BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0934.p (268 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774423.1| microcystin-dependent protein [Herbaspirillu... 219 3e-55 ref|ZP_07052052.1| phage tail collar domain-containing protein [... 72 7e-11 ref|YP_003841574.1| Tail Collar domain-containing protein [Clost... 72 1e-10 ref|YP_001821126.1| tail collar domain-containing protein [Opitu... 67 2e-09 emb|CAM75352.1| Phage Tail Collar [Magnetospirillum gryphiswalde... 63 4e-08 >ref|YP_003774423.1| microcystin-dependent protein [Herbaspirillum seropedicae SmR1] gb|ADJ62515.1| microcystin-dependent protein [Herbaspirillum seropedicae SmR1] Length = 281 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 149/260 (57%), Positives = 185/260 (71%), Gaps = 1/260 (0%) Query: 8 WSSSSHACSDTPVLASVCIMATPATYGSFNNAYVPATGQLLSVNQYAALYSLIGATYGSE 67 W+ +S ACSDTPVLASVCIMA P ++GSFN YV A GQ LS+NQY ALYSLIG TYG Sbjct: 23 WAPNSFACSDTPVLASVCIMAVPPSFGSFNRQYVLAAGQQLSINQYTALYSLIGITYGGN 82 Query: 68 SNSNFKLPDLRGRVIIGANTDGTFPAGKKGGQASVTLTMDQLPQHQFFIPSAAVNLSGIK 127 + + F LPDLRGRV++GAN TFPAG GG S+ L++ QLP H F + + V+LS + Sbjct: 83 AQTTFNLPDLRGRVLVGANGT-TFPAGATGGNTSINLSIAQLPPHNFVVAAIPVDLSRVT 141 Query: 128 ATTTLSSLSGTADLAGVTVSGPPTGLVIKTVSGSGGQGTPSGNYLGKPPAATANLYANGT 187 ATT LS LS T +L+GVT++G P+GL I S +GG +P GNYLGKP AA A Y + Sbjct: 142 ATTMLSGLSATTNLSGVTIAGTPSGLTIAASSTNGGVASPDGNYLGKPAAAAAAAYTSVA 201 Query: 188 PDSNLNNNALGGTMTLTVAAGSTAPVAVTGNANTTISGSGATTPGVTNTLGGGVPINLLP 247 P+ LN+ ++GG M++T++ +TAPV++T TT G AT GVTNTLG G I +P Sbjct: 202 PNVTLNSASIGGQMSMTISNAATAPVSITSGGATTAIGGSATATGVTNTLGTGAAIPTMP 261 Query: 248 PYLAMTYYIAAKNGIYPSRD 267 PYLAMTYYIAA NGIYPSRD Sbjct: 262 PYLAMTYYIAAANGIYPSRD 281 >ref|ZP_07052052.1| phage tail collar domain-containing protein [Lysinibacillus fusiformis ZC1] gb|EFI66451.1| phage tail collar domain-containing protein [Lysinibacillus fusiformis ZC1] Length = 231 Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 82/235 (34%), Positives = 113/235 (48%), Gaps = 29/235 (12%) Query: 38 NAYVPATGQLLSVNQYAALYSLIGATYGSESNSNFKLPDLRGRVIIGANTD---GTFPAG 94 + ++ GQ L +NQY A+YSLIG YG + + FKLPDLRGRV +G P G Sbjct: 18 DGWLLCQGQELPINQYQAIYSLIGVKYGGNATTTFKLPDLRGRVPVGMGQGVGLANRPIG 77 Query: 95 KKGGQASVTLTMDQLPQHQFFIPSAAVNLSGIKATTTLSSLSGTADLAGVTVSGPPTGLV 154 + G +VTL Q+P H I + +N + A + S+S A VTV+ P Sbjct: 78 QMAGSENVTLQTGQIPPH---IHTVTLN-NTFSAGISGGSISNGA--CEVTVNLPKNA-- 129 Query: 155 IKTVSGSGGQGTPSGNYLGKPPAAT---ANLYANGTPDSNLNNNALGGTMTLTVAAGSTA 211 +V G+ S LG AT N+Y+ +PD+ L N+++ T T+T T Sbjct: 130 -TSVPGNTTSVPGSNKCLGVAKTATNQDVNIYSTNSPDTTLQNDSVNATGTVTGTVTGTV 188 Query: 212 PVAVTGNANTTISGSGATTPGVTNTLGGGVPINLLPPYLAMTYYIAAKNGIYPSR 266 VTG NT I+GSG PI + PYL + Y I + GIYP R Sbjct: 189 NGTVTGTVNTGITGSGT-------------PIANMQPYLVINYIICYQ-GIYPMR 229 >ref|YP_003841574.1| Tail Collar domain-containing protein [Clostridium cellulovorans 743B] ref|ZP_07628991.1| Tail Collar domain-containing protein [Clostridium