BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0918.p (496 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01767345.1| ABC transporter, carbohydrate uptake transpor... 626 e-177 ref|ZP_04889303.1| ABC transporter, carbohydrate uptake transpor... 626 e-177 ref|ZP_04521811.1| ribose import ATP-binding protein RbsA 2 [Bur... 626 e-177 ref|ZP_02484276.1| ribose ABC transport system, ATP-binding prot... 625 e-177 ref|ZP_03454780.1| ABC transporter, carbohydrate uptake transpor... 625 e-177 >ref|ZP_01767345.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 305] gb|EBA47741.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 305] Length = 505 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 337/496 (67%), Positives = 393/496 (79%), Gaps = 1/496 (0%) Query: 2 ETAMAELLLEAHGVSKSFHEVVALADGRLQLKRGSVHALCGGNGAGKSTFLAIIMGLLRR 61 +T + +LLEA V+K F+ V AL DGRL L G VHALCGGNG GKSTFL I+MGLLRR Sbjct: 10 DTIVTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRR 69 Query: 62 DGGEIRLKGQPVDFHSPAEALQHHIAIITQELSPIPGMSVAENLYLGREPRVAGLCVNTR 121 D G IRL G+ VDF SPAEAL +AIITQELSP+PGM+VAENLYLGREP AG+ V+ R Sbjct: 70 DEGTIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFR 129 Query: 122 AMERQAQALLDRLQFQVDARARMQDLSLAQVQLVEIAKAFSHDCDVMIMDEPTSAIGEKE 181 A++R+AQALLDRL F +DA A M LSLAQ QLVEIAKAFSHDC VMIMDEPTSAIGE+E Sbjct: 130 ALKRRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSAIGERE 189 Query: 182 TEVLFRAIRSVAAQGTGIIYVSHRLSEIFQIADSYTVFRDGRFVETGLIGDIDRASLVKA 241 TE LF AIR+V A G GIIYVSHRLSE+F IAD YTVFRDG +VE+G + DIDRA LV+A Sbjct: 190 TETLFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRA 249 Query: 242 IVGRTLQVQERRRRQG-GEAILSTEALGRQGEFDQVSLQVHAGEVVGIYGLMGSGRSEYL 300 IVGR + V ++ RR GE L E L R EF+ VSL V GE++GIYGLMGSGRSE+L Sbjct: 250 IVGREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFL 309 Query: 301 NCIYGLTRPDQGAVTLRQRPLPAGRPAASIAAGLSLVTEDRKDSGLVLCASIQDNIVLAA 360 NC+YGLTRPD GA TL +PLP G PA SI AG++LVTEDRKDSGLVLC S+Q+NI +AA Sbjct: 310 NCVYGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAA 369 Query: 361 YRRMSRLPLIRRSRVDTLVRQMIQRLQIKVSSPHLPVSSMSGGNQQKVVLARCLSTQPRC 420 YRR+SR +IRRS V L + M++RL+IK +S +PVS+MSGGNQQKVVLA+CLST+P Sbjct: 370 YRRLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVL 429 Query: 421 LLCDEPTRGIDEGAKREVYQLIDRFVQDGGAALVVSSEAQEILDLCDRIAIFKRGRVVEV 480 LLCDEPTRGIDEGAK+E+Y+L+D F +DGGA +VVSSEA E+L L DRIA+FK GRV V Sbjct: 430 LLCDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAAV 489 Query: 481 VDAHATTQEELLHLAS 496 TQE LLHLAS Sbjct: 490 RPGDGATQESLLHLAS 505 >ref|ZP_04889303.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 1655] gb|EDU10287.