BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0932.p (248 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774530.1| transketolase, C-terminal subunit [Herbaspir... 487 e-136 ref|YP_001793291.1| transketolase central region [Leptothrix cho... 436 e-120 ref|YP_004418437.1| transketolase central region [Pusillimonas s... 399 e-109 ref|YP_002945196.1| transketolase [Variovorax paradoxus S110] >g... 391 e-107 ref|YP_004379490.1| transketolase central region [Pseudomonas me... 390 e-106 >ref|YP_003774530.1| transketolase, C-terminal subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62622.1| transketolase, C-terminal subunit, protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 238/248 (95%), Positives = 243/248 (97%) Query: 1 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA 60 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA Sbjct: 87 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA 146 Query: 61 MMRAIPGMTIIDPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYQFELGKAKE 120 MMRAIPGMTI+DPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDY+FELG+AKE Sbjct: 147 MMRAIPGMTIVDPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYRFELGRAKE 206 Query: 121 IRDGNDVLIISSGFMTMRALEVAKALEADNVSVGVLHCPTIKPFDEATVVEQVSKKNRLV 180 IRDGNDVLIISSGFMTMRALEVAKALEAD VSV VLHCPTIKPFDEATVV QV KKNRLV Sbjct: 207 IRDGNDVLIISSGFMTMRALEVAKALEADKVSVAVLHCPTIKPFDEATVVAQVKKKNRLV 266 Query: 181 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQMAGLPDAFLDAGALPTLHDRYGISCEVLS 240 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQ+AGLPDAFLDAGALPTLHDRYGISCEVL Sbjct: 267 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQLAGLPDAFLDAGALPTLHDRYGISCEVLG 326 Query: 241 RRIREWLK 248 RRI+EWLK Sbjct: 327 RRIKEWLK 334 >ref|YP_001793291.1| transketolase central region [Leptothrix cholodnii SP-6] gb|ACB36526.1| Transketolase central region [Leptothrix cholodnii SP-6] Length = 338 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 207/247 (83%), Positives = 230/247 (93%) Query: 1 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA 60 MAKEGL+PFATTYAVF TRRAYDFIHQVIAEENLNVK+CCALPGLTTGYGPSHQAT+D+A Sbjct: 91 MAKEGLIPFATTYAVFGTRRAYDFIHQVIAEENLNVKMCCALPGLTTGYGPSHQATDDIA 150 Query: 61 MMRAIPGMTIIDPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYQFELGKAKE 120 MMRAIPG+TI+DPCDALDLEQAVPQIAAH+GPVYMRLARGNVPLVLDEYDY FELGKAK Sbjct: 151 MMRAIPGLTIVDPCDALDLEQAVPQIAAHKGPVYMRLARGNVPLVLDEYDYSFELGKAKM 210 Query: 121 IRDGNDVLIISSGFMTMRALEVAKALEADNVSVGVLHCPTIKPFDEATVVEQVSKKNRLV 180 +R+GN+VL+ISSGFMTMRALEVA+ L ADN+ V VLHCPTIKP DEAT++E V K+RLV Sbjct: 211 LREGNEVLVISSGFMTMRALEVAQTLAADNIGVAVLHCPTIKPLDEATIIEAVKYKHRLV 270 Query: 181 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQMAGLPDAFLDAGALPTLHDRYGISCEVLS 240 V+AENHSV+GGLGE VA+ L+RHRVQPAGFQMAGLPDA+LDAGALPTLHDRYGIS E L+ Sbjct: 271 VIAENHSVIGGLGEAVASALLRHRVQPAGFQMAGLPDAYLDAGALPTLHDRYGISREALA 330 Query: 241 RRIREWL 247 RI+ WL Sbjct: 331 GRIKGWL 337 >ref|YP_004418437.1| transketolase central region [Pusillimonas sp. T7-7] gb|AEC21813.1| transketolase central region [Pusillimonas sp. T7-7] Length = 333 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 191/248 (77%), Positives = 220/248 (88%), Gaps = 1/248 (0%) Query: 1 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA 