BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0928.p (189 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07231686.1| hypothetical protein PsyrptM_11552 [Pseudomon... 214 7e-54 ref|ZP_03394911.1| conserved hypothetical protein [Pseudomonas s... 213 1e-53 ref|NP_794386.1| hypothetical protein PSPTO_4635 [Pseudomonas sy... 210 7e-53 ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniob... 183 1e-44 ref|YP_001319515.1| hypothetical protein Amet_1679 [Alkaliphilus... 159 3e-37 >ref|ZP_07231686.1| hypothetical protein PsyrptM_11552 [Pseudomonas syringae pv. tomato Max13] ref|ZP_07254033.1| hypothetical protein PsyrptK_21113 [Pseudomonas syringae pv. tomato K40] ref|ZP_07259465.1| hypothetical protein PsyrptN_18884 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 189 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 110/163 (67%), Positives = 124/163 (76%) Query: 22 IVLTGLLDDIQKSDAGIVLGSKVMPDGTPSDRLRARLDKTAELYRQGMFPCIIVSGGTGK 81 I + GL D+ Q SDA IVLGSKV PDG PS RL+ARLD+ ELYRQG IIVSGGTG Sbjct: 22 IAMDGLSDNAQTSDAAIVLGSKVTPDGVPSARLQARLDRAVELYRQGRVRNIIVSGGTGV 81 Query: 82 EGFSEAQVMAAYLSEVQSVPRSAILLDEQGNTTMATAVNSAAIMQAHGFHSALVVTQFFH 141 EGFSEA MA YL+E +PR AILLDEQGNTT TA NSA IM+ GF SA+VVTQ+FH Sbjct: 82 EGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVVVTQYFH 141 Query: 142 IPRSRYALHRVGIDTVHSAHANYFEARDFYSLAREMIALPAYW 184 I RSRYAL++ G+ V +AHA YFE RD YSLARE+ ALPAYW Sbjct: 142 ITRSRYALYQAGVTQVSTAHARYFEWRDLYSLAREVAALPAYW 184 >ref|ZP_03394911.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gb|EEB62154.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] Length = 166 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 109/161 (67%), Positives = 123/161 (76%) Query: 24 LTGLLDDIQKSDAGIVLGSKVMPDGTPSDRLRARLDKTAELYRQGMFPCIIVSGGTGKEG 83 + GL D+ Q SDA IVLGSKV PDG PS RL+ARLD+ ELYRQG IIVSGGTG EG Sbjct: 1 MDGLSDNAQTSDAAIVLGSKVTPDGVPSARLQARLDRAVELYRQGRVRNIIVSGGTGVEG 60 Query: 84 FSEAQVMAAYLSEVQSVPRSAILLDEQGNTTMATAVNSAAIMQAHGFHSALVVTQFFHIP 143 FSEA MA YL+E +PR AILLDEQGNTT TA NSA IM+ GF SA+VVTQ+FHI Sbjct: 61 FSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQIMKQRGFKSAVVVTQYFHIT 120 Query: 144 RSRYALHRVGIDTVHSAHANYFEARDFYSLAREMIALPAYW 184 RSRYAL++ G+ V +AHA YFE RD YSLARE+ ALPAYW Sbjct: 121 RSRYALYQAGVTQVSTAHARYFEWRDLYSLAREVAALPAYW 161 >ref|NP_794386.1| hypothetical protein PSPTO_4635 [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO58081.