BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0908.p (195 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774519.1| L-idonate 5-dehydrogenase [Herbaspirillum se... 350 8e-95 ref|ZP_00944847.1| L-idonate 5-dehydrogenase [Ralstonia solanace... 271 4e-71 ref|YP_003748191.1| sorbitol dehydrogenase [Ralstonia solanacear... 271 4e-71 emb|CBJ40605.1| putative sorbitol dehydrogenase [Ralstonia solan... 257 6e-67 ref|NP_522509.1| putative L-idonate 5-dehydrogenase oxidoreducta... 256 1e-66 >ref|YP_003774519.1| L-idonate 5-dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62611.1| L-idonate 5-dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 345 Score = 350 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 189/195 (96%), Positives = 192/195 (98%) Query: 1 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA 60 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA Sbjct: 151 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA 210 Query: 61 LQVGADRAINMAETPDALKAYAVDKGTFDVLFEASGNERALVGALEALRPQAVIVQVGLG 120 LQVGAD AINMAETP ALKAYA DKGTFDVLFEASGNERALVGALEALRPQA+IVQVGLG Sbjct: 211 LQVGADSAINMAETPAALKAYAADKGTFDVLFEASGNERALVGALEALRPQAIIVQVGLG 270 Query: 121 GDIQFPANLLVGKELDWRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI 180 GDIQFPANLLVGKEL+WRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI Sbjct: 271 GDIQFPANLLVGKELEWRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI 330 Query: 181 AGDRSQMMKVQISFD 195 AGDRS+MMKVQISFD Sbjct: 331 AGDRSRMMKVQISFD 345 >ref|ZP_00944847.1| L-idonate 5-dehydrogenase [Ralstonia solanacearum UW551] ref|YP_002257655.1| l-idonate 5-dehydrogenase protein [Ralstonia solanacearum IPO1609] gb|EAP72606.1| L-idonate 5-dehydrogenase [Ralstonia solanacearum UW551] emb|CAQ59541.1| l-idonate 5-dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 344 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 137/194 (70%), Positives = 161/194 (82%) Query: 1 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA 60 MAEPLSVALHAVRRAGPL+GKRVLVTGCGPIGAL++VAARRAGA E++VTD+ + PL+AA Sbjct: 150 MAEPLSVALHAVRRAGPLLGKRVLVTGCGPIGALIIVAARRAGAAEIIVTDMGAYPLRAA 209 Query: 61 LQVGADRAINMAETPDALKAYAVDKGTFDVLFEASGNERALVGALEALRPQAVIVQVGLG 120 +VGAD IN+AE PD LK Y DKG DVLFEASGNERAL GA++ALRP+ +IVQ+GLG Sbjct: 210 RKVGADVTINVAEQPDGLKPYTTDKGRIDVLFEASGNERALRGAIDALRPRGIIVQIGLG 269 Query: 121 GDIQFPANLLVGKELDWRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI 180 GD+ P N +V KEL+ RGAFRFHEEFAMAVEL+N+ LVDVKPLI+AT P A F + Sbjct: 270 GDMSLPINAIVAKELELRGAFRFHEEFAMAVELLNKGLVDVKPLISATVPYRNAAHGFAL 329 Query: 181 AGDRSQMMKVQISF 194 AGDR+Q MKV + F Sbjct: 330 AGDRTQAMKVLLDF 343 >ref|YP_003748191.1| sorbitol dehydrogenase [Ralstonia solanacearum CFBP2957] emb|CBJ53799.1| putative sorbitol