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 1655] Length = 493 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 337/493 (68%), Positives = 391/493 (79%), Gaps = 1/493 (0%) Query: 5 MAELLLEAHGVSKSFHEVVALADGRLQLKRGSVHALCGGNGAGKSTFLAIIMGLLRRDGG 64 M +LLEA V+K F+ V AL DGRL L G VHALCGGNG GKSTFL I+MGLLRRD G Sbjct: 1 MTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEG 60 Query: 65 EIRLKGQPVDFHSPAEALQHHIAIITQELSPIPGMSVAENLYLGREPRVAGLCVNTRAME 124 IRL G+ VDF SPAEAL +AIITQELSP+PGM+VAENLYLGREP AG+ V+ RA++ Sbjct: 61 TIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFRALK 120 Query: 125 RQAQALLDRLQFQVDARARMQDLSLAQVQLVEIAKAFSHDCDVMIMDEPTSAIGEKETEV 184 R+AQALLDRL F +DA A M LSLAQ QLVEIAKAFSHDC VMIMDEPTSAIGE+ETE Sbjct: 121 RRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSAIGERETET 180 Query: 185 LFRAIRSVAAQGTGIIYVSHRLSEIFQIADSYTVFRDGRFVETGLIGDIDRASLVKAIVG 244 LF AIR+V A G GIIYVSHRLSE+F IAD YTVFRDG +VE+G + DIDRA LV+AIVG Sbjct: 181 LFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRAIVG 240 Query: 245 RTLQVQERRRRQG-GEAILSTEALGRQGEFDQVSLQVHAGEVVGIYGLMGSGRSEYLNCI 303 R + V ++ RR GE L E L R EF+ VSL V GE++GIYGLMGSGRSE+LNC+ Sbjct: 241 REMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFLNCV 300 Query: 304 YGLTRPDQGAVTLRQRPLPAGRPAASIAAGLSLVTEDRKDSGLVLCASIQDNIVLAAYRR 363 YGLTRPD GA TL +PLP G PA SI AG++LVTEDRKDSGLVLC S+Q+NI +AAYRR Sbjct: 301 YGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAAYRR 360 Query: 364 MSRLPLIRRSRVDTLVRQMIQRLQIKVSSPHLPVSSMSGGNQQKVVLARCLSTQPRCLLC 423 +SR +IRRS V L + M++RL+IK +S +PVS+MSGGNQQKVVLA+CLST+P LLC Sbjct: 361 LSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVLLLC 420 Query: 424 DEPTRGIDEGAKREVYQLIDRFVQDGGAALVVSSEAQEILDLCDRIAIFKRGRVVEVVDA 483 DEPTRGIDEGAK+E+Y+L+D F +DGGA +VVSSEA E+L L DRIA+FK GRV V Sbjct: 421 DEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAAVRPG 480 Query: 484 HATTQEELLHLAS 496 TQE LLHLAS Sbjct: 481 DGATQESLLHLAS 493 >ref|ZP_04521811.1| ribose import ATP-binding protein RbsA 2 [Burkholderia pseudomallei MSHR346] gb|EEP50725.1| ribose import ATP-binding protein RbsA 2 [Burkholderia pseudomallei MSHR346] Length = 505 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 337/496 (67%), Positives = 393/496 (79%), Gaps = 1/496 (0%) Query: 2 ETAMAELLLEAHGVSKSFHEVVALADGRLQLKRGSVHALCGGNGAGKSTFLAIIMGLLRR 61 +T + +LLEA V+K F+ V AL DGRL L G VHALCGGNG GKSTFL I+MGLLRR Sbjct: 10 DTTVTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRR 69 Query: 62 DGGEIRLKGQPVDFHSPAEALQHHIAIITQELSPIPGMSVAENLYLGREPRVAGLCVNTR 121 D G IRL G+ VDF SPAEAL +AIITQELSP+PGM+VAENLYLGREP AG+ V+ R Sbjct: 70 DEGTIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFR 129 Query: 122 AMERQAQALLDRLQFQVDARARMQDLSLAQVQLVEIAKAFSHDCDVMIMDEPTSAIGEKE 181 