cellulovorans 743B] gb|ADL49810.1| Tail Collar domain protein [Clostridium cellulovorans 743B] Length = 199 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 76/231 (32%), Positives = 108/231 (46%), Gaps = 52/231 (22%) Query: 39 AYVPATGQLLSVNQYAALYSLIGATYGSESNSNFKLPDLRGRVIIGANTDG--TFPAGKK 96 ++ GQ L +NQY ALYSL+G TYG ++ FKLPDLRGRV +G+ G F G Sbjct: 19 GWLACEGQELPINQYTALYSLLGTTYGGNGSTTFKLPDLRGRVPVGSGICGGINFQQGNS 78 Query: 97 GGQASVTLTMDQLPQHQFFIPSAAVNLSGIKATTTLSSLSGTADLAGVTVSGPPTGLVIK 156 GG +VTLT Q+P H + S T VTV+G Sbjct: 79 GGNFNVTLTQQQMPAH---------------------THSTTVTQGAVTVNG-------- 109 Query: 157 TVSGSGGQGTPSGNYLGKPPAATANLYANGTPDSNLNNNALGGTMTLTVAAGSTAPVAVT 216 + +GG+GT + P+A++ L T ++ N + S A +VT Sbjct: 110 GIPFNGGEGTTN------TPSASSKLAVGITAGGDIPN----------IYNTSEATGSVT 153 Query: 217 GNANTTISGSGATTPGVTNTLGGGVPINLLPPYLAMTYYIAAKNGIYPSRD 267 G + +G T + GG +N++ P+LA+ Y IA + GIYPSRD Sbjct: 154 G----SFTGQVTGTTVTVGSAGGNQGVNVMQPFLALRYIIATE-GIYPSRD 199 >ref|YP_001821126.1| tail collar domain-containing protein [Opitutus terrae PB90-1] gb|ACB77526.1| Tail Collar domain protein [Opitutus terrae PB90-1] Length = 207 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 66/227 (29%), Positives = 93/227 (40%), Gaps = 41/227 (18%) Query: 45 GQLLSVNQYAALYSLIGATYGSESNSNFKLPDLRGRVIIGANTDGTFP-----AGKKGGQ 99 GQLL + Q AL++L+G TYG +NF LPDLRGRV +GA P + GG Sbjct: 16 GQLLPIAQNQALFALLGTTYGGNGQTNFALPDLRGRVPVGATNTSGSPLPPVQVAQTGGT 75 Query: 100 ASVTLTMDQLPQHQFFIPSAAVNLSGIKATTTLSSLSGTADLAGVTVSGPPTGLVIKTVS 159 V LTM++LP H + L+ G S P + + S Sbjct: 76 PQVQLTMNELPMH--------------------NHLATFTGTGGGGGSSPQVAVKVGVTS 115 Query: 160 GSGGQGTPSGNYLGKPPAATANLYANGTPDSNLNNNALGGTMTLTVAAGSTAPVAVTGNA 219 +G TP GN L P A N P + + L G ++ Sbjct: 116 TTGTLNTPGGNVLAAAPTAGPNQALVYAPSTANLDGELAG---------------ISVAV 160 Query: 220 NTTISGSGATTPGVTNTLGGGVPINLLPPYLAMTYYIAAKNGIYPSR 266 G N GGG P +++PP++ + + IA + GI+PSR Sbjct: 161 TGGGGGGITGGTVTVNPSGGGQPFSIMPPFIGINFVIALE-GIFPSR 206 >emb|CAM75352.1| Phage Tail Collar [Magnetospirillum gryphiswaldense MSR-1] Length = 233 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 51/257 (19%) Query: 12 SHACS-DTPVLASVCIMATPATYGSFNNAYVPATGQLLSVNQYAALYSLIGATYGSESNS 70 +HAC+ ++P++ VC +A + + +PA G+ L++++Y AL++LIG +G + ++ Sbjct: 25 AHACNGESPLMGEVCAVA----FNYCPESTLPADGRKLAISEYQALFALIGTQFGGDGST 80 Query: 71 NFKLPDLRGRVIIGANTDGTFPA-GKKGGQASVTLTMDQLPQHQFFIPSAAVNLSGIKAT 129 NF LP+L GR I+GAN PA GGQ SV LT Q+P H A Sbjct: 81 NFALPNLNGRSIVGANLKNGAPAFAVAGGQESVALTAAQVPAHT-------------HAA 127 Query: 130 TTLSSLSGTADLAGVTVSGPPTGLVIKTVSGSGGQGTPSGNYLGKPPAATANLYANGTPD 189 + +SL+ T + GL V+ SG + + + G TAN A TP Sbjct: 128 SLTASLTVTPQVVAT------QGLGNNPVAQSGNKLSTNN---GSAGFTTANFAAYTTPA 178 Query: 190 SNLNNNALGGTMTLTVAAGSTAPVAVTGNANTTISGSGATTPGVTNTLGGGVPINLLPPY 249 + ALGG + T SGSG T N G P+ +PP Sbjct: 179 TAGTTVALGGV-------------------SNTFSGSGQVT---VNPTGASQPVATIPPQ 216 Query: 250 LAMTYYIAAKNGIYPSR 266 LA+ + + G+YP R Sbjct: 217 LALQFCVTV-TGLYPER 232