BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0951.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774644.1| MotA/TolQ/ExbB proton channel family protein... 375 e-102 ref|YP_004754051.1| MotA/TolQ/ExbB proton channel family protein... 349 2e-94 ref|YP_001100656.1| inner membrane protein [Herminiimonas arseni... 340 7e-92 ref|YP_001354154.1| biopolymer transport protein [Janthinobacter... 336 2e-90 ref|ZP_04577148.1| TolQ protein [Oxalobacter formigenes HOxBLS] ... 320 1e-85 >ref|YP_003774644.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62736.1| MotA/TolQ/ExbB proton channel family protein [Herbaspirillum seropedicae SmR1] Length = 234 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 230/234 (98%), Positives = 233/234 (99%), Gaps = 1/234 (0%) Query: 1 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRSARVQTEEFERVFW 60 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIR+ARVQTEEFERVFW Sbjct: 1 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRAARVQTEEFERVFW 60 Query: 61 SGGNLSALYQDALSNRRKAG-AGGALERIFQAGMGEFTKAKASVAARGGAVEPALLLDGA 119 SGGNLSALYQDALSNRRKAG AGGALERIFQAGMGEFTKAKASVAARGGAV+P+LLLDGA Sbjct: 61 SGGNLSALYQDALSNRRKAGGAGGALERIFQAGMGEFTKAKASVAARGGAVDPSLLLDGA 120 Query: 120 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 179 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA Sbjct: 121 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 180 Query: 180 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR 233 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR Sbjct: 181 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR 234 >ref|YP_004754051.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] gb|AEK63228.1| MotA/TolQ/ExbB proton channel family protein [Collimonas fungivorans Ter331] Length = 233 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 202/234 (86%), Positives = 213/234 (91%), Gaps = 2/234 (0%) Query: 1 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRSARVQTEEFERVFW 60 MNVTQDLSFI+LI NASVLVQLVM LLL+ S++SWTYIFRKMF IRSAR QTEEFER FW Sbjct: 1 MNVTQDLSFITLITNASVLVQLVMALLLAVSVMSWTYIFRKMFAIRSARSQTEEFERAFW 60 Query: 61 SGGNLSALYQDALSNRRK-AGAGGALERIFQAGMGEFTKAKASVAARGGAVEPALLLDGA 119 SGGNL+ LYQDA SNRRK AG GALERIF+AGM EF K KAS+ + A + A LLDGA Sbjct: 61 SGGNLATLYQDATSNRRKGAGQTGALERIFEAGMDEFNKVKASLGHKS-AGDSAALLDGA 119 Query: 120 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 179 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA Sbjct: 120 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 179 Query: 180 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR 233 PGIAEALIATAIGLFAAIPAVVAYNR+SHD+DRLAIRFESFIEEFSNILQRQAR Sbjct: 180 PGIAEALIATAIGLFAAIPAVVAYNRFSHDVDRLAIRFESFIEEFSNILQRQAR 233 >ref|YP_001100656.1| inner membrane protein [Herminiimonas arsenicoxydans] emb|CAL62535.1| Protein TolQ [Herminiimonas arsenicoxydans] Length = 230 Score = 340 bits (873), Expect = 7e-92, Method: Composition-based stats. Identities = 191/234 (81%), Positives = 208/234 (88%), Gaps = 5/234 (2%) Query: 1 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRSARVQTEEFERVFW 60 M VTQDLSF+ LIANASVLVQLVM LL+ S++SWTYIFRKMF I++AR QTEEFER FW Sbjct: 1 MTVTQDLSFVHLIANASVLVQLVMALLVGVSVMSWTYIFRKMFAIKNARTQTEEFERAFW 60 Query: 61 SGGNLSALYQDALSNRRKA-GAGGALERIFQAGMGEFTKAKASVAARGGAVEPALLLDGA 119 SGG+L+ALYQDA SNRRK+ G+ GALERIF+AGM EF K++AS +V LDGA Sbjct: 61 SGGDLNALYQDATSNRRKSSGSTGALERIFEAGMSEFNKSRASHDPSQASVR----LDGA 116 Query: 120 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 179 RRAMRAAYQREMD LESHLAFLASVGSVSPYVGLFGTVWGIMN+FRGLANVQQATLAAVA Sbjct: 117 RRAMRAAYQREMDGLESHLAFLASVGSVSPYVGLFGTVWGIMNSFRGLANVQQATLAAVA 176 Query: 180 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR 233 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLA+RFESF+EEFSNILQRQ R Sbjct: 177 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAMRFESFVEEFSNILQRQTR 230 >ref|YP_001354154.1| biopolymer transport protein [Janthinobacterium sp. Marseille] gb|ABR88733.1| biopolymer transport protein [Janthinobacterium sp. Marseille] Length = 230 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 191/234 (81%), Positives = 204/234 (87%), Gaps = 5/234 (2%) Query: 1 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRSARVQTEEFERVFW 60 M VTQDLSF+ LI NASVLVQLVM LLL S++SWTYIFRKMF I++AR QTEEFER FW Sbjct: 1 MTVTQDLSFVHLITNASVLVQLVMALLLGVSVMSWTYIFRKMFAIKNARAQTEEFERAFW 60 Query: 61 SGGNLSALYQDALSNRRKA-GAGGALERIFQAGMGEFTKAKASVAARGGAVEPALLLDGA 119 SGG+L+ LY +A SNRRK G+ GALERIF+AGM EF KAK S + + LDGA Sbjct: 61 SGGDLNTLYLEASSNRRKNNGSTGALERIFEAGMSEFNKAKGS----NDSFHVSARLDGA 116 Query: 120 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 179 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA Sbjct: 117 RRAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVA 176 Query: 180 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQAR 233 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESF+EEFSNILQRQ R Sbjct: 177 PGIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFVEEFSNILQRQTR 230 >ref|ZP_04577148.1| TolQ protein [Oxalobacter formigenes HOxBLS] gb|EEO28110.1| TolQ protein [Oxalobacter formigenes HOxBLS] Length = 229 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 178/232 (76%), Positives = 199/232 (85%), Gaps = 5/232 (2%) Query: 1 MNVTQDLSFISLIANASVLVQLVMLLLLSASIISWTYIFRKMFTIRSARVQTEEFERVFW 60 M V+QDLSFISLIANAS+LVQL+M LL+ S++SWT+IF+KMF I++ARV+TE FE FW Sbjct: 3 MTVSQDLSFISLIANASLLVQLIMALLVVVSLMSWTFIFQKMFAIKNARVETENFEHAFW 62 Query: 61 SGGNLSALYQDALSNRRKAGAGGALERIFQAGMGEFTKAKASVAARGGAVEPALLLDGAR 120 SGGNL +LYQ A +N R GALERIF AGMGE+ K K ++ + LLDGAR Sbjct: 63 SGGNLQSLYQRAGNNNRT----GALERIFYAGMGEYLKGKNAMTPHS-TQDAVALLDGAR 117 Query: 121 RAMRAAYQREMDALESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVQQATLAAVAP 180 RAMRAAYQREMD+LESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANV QATLA VAP Sbjct: 118 RAMRAAYQREMDSLESHLAFLASVGSVSPYVGLFGTVWGIMNAFRGLANVHQATLATVAP 177 Query: 181 GIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLAIRFESFIEEFSNILQRQA 232 GIAEALIATAIGLFAAIPAVVAYNRYSHDIDRL+IRFE+FIEEFSNILQRQ+ Sbjct: 178 GIAEALIATAIGLFAAIPAVVAYNRYSHDIDRLSIRFETFIEEFSNILQRQS 229