A++R+AQALLDRL F +DA A M LSLAQ QLVEIAKAFSHDC VMIMDEPTSAIGE+E Sbjct: 130 ALKRRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSAIGERE 189 Query: 182 TEVLFRAIRSVAAQGTGIIYVSHRLSEIFQIADSYTVFRDGRFVETGLIGDIDRASLVKA 241 TE LF AIR+V A G GIIYVSHRLSE+F IAD YTVFRDG +VE+G + DIDRA LV+A Sbjct: 190 TETLFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRA 249 Query: 242 IVGRTLQVQERRRRQG-GEAILSTEALGRQGEFDQVSLQVHAGEVVGIYGLMGSGRSEYL 300 IVGR + V ++ RR GE L E L R EF+ VSL V GE++GIYGLMGSGRSE+L Sbjct: 250 IVGREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFL 309 Query: 301 NCIYGLTRPDQGAVTLRQRPLPAGRPAASIAAGLSLVTEDRKDSGLVLCASIQDNIVLAA 360 NC+YGLTRPD GA TL +PLP G PA SI AG++LVTEDRKDSGLVLC S+Q+NI +AA Sbjct: 310 NCVYGLTRPDAGAATLGGKPLPRGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAA 369 Query: 361 YRRMSRLPLIRRSRVDTLVRQMIQRLQIKVSSPHLPVSSMSGGNQQKVVLARCLSTQPRC 420 YRR+SR +IRRS V L + M++RL+IK +S +PVS+MSGGNQQKVVLA+CLST+P Sbjct: 370 YRRLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVL 429 Query: 421 LLCDEPTRGIDEGAKREVYQLIDRFVQDGGAALVVSSEAQEILDLCDRIAIFKRGRVVEV 480 LLCDEPTRGIDEGAK+E+Y+L+D F +DGGA +VVSSEA E+L L DRIA+FK GRV V Sbjct: 430 LLCDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAAV 489 Query: 481 VDAHATTQEELLHLAS 496 TQE LLHLAS Sbjct: 490 RPGDGATQESLLHLAS 505 >ref|ZP_02484276.1| ribose ABC transport system, ATP-binding protein [Burkholderia pseudomallei 7894] Length = 493 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 336/493 (68%), Positives = 391/493 (79%), Gaps = 1/493 (0%) Query: 5 MAELLLEAHGVSKSFHEVVALADGRLQLKRGSVHALCGGNGAGKSTFLAIIMGLLRRDGG 64 M +LLEA V+K F+ V AL DGRL L G VHALCGGNG GKSTFL I+MGLLRRD G Sbjct: 1 MTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRRDEG 60 Query: 65 EIRLKGQPVDFHSPAEALQHHIAIITQELSPIPGMSVAENLYLGREPRVAGLCVNTRAME 124 IRL G+ VDF SPAEAL +AIITQELSP+PGM+VAENLYLGREP AG+ V+ RA++ Sbjct: 61 TIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFRALK 120 Query: 125 RQAQALLDRLQFQVDARARMQDLSLAQVQLVEIAKAFSHDCDVMIMDEPTSAIGEKETEV 184 R+AQALLDRL F +DA A M LSLAQ QLVEIAKAFSHDC VMIMDEPTSAIGE+ETE Sbjct: 121 RRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSAIGERETET 180 Query: 185 LFRAIRSVAAQGTGIIYVSHRLSEIFQIADSYTVFRDGRFVETGLIGDIDRASLVKAIVG 244 LF A+R+V A G GIIYVSHRLSE+F IAD YTVFRDG +VE+G + DIDRA LV+AIVG Sbjct: 181 LFAAVRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRAIVG 240 Query: 245 RTLQVQERRRRQG-GEAILSTEALGRQGEFDQVSLQVHAGEVVGIYGLMGSGRSEYLNCI 303 R + V ++ RR GE L E L R EF+ VSL V GE++GIYGLMGSGRSE+LNC+ Sbjct: 241 REMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFLNCV 300 Query: 304 YGLTRPDQGAVTLRQRPLPAGRPAASIAAGLSLVTEDRKDSGLVLCASIQDNIVLAAYRR 363 YGLTRPD GA TL +PLP G PA SI AG++LVTEDRKDSGLVLC