BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0922.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774522.1| transcription regulator protein [Herbaspiril... 546 e-153 ref|YP_004752106.1| putative transcriptional regulator [Collimon... 496 e-138 ref|ZP_08274004.1| Phosphogluconate repressor HexR, RpiR family ... 426 e-117 ref|YP_001099389.1| RpiR family transcriptional regulator [Hermi... 423 e-116 ref|YP_001354004.1| RpiR family transcriptional regulator [Janth... 414 e-113 >ref|YP_003774522.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62614.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 286 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 286/286 (100%), Positives = 286/286 (100%) Query: 1 MSMLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIG 60 MSMLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIG Sbjct: 1 MSMLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIG 60 Query: 61 YEGWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQ 120 YEGWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQ Sbjct: 61 YEGWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQ 120 Query: 121 LALDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCV 180 LALDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCV Sbjct: 121 LALDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCV 180 Query: 181 VAISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISA 240 VAISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISA Sbjct: 181 VAISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISA 240 Query: 241 RLAHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR 286 RLAHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR Sbjct: 241 RLAHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR 286 >ref|YP_004752106.1| putative transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61283.1| putative transcriptional regulator [Collimonas fungivorans Ter331] Length = 286 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 258/286 (90%), Positives = 274/286 (95%) Query: 1 MSMLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIG 60 M+MLLD+IRT I+ LSKSEKKVA TIL NPQLALAEN+TALAKNA+VSEPTV+RFCRAIG Sbjct: 1 MTMLLDAIRTQIDLLSKSEKKVALTILDNPQLALAENITALAKNAQVSEPTVVRFCRAIG 60 Query: 61 YEGWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQ 120 YEGWHDFKLKLAQSLA+ALPGA+E LAQDD+AADLVNKICSRSINTLLDLRNHL+ DAIQ Sbjct: 61 YEGWHDFKLKLAQSLAVALPGANEMLAQDDIAADLVNKICSRSINTLLDLRNHLSADAIQ 120 Query: 121 LALDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCV 180 ALDVL +ANKIEFYGQGTSGIVA DAQHKFFRSGVPTVAYSDPHIHSIAASLL+ GD V Sbjct: 121 KALDVLLKANKIEFYGQGTSGIVAADAQHKFFRSGVPTVAYSDPHIHSIAASLLQPGDAV 180 Query: 181 VAISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISA 240 VAISQRGGNAALLRS+QLARKGGADIIVLGPSGTPLAELATVLVPIDLSFN DPYTPISA Sbjct: 181 VAISQRGGNAALLRSVQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNTDPYTPISA 240 Query: 241 RLAHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR 286 RLAHLVVIDILAVGLAL+RGPEFRKKMQNAQK+LQ+FDMQFDSFFR Sbjct: 241 RLAHLVVIDILAVGLALKRGPEFRKKMQNAQKALQQFDMQFDSFFR 286 >ref|ZP_08274004.1| Phosphogluconate repressor HexR, RpiR family [Oxalobacteraceae bacterium IMCC9480] gb|EGF32524.1| Phosphogluconate repressor HexR, RpiR family [Oxalobacteraceae bacterium IMCC9480] Length = 293 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 219/284 (77%), Positives = 254/284 (89%) Query: 3 MLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIGYE 62 MLLDS+RT +++LSKSE+KV +L +P LA++ N+TALA++A+VSEPTV+RFCRA+G+E Sbjct: 1 