BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0910.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774520.1| methyl-accepting chemotaxis transducer trans... 223 8e-57 ref|ZP_08780707.1| methyl-accepting chemotaxis sensory transduce... 148 3e-34 ref|YP_522181.1| methyl-accepting chemotaxis sensory transducer ... 145 3e-33 ref|NP_642763.1| chemotaxis protein [Xanthomonas axonopodis pv. ... 144 7e-33 ref|ZP_06704618.1| chemotaxis protein [Xanthomonas fuscans subsp... 143 7e-33 >ref|YP_003774520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62612.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 517 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 152/168 (90%), Positives = 156/168 (92%) Query: 1 MVDAIQQIAGKIVVIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSA 60 MV AIQQIAGKI VIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSA Sbjct: 350 MVAAIQQIAGKIAVIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSA 409 Query: 61 AQEIDEVARSNVALACAAERQLNDMVPTIARTSALVQEIVHSSESQSAAVSQISQAASQL 120 AQEIDEVAR+NV LACAAERQL+DMVPTI RTS LVQ+IV SSE QS AVSQIS AASQL Sbjct: 410 AQEIDEVARANVTLACAAERQLSDMVPTITRTSVLVQDIVQSSEQQSTAVSQISTAASQL 469 Query: 121 AQVIQQNSLSSEELAVTSEELNRRAVLLQTTVSFFQCQLARGMQPRLA 168 AQVIQQNSLSSEELAVTSEELNRRA+LLQT V FFQCQLARGMQ RLA Sbjct: 470 AQVIQQNSLSSEELAVTSEELNRRALLLQTAVGFFQCQLARGMQARLA 517 >ref|ZP_08780707.1| methyl-accepting chemotaxis sensory transducer [Methylobacter tundripaludum SV96] gb|EGW22882.1| methyl-accepting chemotaxis sensory transducer [Methylobacter tundripaludum SV96] Length = 626 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 99/154 (64%), Positives = 121/154 (78%) Query: 2 VDAIQQIAGKIVVIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSAA 61 V A++ IAGKI +IDDIAYQTNLLALNA IEAA AGEHG GFAVVAAEVR+LAERSQ AA Sbjct: 434 VSAMKSIAGKIGIIDDIAYQTNLLALNAAIEAARAGEHGRGFAVVAAEVRKLAERSQIAA 493 Query: 62 QEIDEVARSNVALACAAERQLNDMVPTIARTSALVQEIVHSSESQSAAVSQISQAASQLA 121 QEI E+A S+V +A +A + L+ +VP+I +TS LVQEI +SE QSA V QI+ A QL Sbjct: 494 QEIGELAESSVDMAESAGKLLDTIVPSIKKTSDLVQEIAAASEEQSAGVGQINTAMDQLN 553 Query: 122 QVIQQNSLSSEELAVTSEELNRRAVLLQTTVSFF 155 Q+ QQN+ SSEELA TSEE++ +A LQ ++FF Sbjct: 554 QITQQNASSSEELAATSEEMSGQAAQLQELIAFF 587 >ref|YP_522181.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD68650.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 550 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 102/157 (64%), Positives = 122/157 (77%) Query: 2 VDAIQQIAGKIVVIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSAA 61 V A++QIA KI +IDDIAYQTNLLALNA IEAA AGEHG GFAVVAAEVR+LAERSQ AA Sbjct: 343 VAAMKQIAKKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQIAA 402 Query: 62 QEIDEVARSNVALACAAERQLNDMVPTIARTSALVQEIVHSSESQSAAVSQISQAASQLA 121 QEI EVA S+V LA A + L+++VP I +TS LVQEI +SE QS+ QI+ A SQL Sbjct: 403 QEIGEVASSSVELAEKAGKLLDEIVPRIKKTSDLVQEITAASEEQSSGAGQINSAISQLN 462 Query: 122 QVIQQNSLSSEELAVTSEELNRRAVLLQTTVSFFQCQ 158 Q QQN+ SSEELA TSEE++ +A LQ T+SFF+ + Sbjct: 463 QTTQQNASSSEELAATSEEMSSQAEQLQQTMSFFKME 499 >ref|NP_642763.1| chemotaxis protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37299.1| chemotaxis protein [Xanthomonas axonopodis pv. citri str. 306] Length = 552 Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 100/153 (65%), Positives = 122/153 (79%) Query: 4 AIQQIAGKIVVIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSAAQE 63 A++QIA KI +IDDIAYQTNLLALNA IEAA AGEHG GFAVVAAEVR+LAERSQ AAQE Sbjct: 348 AMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQE 407 Query: 64 IDEVARSNVALACAAERQLNDMVPTIARTSALVQEIVHSSESQSAAVSQISQAASQLAQV 123 I EVA S+V LA A R L+ +VP+I RTS LVQEI +SE QS+ VSQI+ A QL+Q Sbjct: 408 IGEVASSSVELADRAGRLLDSIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQT 467 Query: 124 IQQNSLSSEELAVTSEELNRRAVLLQTTVSFFQ 156 QQN+ +SEELA T+EE++ +A LQ +++FF+ Sbjct: 468 TQQNASASEELAATAEEMSAQAEQLQQSMAFFR 500 >ref|ZP_06704618.1| chemotaxis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] ref|ZP_06731716.1| chemotaxis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF43805.1| chemotaxis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gb|EFF47187.1| chemotaxis protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 552 Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats. Identities = 100/153 (65%), Positives = 122/153 (79%) Query: 4 AIQQIAGKIVVIDDIAYQTNLLALNATIEAAHAGEHGSGFAVVAAEVRRLAERSQSAAQE 63 A++QIA KI +IDDIAYQTNLLALNA IEAA AGEHG GFAVVAAEVR+LAERSQ AAQE Sbjct: 348 AMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQE 407 Query: 64 IDEVARSNVALACAAERQLNDMVPTIARTSALVQEIVHSSESQSAAVSQISQAASQLAQV 123 I EVA S+V LA A R L+ +VP+I RTS LVQEI +SE QS+ VSQI+ A QL+Q Sbjct: 408 IGEVASSSVELADRAGRLLDSIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQT 467 Query: 124 IQQNSLSSEELAVTSEELNRRAVLLQTTVSFFQ 156 QQN+ +SEELA T+EE++ +A LQ +++FF+ Sbjct: 468 TQQNASASEELAATAEEMSAQAEQLQQSMAFFR 500