIA KAVAFKEA +PEFKAYQQQVVKNAD LAK LI Sbjct: 245 MKAEFEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQQQVVKNADALAKALI 304 Query: 397 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 456 RGLRIVSG TESHVMLVDLR K +TGKEAEAILGSAHMTCNKN IPNDPEKPFVTSGIR Sbjct: 305 ARGLRIVSGRTESHVMLVDLRAKKITGKEAEAILGSAHMTCNKNAIPNDPEKPFVTSGIR 364 Query: 457 LGSPAMTTRGFKEAEAEKVGNLIADVLDNPHDAATIERVKVEVKKLTDAFPVYAA 511 +GSPA TTRGFKEAEA KVGNLIADVLDNPHDAATIERVK EVKKLTDAFPVYAA Sbjct: 365 VGSPAFTTRGFKEAEATKVGNLIADVLDNPHDAATIERVKAEVKKLTDAFPVYAA 419 >ref|YP_001354133.1| serine hydroxymethyltransferase [Janthinobacterium sp. Marseille] sp|A6T0T6|GLYA_JANMA RecName: Full=Serine hydroxymethyltransferase; Short=SHMT; Short=Serine methylase gb|ABR88534.1| glycine hydroxymethyltransferase [Janthinobacterium sp. Marseille] Length = 414 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 370/414 (89%), Positives = 389/414 (93%) Query: 97 MFDKNQTLAKVDPDLWSAIQKENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 156 MF K+QTLAK D +LWSAIQKENTRQQ+HIELIASENYTSPAVMEAQG+QLTNKYAEGYP Sbjct: 1 MFSKDQTLAKTDAELWSAIQKENTRQQEHIELIASENYTSPAVMEAQGTQLTNKYAEGYP 60 Query: 157 GKRYYGGCEFVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 216 GKRYYGGCE+VD+ EQLAIDRLK L+GA+AANVQPNSGSQANQGVF A+LKPGDTIMGMS Sbjct: 61 GKRYYGGCEYVDIVEQLAIDRLKQLYGADAANVQPNSGSQANQGVFLAVLKPGDTIMGMS 120 Query: 217 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLAREKKPKLIIAGASAYSLR 276 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLARE KPKLIIAGASAY+LR Sbjct: 121 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLAREHKPKLIIAGASAYALR 180 Query: 277 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 336 IDFERFAKIAKE+GAYFMVDMAHYAGLIAAG YPNPVPFADFVTSTTHKSLRGPRGG IL Sbjct: 181 IDFERFAKIAKEIGAYFMVDMAHYAGLIAAGEYPNPVPFADFVTSTTHKSLRGPRGGFIL 240 Query: 337 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 396 MKAEHEK INSAIFPG+QGGPLMHVIA KAVAFKEA +PEFK YQQQVVKNAD LAK LI Sbjct: 241 MKAEHEKIINSAIFPGLQGGPLMHVIAGKAVAFKEALAPEFKTYQQQVVKNADALAKALI 300 Query: 397 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 456 RGLRIVS TESHVMLVDLR K +TGK+AE +LGSAH+TCNKN IPNDPEKPFVTSGIR Sbjct: 301 ARGLRIVSNRTESHVMLVDLRAKKITGKDAENLLGSAHITCNKNAIPNDPEKPFVTSGIR 360 Query: 457 LGSPAMTTRGFKEAEAEKVGNLIADVLDNPHDAATIERVKVEVKKLTDAFPVYA 510 LGSPAMTTRGFKEAEA KVGNLIADVL+NP+DAATIERVK EVKKLTDAFPVY Sbjct: 361 LGSPAMTTRGFKEAEATKVGNLIADVLENPNDAATIERVKAEVKKLTDAFPVYG 414 >ref|YP_001100632.1| serine hydroxymethyltransferase [Herminiimonas arsenicoxydans] sp|A4G7M4|GLYA_HERAR RecName: Full=Serine hydroxymethyltransferase; Short=SHMT; Short=Serine methylase emb|CAL62511.1| Serine hydroxymethyltransferase (Serine methylase) (SHMT) [Herminiimonas arsenicoxydans] Length = 414 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 370/414 (89%), Positives = 390/414 (94%) Query: 97 MFDKNQTLAKVDPDLWSAIQKENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 156 MF K+QTLAK D +LWSAIQ+ENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP Sbjct: 1 MFSKDQTLAKTDTELWSAIQQENTRQQDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP 60 Query: 157 GKRYYGGCEFVDVAEQLAIDRLKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGMS 216 GKRYYGGCE+VD+ EQLAIDR+K LFGAEAANVQPNSGSQANQGVFFA+LKPGDTIMGMS Sbjct: 61 GKRYYGGCEYVDIVEQLAIDRVKKLFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGMS 120 Query: 217 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYDAMERLAREKKPKLIIAGASAYSLR 276 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDY+ MERLARE KPK+IIAGASAY+LR Sbjct: 121 LAEGGHLTHGMALNMSGKWFNVVSYGLNDKEEIDYEQMERLAREHKPKMIIAGASAYALR 180 Query: 277 IDFERFAKIAKEVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTSTTHKSLRGPRGGVIL 336 IDFERFAKIAKE+GAYFMVDMAHYAGLIAAG YPNPVP+ADFVTSTTHKSLRGPRGG IL Sbjct: 181 IDFERFAKIAKEIGAYFMVDMAHYAGLIAAGEYPNPVPYADFVTSTTHKSLRGPRGGFIL 240 Query: 337 MKAEHEKAINSAIFPGIQGGPLMHVIAAKAVAFKEAASPEFKAYQQQVVKNADVLAKTLI 396 MKAEHEK INSAIFPGIQGGPLMHVIA KAVAFKEA +PEFK YQQQV+KNAD LAK LI Sbjct: 241 MKAEHEKIINSAIFPGIQGGPLMHVIAGKAVAFKEALAPEFKVYQQQVLKNADALAKALI 300 Query: 397 KRGLRIVSGGTESHVMLVDLRPKGLTGKEAEAILGSAHMTCNKNGIPNDPEKPFVTSGIR 456 RGLRIVS TESHVMLVDLR K +TGK+AEA+LGSAH+T NKNGIPNDPEKPFV+SGIR Sbjct: 301 ARGLRIVSNRTESHVMLVDLRAKKITGKDAEALLGSAHITTNKNGIPNDPEKPFVSSGIR 360 Query: 457 LGSPAMTTRGFKEAEAEKVGNLIADVLDNPHDAATIERVKVEVKKLTDAFPVYA 510 LGSPAMTTRGFKEAEA KVGNLIADVLDNP+DAATIERVK EVKKLTDAFPVY Sbjct: 361 LGSPAMTTRGFKEAEATKVGNLIADVLDNPNDAATIERVKAEVKKLTDAFPVYG 414