60 MAKEG PF TTYAVF TRRAYDFIHQ+IAEE+LNVKICCALPGLTTGYGPSHQAT+D+A Sbjct: 87 MAKEGFTPFVTTYAVFGTRRAYDFIHQIIAEEHLNVKICCALPGLTTGYGPSHQATDDIA 146 Query: 61 MMRAIPGMTIIDPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYQFELGKAKE 120 MMRA+PG+TI+DPCDALD++QAVP+IAAH GPVYMRL RGNVP+VLDEYDY+FELGKAK Sbjct: 147 MMRAVPGLTIVDPCDALDIKQAVPEIAAHPGPVYMRLLRGNVPVVLDEYDYKFELGKAKR 206 Query: 121 IRDGNDVLIISSGFMTMRALEVAKALEADNVSVGVLHCPTIKPFDEATVVEQVSKKNRLV 180 + DGNDVLIISSG +TMRALEVAKAL+ +NV V VLH PTIKP D AT++++ + RLV Sbjct: 207 LCDGNDVLIISSGLLTMRALEVAKALKKENVGVAVLHVPTIKPLDRATILKEAGRSGRLV 266 Query: 181 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQMAGLPDAFLDAGALPTLHDRYGISCEVLS 240 VVAENHSV+GGLGE VA L+ + V PA F++AGLPD FLDAGALPTLHDRYGIS EVLS Sbjct: 267 VVAENHSVMGGLGEAVAVLLLENGVTPA-FRLAGLPDEFLDAGALPTLHDRYGISTEVLS 325 Query: 241 RRIREWLK 248 +RI++WLK Sbjct: 326 QRIKQWLK 333 >ref|YP_002945196.1| transketolase [Variovorax paradoxus S110] gb|ACS19930.1| Transketolase central region [Variovorax paradoxus S110] Length = 332 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 188/247 (76%), Positives = 214/247 (86%), Gaps = 1/247 (0%) Query: 1 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA 60 MAKEG +PFATTYAVF TRRAYDF+HQVIAEENLNVK+CCALPGLTTGYGPSHQATEDLA Sbjct: 87 MAKEGFIPFATTYAVFGTRRAYDFVHQVIAEENLNVKMCCALPGLTTGYGPSHQATEDLA 146 Query: 61 MMRAIPGMTIIDPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYQFELGKAKE 120 +MR IPG+TIIDPCDALD+EQAVPQ+A HQGPVYMRL RGNVP VLDEYDY+FELGKAK Sbjct: 147 LMRGIPGLTIIDPCDALDIEQAVPQMADHQGPVYMRLPRGNVPRVLDEYDYKFELGKAKL 206 Query: 121 IRDGNDVLIISSGFMTMRALEVAKALEADNVSVGVLHCPTIKPFDEATVVEQVSKKNRLV 180 IRDG VL+I+SGFMTMR+LEVA+ L D V + VLH PTIKP DEAT++ +V + RLV Sbjct: 207 IRDGKSVLVIASGFMTMRSLEVAEQLRNDGVDIAVLHVPTIKPLDEATILAEVRRLGRLV 266 Query: 181 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQMAGLPDAFLDAGALPTLHDRYGISCEVLS 240 VVAENHSV+GGLGE VA LMR V A ++ GLPDAFLDAGALPTLHDRYGIS +++S Sbjct: 267 VVAENHSVIGGLGEAVAGLLMRSGVSTA-YRQIGLPDAFLDAGALPTLHDRYGISAQMMS 325 Query: 241 RRIREWL 247 R+I+ W+ Sbjct: 326 RQIKGWV 332 >ref|YP_004379490.1| transketolase central region [Pseudomonas mendocina NK-01] gb|AEB57738.1| transketolase central region [Pseudomonas mendocina NK-01] Length = 332 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 192/247 (77%), Positives = 210/247 (85%), Gaps = 1/247 (0%) Query: 1 MAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLA 60 MAKEG VPFATTYAVFATRRA+DF+HQVIAEENLNVK+CCALPGLTTGYGPSHQATED+A Sbjct: 86 MAKEGFVPFATTYAVFATRRAFDFVHQVIAEENLNVKLCCALPGLTTGYGPSHQATEDIA 145 Query: 61 MMRAIPGMTIIDPCDALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYQFELGKAKE 120 +MR IPGMTI+DPCDALD EQAVPQIAAH GPVYMRL RGNVPLVLDEY Y FELGKAK Sbjct: 146 LMRGIPGMTIVDPCDALDTEQAVPQIAAHNGPVYMRLLRGNVPLVLDEYGYSFELGKAKM 205 Query: 121 IRDGNDVLIISSGFMTMRALEVAKALEADNVSVGVLHCPTIKPFDEATVVEQVSKKNRLV 180 +RDG DVL+ISSG +TMRALEVAKALEAD + VGVLH PTIKP D AT++ + K RLV Sbjct: 206 LRDGRDVLVISSGILTMRALEVAKALEADRIDVGVLHVPTIKPLDVATILREAGKAGRLV 265 Query: 181 VVAENHSVVGGLGEIVATTLMRHRVQPAGFQMAGLPDAFLDAGALPTLHDRYGISCEVLS 240 VVAENH+ VGGLGE VAT L+ V P F+ LPDAFLDAGALPTLHDRYGIS E +S Sbjct: 266 VVAENHTSVGGLGEAVATALLTAGVTPQ-FRQIALPDAFLDAGALPTLHDRYGISTEAMS 324 Query: 241 RRIREWL 247 I+ WL Sbjct: 325 ATIKGWL 331