BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0946.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF p... 384 e-105 ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalo... 274 1e-71 ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [... 265 5e-69 ref|YP_004754056.1| putative periplasmic protein [Collimonas fun... 260 1e-67 ref|YP_001100661.1| putative transmembrane protein [Herminiimona... 260 2e-67 >ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum seropedicae SmR1] gb|ADJ62732.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 246/251 (98%), Positives = 250/251 (99%) Query: 1 MHTAFKLKSVTVAALLAATAFLPLTARAGLFDDDEARKAILDIRSKIEALQRDVANKADK 60 MHTAFKLKSVTVAALLAATAFLPLTARAGLFDDDEARKAILDIRSKIEALQRDVANKADK Sbjct: 1 MHTAFKLKSVTVAALLAATAFLPLTARAGLFDDDEARKAILDIRSKIEALQRDVANKADK 60 Query: 61 NSVLTLSDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVD 120 NSVLTLSDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVD Sbjct: 61 NSVLTLSDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVD 120 Query: 121 GQTVAVGVSEQQAYDAALSQFKGGDYKGAANAFADFIKRYPQSGYAASAQYWQGNALYAQ 180 GQTVAVGVSEQQAYDAALSQFKGGDYKGAANAFADF+KRYPQSGYA SAQYWQGN+LYAQ Sbjct: 121 GQTVAVGVSEQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQ 180 Query: 181 RDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAA 240 RDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAA Sbjct: 181 RDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAA 240 Query: 241 QTGKDRMASLR 251 QTGK+RMASL+ Sbjct: 241 QTGKERMASLK 251 >ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32830.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 155/248 (62%), Positives = 201/248 (81%), Gaps = 4/248 (1%) Query: 8 KSVTVAALLAATAFLPLTARAGLFDDDEARKAILDIRSKIEALQRD----VANKADKNSV 63 KS+ A+LAA + L A+AGLFDDDEAR+AILDIR++I++++RD + K DKNS+ Sbjct: 6 KSLFAVAMLAAVSSFTLPAQAGLFDDDEARRAILDIRARIDSVRRDADIKLDTKPDKNSL 65 Query: 64 LTLSDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQT 123 L ++ +N+ L+ ++A LRGQ+EVLTNE+ N QQRQKDFYVDLD RLRKLEPQ++ VDG+ Sbjct: 66 LDVASQNEQLRQEVAKLRGQLEVLTNEVANTQQRQKDFYVDLDTRLRKLEPQKMTVDGKE 125 Query: 124 VAVGVSEQQAYDAALSQFKGGDYKGAANAFADFIKRYPQSGYAASAQYWQGNALYAQRDY 183 +V +EQ+ Y+AAL+ FK GDYK + AF DF++RYPQSG+A SAQY+ G YAQRDY Sbjct: 126 TSVEPAEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYAQRDY 185 Query: 184 KGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTG 243 + AI AQQVVVKNYP+NPKAADALLNIAS AELKD+ AAKK+LE L+A+YP++PAAQT Sbjct: 186 RNAITAQQVVVKNYPENPKAADALLNIASCYAELKDRPAAKKSLETLVAQYPSSPAAQTA 245 Query: 244 KDRMASLR 251 K+R+A+LR Sbjct: 246 KERLAALR 253 >ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp. Marseille] gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium sp. Marseille] Length = 243 Score = 265 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 157/245 (64%), Positives = 196/245 (80%), Gaps = 3/245 (1%) Query: 7 LKSVTVAALLAATAFLPLTARAGLFDDDEARKAILDIRSKIEALQRDVANKADKNSVLTL 66 +K +AAL+AA + L+A A LF DDEARKAI+++R K++ +Q+ +KA+ ++VL+L Sbjct: 2 