MLLDSVRTQLDALSKSERKVGLAVLRDPTLAVSGNITALARSAQVSEPTVVRFCRAVGFE 60 Query: 63 GWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQLA 122 GW FKLKLAQ+LA+ALPGA+E L +DLAADLV KICSRSIN LLDLRN L+P AI+ A Sbjct: 61 GWQAFKLKLAQALAVALPGANENLTPNDLAADLVGKICSRSINALLDLRNTLDPAAIERA 120 Query: 123 LDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCVVA 182 LD+LA+A KIEFYGQG+SGI+A DAQHKFFRSGVPTVAYSDPHIHSIAASLLK GD V+A Sbjct: 121 LDLLAKARKIEFYGQGSSGIIATDAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDVVLA 180 Query: 183 ISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISARL 242 ISQRG + ALLRS+QLARK GAD+I L PSGTPLA+LATVLVPIDL F+ DPYTPISARL Sbjct: 181 ISQRGNSVALLRSVQLARKVGADVIALSPSGTPLADLATVLVPIDLHFHTDPYTPISARL 240 Query: 243 AHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR 286 AHLVVIDILAVGLALRRGPEFRK+MQ+AQK+LQK DMQFDSF R Sbjct: 241 AHLVVIDILAVGLALRRGPEFRKQMQSAQKALQKIDMQFDSFLR 284 >ref|YP_001099389.1| RpiR family transcriptional regulator [Herminiimonas arsenicoxydans] emb|CAL61262.1| putative HTH-type transcriptional regulator HexR (Hex regulon repressor) [Herminiimonas arsenicoxydans] Length = 283 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 222/284 (78%), Positives = 251/284 (88%), Gaps = 1/284 (0%) Query: 3 MLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIGYE 62 MLLDSIRT +SLSKSEKKVA +L P+LA+AEN+TALAK A+VSEPTV+RFCRAIG++ Sbjct: 1 MLLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKADVSEPTVVRFCRAIGFD 60 Query: 63 GWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQLA 122 GWH FK+KLAQ LALA PGADE+ A +DLA DLV+KICSRSINTLLDLRN L+ +AI+ A Sbjct: 61 GWHAFKMKLAQGLALA-PGADESPAPEDLATDLVSKICSRSINTLLDLRNSLDANAIEQA 119 Query: 123 LDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCVVA 182 L VLARAN+IEFYGQGTSGI+A DAQHKFFRSG+PTVAY+DPHIHSIAASLLK GD VVA Sbjct: 120 LQVLARANRIEFYGQGTSGIIAADAQHKFFRSGIPTVAYADPHIHSIAASLLKKGDAVVA 179 Query: 183 ISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISARL 242 ISQRG + ALLRS+QLAR GAD+++L PSGTPLAELATVL+PIDL F+ DPYTPISARL Sbjct: 180 ISQRGNSIALLRSVQLARSCGADVVILAPSGTPLAELATVLIPIDLHFHTDPYTPISARL 239 Query: 243 AHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR 286 AHLVVIDILAVGLALR PE RKKM NAQK+LQK +MQFDSF R Sbjct: 240 AHLVVIDILAVGLALRLSPERRKKMLNAQKALQKIEMQFDSFLR 283 >ref|YP_001354004.1| RpiR family transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR88732.1| transcriptional regulator, RpiR family [Janthinobacterium sp. Marseille] Length = 286 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 218/284 (76%), Positives = 245/284 (86%) Query: 3 MLLDSIRTHINSLSKSEKKVAATILANPQLALAENLTALAKNAEVSEPTVIRFCRAIGYE 62 MLLDSIRT +SLSKSEKKVA +L P+LA+AEN+TALAK AEVSEPTV+RFCRAIG++ Sbjct: 1 MLLDSIRTQYDSLSKSEKKVALAVLEQPELAIAENITALAKKAEVSEPTVVRFCRAIGFD 60 Query: 63 GWHDFKLKLAQSLALALPGADETLAQDDLAADLVNKICSRSINTLLDLRNHLNPDAIQLA 122 GW FKLKLAQ LALA DE+ +D+AADLV+K+C+RSINTLLDLRN L+ +AI+ A Sbjct: 61 GWQAFKLKLAQGLALAPGTGDESPMLEDMAADLVDKVCNRSINTLLDLRNSLDANAIEQA 120 Query: 123 LDVLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTVAYSDPHIHSIAASLLKAGDCVVA 182 L VL RAN IEFYGQGTSGI+A DAQHKFFRSGVPTVAYSDPHIHSIAASLLK GD VVA Sbjct: 121 LQVLGRANTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDVVVA 180 Query: 183 ISQRGGNAALLRSIQLARKGGADIIVLGPSGTPLAELATVLVPIDLSFNIDPYTPISARL 242 ISQRG + +LLRS+QLAR GA I+VL PSGTPLAELATVL+PIDL F+ DPYTPISARL Sbjct: 181 ISQRGSSLSLLRSVQLARSSGAAIVVLAPSGTPLAELATVLIPIDLHFHTDPYTPISARL 240 Query: 243 AHLVVIDILAVGLALRRGPEFRKKMQNAQKSLQKFDMQFDSFFR 286 AHLVVIDILAVGLALR PE RKKM NAQK+LQKFD+QFDSF + Sbjct: 241 AHLVVIDILAVGLALRLSPERRKKMLNAQKALQKFDLQFDSFLQ 284