S+Q+NI +AAYRR Sbjct: 301 YGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAAYRR 360 Query: 364 MSRLPLIRRSRVDTLVRQMIQRLQIKVSSPHLPVSSMSGGNQQKVVLARCLSTQPRCLLC 423 +SR +IRRS V L + M++RL+IK +S +PVS+MSGGNQQKVVLA+CLST+P LLC Sbjct: 361 LSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVLLLC 420 Query: 424 DEPTRGIDEGAKREVYQLIDRFVQDGGAALVVSSEAQEILDLCDRIAIFKRGRVVEVVDA 483 DEPTRGIDEGAK+E+Y+L+D F +DGGA +VVSSEA E+L L DRIA+FK GRV V Sbjct: 421 DEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEAPELLYLSDRIAVFKGGRVAAVRPG 480 Query: 484 HATTQEELLHLAS 496 TQE LLHLAS Sbjct: 481 DGATQESLLHLAS 493 >ref|ZP_03454780.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 576] gb|EEC34206.1| ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, ATP-binding protein [Burkholderia pseudomallei 576] Length = 505 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 337/496 (67%), Positives = 393/496 (79%), Gaps = 1/496 (0%) Query: 2 ETAMAELLLEAHGVSKSFHEVVALADGRLQLKRGSVHALCGGNGAGKSTFLAIIMGLLRR 61 +T + +LLEA V+K F+ V AL DGRL L G VHALCGGNG GKSTFL I+MGLLRR Sbjct: 10 DTTVTPVLLEASQVAKRFNGVSALRDGRLSLAAGRVHALCGGNGTGKSTFLNILMGLLRR 69 Query: 62 DGGEIRLKGQPVDFHSPAEALQHHIAIITQELSPIPGMSVAENLYLGREPRVAGLCVNTR 121 D G IRL G+ VDF SPAEAL +AIITQELSP+PGM+VAENLYLGREP AG+ V+ R Sbjct: 70 DEGTIRLNGRDVDFASPAEALASRMAIITQELSPVPGMTVAENLYLGREPTRAGVVVDFR 129 Query: 122 AMERQAQALLDRLQFQVDARARMQDLSLAQVQLVEIAKAFSHDCDVMIMDEPTSAIGEKE 181 A++R+AQALLDRL F +DA A M LSLAQ QLVEIAKAFSHDC VMIMDEPTSAIGE+E Sbjct: 130 ALKRRAQALLDRLGFAIDAGAPMHRLSLAQTQLVEIAKAFSHDCQVMIMDEPTSAIGERE 189 Query: 182 TEVLFRAIRSVAAQGTGIIYVSHRLSEIFQIADSYTVFRDGRFVETGLIGDIDRASLVKA 241 TE LF AIR+V A G GIIYVSHRLSE+F IAD YTVFRDG +VE+G + DIDRA LV+A Sbjct: 190 TETLFAAIRNVTAHGAGIIYVSHRLSELFDIADDYTVFRDGAYVESGRLADIDRAHLVRA 249 Query: 242 IVGRTLQVQERRRRQG-GEAILSTEALGRQGEFDQVSLQVHAGEVVGIYGLMGSGRSEYL 300 IVGR + V ++ RR GE L E L R EF+ VSL V GE++GIYGLMGSGRSE+L Sbjct: 250 IVGREMPVVDKARRPAHGEPCLKVEGLTRANEFEDVSLDVRRGEILGIYGLMGSGRSEFL 309 Query: 301 NCIYGLTRPDQGAVTLRQRPLPAGRPAASIAAGLSLVTEDRKDSGLVLCASIQDNIVLAA 360 NC+YGLTRPD GA TL +PLP G PA SI AG++LVTEDRKDSGLVLC S+Q+NI +AA Sbjct: 310 NCVYGLTRPDAGAATLGGKPLPHGEPARSIRAGIALVTEDRKDSGLVLCGSVQENIAMAA 369 Query: 361 YRRMSRLPLIRRSRVDTLVRQMIQRLQIKVSSPHLPVSSMSGGNQQKVVLARCLSTQPRC 420 YRR+SR +IRRS V L + M++RL+IK +S +PVS+MSGGNQQKVVLA+CLST+P Sbjct: 370 YRRLSRGGVIRRSLVRRLAQAMVERLRIKAASLRMPVSAMSGGNQQKVVLAKCLSTEPVL 429 Query: 421 LLCDEPTRGIDEGAKREVYQLIDRFVQDGGAALVVSSEAQEILDLCDRIAIFKRGRVVEV 480 LLCDEPTRGIDEGAK+E+Y+L+D F +DGGA +VVSSEA E+L L DRIA+FK GRV V Sbjct: 430 LLCDEPTRGIDEGAKQEIYRLLDAFARDGGAVIVVSSEALELLYLSDRIAVFKGGRVAAV 489 Query: 481 VDAHATTQEELLHLAS 496 TQE LLHLAS Sbjct: 490 RPGDGATQESLLHLAS 505