IKKTLIAALMAAFSCASLSAHAALFGDDEARKAIIELRGKVDGIQQ---SKAETSAVLSL 58 Query: 67 SDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAV 126 S++N+ L+ +I+ L GQIEVL+NE+ N QQRQKDFYVDLD RLRKLEPQ V VDG+ V Sbjct: 59 SNQNEALKQEISRLNGQIEVLSNEVQNLQQRQKDFYVDLDNRLRKLEPQVVAVDGKDAMV 118 Query: 127 GVSEQQAYDAALSQFKGGDYKGAANAFADFIKRYPQSGYAASAQYWQGNALYAQRDYKGA 186 G SEQ AYD+AL+ FK GDYK + AF DF++RYP+S YA SAQYW GNA YAQRDYK A Sbjct: 119 GQSEQSAYDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAYYAQRDYKNA 178 Query: 187 IAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKDR 246 I AQQ ++K YPDNPKAADALLNIASSQ ELKD+AAAKKTLE L+AKYPN PAAQT K+R Sbjct: 179 ITAQQALLKKYPDNPKAADALLNIASSQTELKDRAAAKKTLESLVAKYPNAPAAQTAKER 238 Query: 247 MASLR 251 +AS + Sbjct: 239 LASFK 243 >ref|YP_004754056.1| putative periplasmic protein [Collimonas fungivorans Ter331] gb|AEK63233.1| Putative periplasmic protein [Collimonas fungivorans Ter331] Length = 249 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 154/227 (67%), Positives = 185/227 (81%) Query: 25 TARAGLFDDDEARKAILDIRSKIEALQRDVANKADKNSVLTLSDRNDNLQSQIAALRGQI 84 TARAGLFDDDEAR+AILDIRSKI+A+ V KADK S L LSD+ND L +IA LRGQI Sbjct: 23 TARAGLFDDDEARRAILDIRSKIDAVNAKVDTKADKTSSLNLSDQNDRLNQEIAKLRGQI 82 Query: 85 EVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSEQQAYDAALSQFKGG 144 EVLTNE+ N QQRQKDFYVDLD R+RKLEPQ+V VDGQ V++G ++Q+AYDAAL+ FK G Sbjct: 83 EVLTNELANTQQRQKDFYVDLDTRMRKLEPQKVSVDGQEVSIGANDQKAYDAALATFKAG 142 Query: 145 DYKGAANAFADFIKRYPQSGYAASAQYWQGNALYAQRDYKGAIAAQQVVVKNYPDNPKAA 204 DYK AA AF++F++ P SG A SAQY+ GN+ YA RDYK AIAAQQVVV Y DNPKAA Sbjct: 143 DYKTAATAFSNFVRSSPDSGLAPSAQYFLGNSYYALRDYKNAIAAQQVVVSKYADNPKAA 202 Query: 205 DALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKDRMASLR 251 DALL I+SS ELK+K +K+ LEQL+++YPNT AAQT K+R+A+L+ Sbjct: 203 DALLTISSSYTELKNKPQSKRALEQLLSQYPNTQAAQTAKERLATLK 249 >ref|YP_001100661.1| putative transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62540.1| Conserved hypothetical protein; putative TPR repeat [Herminiimonas arsenicoxydans] Length = 245 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 157/245 (64%), Positives = 196/245 (80%), Gaps = 3/245 (1%) Query: 7 LKSVTVAALLAATAFLPLTARAGLFDDDEARKAILDIRSKIEALQRDVANKADKNSVLTL 66 +K +AAL+AA + L+A A LF DDEAR+AILD+R+K++ALQ+ +KA+ +VL L Sbjct: 4 IKKTLIAALMAAFSCASLSAHAALFGDDEARRAILDVRTKVDALQQ---SKAESTAVLEL 60 Query: 67 SDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAV 126 +++N+ L+ +IA LRGQIEVL+NE+ NAQQRQKDFYVDLD RLRKLEPQ V VDGQ +V Sbjct: 61 ANQNEQLKQEIARLRGQIEVLSNEVANAQQRQKDFYVDLDNRLRKLEPQIVAVDGQEASV 120 Query: 127 GVSEQQAYDAALSQFKGGDYKGAANAFADFIKRYPQSGYAASAQYWQGNALYAQRDYKGA 186 +SEQ+ YD AL+ FK GDYK + AFADFI+RYPQS YA SAQYW GNA YAQRDY+ A Sbjct: 121 ELSEQRMYDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYAQRDYRNA 180 Query: 187 IAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKDR 246 I AQQ ++K YP NPKAADA+LNIASS ELKD+ AAKK LE L+A+YPNTPAAQT K+R Sbjct: 181 ITAQQALLKKYPANPKAADAMLNIASSYTELKDRTAAKKALESLVAQYPNTPAAQTAKER 240 Query: 247 MASLR 251 +A+ + Sbjct: 241 LANFK 245