BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0942.p (395 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001900971.1| peptidase S1 and S6 chymotrypsin/Hap [Ralsto... 199 7e-49 ref|YP_002983012.1| serine protease protein [Ralstonia pickettii... 199 9e-49 ref|ZP_07675276.1| serine protease [Ralstonia sp. 5_7_47FAA] >gi... 195 9e-48 gb|AEG67643.1| periplasmic protease; contains two pdz domain [Ra... 189 7e-46 emb|CBJ36472.1| putative serine protease protein [Ralstonia sola... 189 1e-45 >ref|YP_001900971.1| peptidase S1 and S6 chymotrypsin/Hap [Ralstonia pickettii 12J] gb|ACD28539.1| peptidase S1 and S6 chymotrypsin/Hap [Ralstonia pickettii 12J] Length = 306 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 107/213 (50%), Positives = 139/213 (65%) Query: 4 RLTKLLGLLGPLLAAAPPAHALDAETLFQQLSPSIWVVQAMDAQGQIFSTGSAVVIGPER 63 RL LL AA A AL+ +F ++SPS+W V+ + G+ S GSAVVI Sbjct: 5 RLVSLLAAAVVCAGAAERAVALEPAAVFAKVSPSVWEVRVAGSDGRPLSIGSAVVIADGV 64 Query: 64 LVTNCHVLARASSFKLRRGNLTLGGKLEFPDPERDLCQVRAEGLKAPAVTIAPARSLRVG 123 +TNCHVL L+RGN + G +L++PD ERDLCQ+R APAVT+AP +L G Sbjct: 65 AITNCHVLRGGKQVWLKRGNASYGARLQYPDVERDLCQLRVADFHAPAVTLAPGSALVTG 124 Query: 124 QKVFTLGAPRALEETISDGLLSALRLDNEGRLRFLQTSAPISSGSSGGGLFNDKGELIGI 183 QKV+ +G P LE TIS+GL+S+LR D+EGRL+ +QTSAPIS GSSGGGLF+ G LIGI Sbjct: 125 QKVYAVGNPLGLELTISEGLISSLRTDDEGRLKSIQTSAPISQGSSGGGLFDADGRLIGI 184 Query: 184 TTAMIAGATVQNLSFAVPAEWIRDLETRGRAVL 216 T + QNL+FA+PA+WI D+ RG+ L Sbjct: 185 TDHQVVLTMGQNLNFAIPADWIADVPARGQKSL 217 >ref|YP_002983012.1| serine protease protein [Ralstonia pickettii 12D] gb|ACS64340.1| putative serine protease protein [Ralstonia pickettii 12D] Length = 306 Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats. Identities = 106/213 (49%), Positives = 138/213 (64%) Query: 4 RLTKLLGLLGPLLAAAPPAHALDAETLFQQLSPSIWVVQAMDAQGQIFSTGSAVVIGPER 63 RL LL A A AL+ +F ++SPS+W V+ + G+ S GSAVVI Sbjct: 5 RLVSLLAAAVVCAGVAERAAALEPAAVFAKVSPSVWEVRVAGSDGRPLSIGSAVVIADGV 64 Query: 64 LVTNCHVLARASSFKLRRGNLTLGGKLEFPDPERDLCQVRAEGLKAPAVTIAPARSLRVG 123 +TNCHVL L+RGN + G +L++PD ERDLCQ+R APAVT+AP +L G Sbjct: 65 AITNCHVLRGGKQVWLKRGNASYGARLQYPDVERDLCQLRVADFHAPAVTLAPGSALVTG 124 Query: 124 QKVFTLGAPRALEETISDGLLSALRLDNEGRLRFLQTSAPISSGSSGGGLFNDKGELIGI 183 QKV+ +G P LE TIS+GL+S+LR D+EGRL+ +QTSAPIS GSSGGGLF+ G LIGI Sbjct: 125 QKVYAVGNPLGLELTISEGLISSLRTDDEGRLKSIQTSAPISQGSSGGGLFDADGRLIGI 184 Query: 184 TTAMIAGATVQNLSFAVPAEWIRDLETRGRAVL 216 T + QNL+FA+PA+WI D+ RG+ L Sbjct: 185 TDHQVVLTMGQNLNFAIPADWIADVPARGQKSL 217 >ref|ZP_07675276.1| serine protease [Ralstonia sp. 5_7_47FAA] gb|EFP66334.1| serine protease [Ralstonia sp. 5_7_47FAA] Length = 306 Score = 195 bits (496), Expect = 9e-48, Method: Composition-based stats. Identities = 104/213 (48%), Positives = 137/213 (64%) Query: 4 RLTKLLGLLGPLLAAAPPAHALDAETLFQQLSPSIWVVQAMDAQGQIFSTGSAVVIGPER 63 RL LL A A AL+ +F ++SPS+W V+ + G+ S GSAVVI Sbjct: 5 RLVSLLVAALVCAGVAERAVALEPAAVFAKVSPSVWEVRVAGSDGRPLSIGSAVVIADGV 64 Query: 64 LVTNCHVLARASSFKLRRGNLTLGGKLEFPDPERDLCQVRAEGLKAPAVTIAPARSLRVG 123 +TNCHVL L+RGN + G +L++PD ERDLCQ+R APAV ++P +L G Sbjct: 65 AITNCHVLRGGKQVWLKRGNASYGARLQYPDVERDLCQLRVADFHAPAVMLSPGSALVTG 124 Query: 124 QKVFTLGAPRALEETISDGLLSALRLDNEGRLRFLQTSAPISSGSSGGGLFNDKGELIGI 183 QKV+ +G P LE TIS+GL+S+LR D+EGRL+ +QTSAPIS GSSGGGLF+ G LIGI Sbjct: 125 QKVYAVGNPLGLELTISEGLISSLRTDDEGRLKSIQTSAPISQGSSGGGLFDADGRLIGI 184 Query: 184 TTAMIAGATVQNLSFAVPAEWIRDLETRGRAVL 216 T + QNL+FA+PA+WI D+ RG+ L Sbjct: 185 TDHQVVLTMGQNLNFAIPADWIADVPARGQKSL 217 >gb|AEG67643.1| periplasmic protease; contains two pdz domain [Ralstonia solanacearum Po82] Length = 321 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 108/228 (47%), Positives = 142/228 (62%), Gaps = 5/228 (2%) Query: 18 AAPPAHALDAETLFQQLSPSIWVVQAMDAQGQIFSTGSAVVIGPERLVTNCHVLARASSF 77 AA A AL+ +F ++SPS+W V+ + G+ S GSAVV G +TNCHVL Sbjct: 19 AAAQAIALEPAEVFAKVSPSVWEVRVIGPDGKGLSIGSAVVTGDGTAITNCHVLRGGKQV 78 Query: 78 KLRRGNLTLGGKLEFPDPERDLCQVRAEGLKAPAVTIAPARSLRVGQKVFTLGAPRALEE 137 L+RGN G +L++PD ERDLCQ+R PAVT+AP SL GQKV+ +G P LE Sbjct: 79 WLKRGNANFGARLQYPDVERDLCQLRVADFHYPAVTLAPGNSLVTGQKVYAIGNPLGLEL 138 Query: 138 TISDGLLSALRLDNEGRLRFLQTSAPISSGSSGGGLFNDKGELIGITTAMIAGATVQNLS 197 TIS+GL+S+LR D +GRL+ +QTSAPIS GSSGGGLF+ G LIGIT + QNL+ Sbjct: 139 TISEGLISSLRTDEDGRLKSVQTSAPISQGSSGGGLFDADGRLIGITDHQVILTLGQNLN 198 Query: 198 FAVPAEWIRDLETRGRAVLAKRNGTISTPTAATPAPPALTQPAPAAPP 245 FA+PA+WI ++ R A++ T A+ A P+ APA P Sbjct: 199 FAIPADWIAEVPAR-----AQKALAARTAAASAVAAPSTQGMAPAPAP 241 >emb|CBJ36472.1| putative serine protease protein [Ralstonia solanacearum CMR15] Length = 328 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 98/191 (51%), Positives = 129/191 (67%) Query: 18 AAPPAHALDAETLFQQLSPSIWVVQAMDAQGQIFSTGSAVVIGPERLVTNCHVLARASSF 77 AA A AL+ +FQ++SPS+W V+ + G+ S GSAVVIG +TNCHVL Sbjct: 19 AAAQAVALEPAEIFQKVSPSVWEVRVIGPDGKGLSMGSAVVIGDGVAITNCHVLRGGKQV 78 Query: 78 KLRRGNLTLGGKLEFPDPERDLCQVRAEGLKAPAVTIAPARSLRVGQKVFTLGAPRALEE 137 L+RGN G +L++PD ERDLCQ+R PAV +AP +L GQKV+ +G P LE Sbjct: 79 WLKRGNANFGARLQYPDVERDLCQLRVADFHYPAVALAPGSALVTGQKVYAIGNPLGLEL 138 Query: 138 TISDGLLSALRLDNEGRLRFLQTSAPISSGSSGGGLFNDKGELIGITTAMIAGATVQNLS 197 TIS+GL+S+LR D++GRL+ +QTSA IS GSSGGGLF+ G LIGIT + QNL+ Sbjct: 139 TISEGLISSLRTDDDGRLKSVQTSAAISRGSSGGGLFDANGRLIGITDHQVVLTLGQNLN 198 Query: 198 FAVPAEWIRDL 208 FA+PA+WI D+ Sbjct: 199 FAIPADWIADV 209