dehydrogenase [Ralstonia solanacearum CFBP2957] Length = 344 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 137/194 (70%), Positives = 161/194 (82%) Query: 1 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA 60 MAEPLSVALHAVRRAGPL+GKRVLVTGCGPIGAL++VAARRAGA E++VTD+ + PL+AA Sbjct: 150 MAEPLSVALHAVRRAGPLLGKRVLVTGCGPIGALIIVAARRAGAAEIIVTDMGAYPLRAA 209 Query: 61 LQVGADRAINMAETPDALKAYAVDKGTFDVLFEASGNERALVGALEALRPQAVIVQVGLG 120 +VGAD IN+AE PD LK Y DKG DVLFEASGNERAL GA++ALRP+ +IVQ+GLG Sbjct: 210 RKVGADVTINVAEQPDGLKPYTTDKGRIDVLFEASGNERALRGAIDALRPRGIIVQIGLG 269 Query: 121 GDIQFPANLLVGKELDWRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI 180 GD+ P N +V KEL+ RGAFRFHEEFAMAVEL+N+ LVDVKPLI+AT P A F + Sbjct: 270 GDMSLPINAIVAKELELRGAFRFHEEFAMAVELLNKGLVDVKPLISATVPYRNAAHGFAL 329 Query: 181 AGDRSQMMKVQISF 194 AGDR+Q MKV + F Sbjct: 330 AGDRTQAMKVLLDF 343 >emb|CBJ40605.1| putative sorbitol dehydrogenase [Ralstonia solanacearum CMR15] Length = 344 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 139/194 (71%), Positives = 162/194 (83%) Query: 1 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA 60 MAEPLSVALHAVRRAGPL+GKRVLVTGCGPIGAL+VVAARRAGA E++VTD+ + PL+AA Sbjct: 150 MAEPLSVALHAVRRAGPLLGKRVLVTGCGPIGALIVVAARRAGAAEIIVTDMGAYPLKAA 209 Query: 61 LQVGADRAINMAETPDALKAYAVDKGTFDVLFEASGNERALVGALEALRPQAVIVQVGLG 120 + VGAD IN+AE PD LK Y DKG DVLFEASGNERAL GA++ALRP+ +IVQVGLG Sbjct: 210 VSVGADVTINVAEQPDGLKPYTTDKGQIDVLFEASGNERALRGAIDALRPRGIIVQVGLG 269 Query: 121 GDIQFPANLLVGKELDWRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI 180 G++ P N +V KEL+ RGAFRFHEEFAMAVEL+N+ LVDVKPLI+AT P A AF + Sbjct: 270 GEMTLPLNAIVAKELELRGAFRFHEEFAMAVELLNKGLVDVKPLISATVPYRNAAHAFAL 329 Query: 181 AGDRSQMMKVQISF 194 AGDR+Q MKV + F Sbjct: 330 AGDRTQAMKVLLDF 343 >ref|NP_522509.1| putative L-idonate 5-dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] emb|CAD18099.1| putative l-idonate 5-dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 344 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 139/194 (71%), Positives = 162/194 (83%) Query: 1 MAEPLSVALHAVRRAGPLVGKRVLVTGCGPIGALVVVAARRAGALEVVVTDVASMPLQAA 60 MAEPLSVALHAVRRAGPL+GKRVLVTGCGPIGAL+VVAARRAGA E++VTD+ + PL+AA Sbjct: 150 MAEPLSVALHAVRRAGPLLGKRVLVTGCGPIGALIVVAARRAGAAEIIVTDMGAYPLKAA 209 Query: 61 LQVGADRAINMAETPDALKAYAVDKGTFDVLFEASGNERALVGALEALRPQAVIVQVGLG 120 + VGAD IN+AE PD LK Y DKG DVLFEASGNERAL GA++ALRP+ +IVQVGLG Sbjct: 210 VAVGADVTINVAEQPDGLKPYTTDKGQIDVLFEASGNERALRGAIDALRPRGIIVQVGLG 269 Query: 121 GDIQFPANLLVGKELDWRGAFRFHEEFAMAVELMNRKLVDVKPLITATYPIAQAVEAFEI 180 G++ P N +V KEL+ RGAFRFHEEFAMAVEL+N+ LVDVKPLI+AT P A AF + Sbjct: 270 GEMTLPLNAIVAKELELRGAFRFHEEFAMAVELLNKGLVDVKPLISATVPYRNAAHAFAL 329 Query: 181 AGDRSQMMKVQISF 194 AGDR+Q MKV + F Sbjct: 330 AGDRTQAMKVLLDF 343