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 189 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 113/181 (62%), Positives = 131/181 (72%), Gaps = 2/181 (1%) Query: 4 LILITTSVLLIVMTCLLGIVLTGLLDDIQKSDAGIVLGSKVMPDGTPSDRLRARLDKTAE 63 L L++ L I+ LL V+ G+ D + SD IVLGSKV PDG PS RL+ARLD+ E Sbjct: 6 LTLLSLGTLFILSASLL--VIDGVSDTAKTSDVAIVLGSKVTPDGVPSARLQARLDRAVE 63 Query: 64 LYRQGMFPCIIVSGGTGKEGFSEAQVMAAYLSEVQSVPRSAILLDEQGNTTMATAVNSAA 123 LYRQG IIVSGGTG EGFSEA MA YL+E +PR AILLDEQGNTT TA NSA Sbjct: 64 LYRQGRVRNIIVSGGTGVEGFSEAVGMANYLAERSGLPREAILLDEQGNTTKDTARNSAQ 123 Query: 124 IMQAHGFHSALVVTQFFHIPRSRYALHRVGIDTVHSAHANYFEARDFYSLAREMIALPAY 183 IM+ GF SA+VVTQ+FHI RSRYAL++ G+ V +AHA YFE RD YSLARE+ ALPAY Sbjct: 124 IMKQRGFKSAVVVTQYFHITRSRYALYQAGVTQVSTAHARYFEWRDLYSLAREVAALPAY 183 Query: 184 W 184 W Sbjct: 184 W 184 >ref|ZP_03131340.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428] gb|EDY18076.1| protein of unknown function DUF218 [Chthoniobacter flavus Ellin428] Length = 193 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 97/182 (53%), Positives = 120/182 (65%), Gaps = 1/182 (0%) Query: 2 KRLILITTSVLLIVMTCLLGIVLTGLLDDIQKSDAGIVLGSKVMPDGTPSDRLRARLDKT 61 KRL L +VL + + +V+ GL DD+ +D G+VLGSKV +GTPS RLRARLD+T Sbjct: 8 KRLFLSLVAVLGFLHLGTIVLVIAGLRDDLGHADVGLVLGSKVETNGTPSTRLRARLDRT 67 Query: 62 AELYRQGMFPCIIVSGGTGKEGFSEAQVMAAYLSEVQSVPRSAILLDEQGNTTMATAVNS 121 E YR G FP IIVSGG GKEG+ EA VM YL +P ILLD +G TT A+A N+ Sbjct: 68 LECYRAGYFPEIIVSGGIGKEGYDEAIVMRDYLV-AHGLPGEHILLDNKGVTTFASARNT 126 Query: 122 AAIMQAHGFHSALVVTQFFHIPRSRYALHRVGIDTVHSAHANYFEARDFYSLAREMIALP 181 I Q FHS V++Q+FH+PR+R ALHR G TV+SAHA YFE RD YS RE+ Sbjct: 127 RDIAQQRNFHSVFVISQYFHLPRARLALHRFGFTTVYSAHAQYFELRDIYSAPRELFGYL 186 Query: 182 AY 183 +Y Sbjct: 187 SY 188 >ref|YP_001319515.1| hypothetical protein Amet_1679 [Alkaliphilus metalliredigens QYMF] gb|ABR47856.1| protein of unknown function DUF218 [Alkaliphilus metalliredigens QYMF] Length = 196 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 84/184 (45%), Positives = 112/184 (60%), Gaps = 2/184 (1%) Query: 1 MKRLILITTSVLLI-VMTCLLGIVLTGLLDDIQKSDAGIVLGSKVMPDGTPSDRLRARLD 59 + + I VL I V +L GL D + +DA +VLG+KV DGTPS RL+ RLD Sbjct: 9 LNKTIRYILGVLFIWVAVHVLITTFDGLNDKTEIADAAVVLGNKVELDGTPSPRLQGRLD 68 Query: 60 KTAELYRQGMFPCIIVSGGTGKEGFSEAQVMAAYLSEVQSVPRSAILLDEQGNTTMATAV 119 K ELY +G F +IVSGGTGKEGF EA VM YL + +P ++LD++G +M TA Sbjct: 69 KAVELYEKGYFNYVIVSGGTGKEGFDEALVMKDYLVK-NEIPDDKVILDQEGYNSMMTAK 127 Query: 120 NSAAIMQAHGFHSALVVTQFFHIPRSRYALHRVGIDTVHSAHANYFEARDFYSLAREMIA 179 N+ IM S V++QF+HI R++ A +VG + V+SAHA YF+ RD YS+ARE Sbjct: 128 NTKIIMDHMDLESVTVISQFYHITRTKLAFRKVGFEQVYSAHAEYFDFRDIYSIAREFAG 187 Query: 180 LPAY 183 Y Sbjct: 188 YYKY 191