BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0906.p (264 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774518.1| gluconate 5-dehydrogenase oxidoreductase [He... 484 e-135 ref|YP_003748192.1| gluconate 5-dehydrogenase (5-keto-D-gluconat... 347 8e-94 ref|YP_550330.1| short-chain dehydrogenase/reductase SDR [Polaro... 347 1e-93 ref|ZP_00944906.1| Gluconate 5-dehydrogenase [Ralstonia solanace... 345 3e-93 ref|YP_003749614.1| gluconate 5-dehydrogenase (5-keto-d-gluconat... 344 8e-93 >ref|YP_003774518.1| gluconate 5-dehydrogenase oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ62610.1| gluconate 5-dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 264 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 250/264 (94%), Positives = 259/264 (98%) Query: 1 MTIKTTPLPAGLQGFSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLATVA 60 MT KTTPLPAGLQGFSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLA VA Sbjct: 1 MTTKTTPLPAGLQGFSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLAAVA 60 Query: 61 AQLRAEGHTIHEASFDATVNDDVKAAVQKIENEIGAIGILVNNAGIQRRNPLEEFKESDW 120 AQLRAEGHTIHE+SFDAT +++VKAAVQKIE+EIG IGILVNNAGIQRRNPLEEFKESDW Sbjct: 61 AQLRAEGHTIHESSFDATSSEEVKAAVQKIESEIGPIGILVNNAGIQRRNPLEEFKESDW 120 Query: 121 HDLVNTNLNSVFYAAQAVARHMIPRGAGKIINICSVQSELGRPNIAPYTATKGAVKMFTK 180 HDL++TNLNSVF+AAQAVARHMIPRGAGKIINICSVQSELGRP IAPYTATKGAVKMFTK Sbjct: 121 HDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQSELGRPGIAPYTATKGAVKMFTK 180 Query: 181 GMAIDWGKYGLQVNGLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVF 240 GMAIDWGKYG+QVNGLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVF Sbjct: 181 GMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVF 240 Query: 241 LASDASRFVNGHILYVDGGVTATL 264 LASDASRFVNGHILYVDGGVTATL Sbjct: 241 LASDASRFVNGHILYVDGGVTATL 264 >ref|YP_003748192.1| gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum CFBP2957] emb|CBJ53800.1| Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum CFBP2957] Length = 266 Score = 347 bits (891), Expect = 8e-94, Method: Composition-based stats. Identities = 180/259 (69%), Positives = 207/259 (79%) Query: 6 TPLPAGLQGFSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLATVAAQLRA 65 T P L F L G+ ALITG+S GIGLALA G+A+AGA +VLN R KLA A LRA Sbjct: 8 TMTPPNLNMFDLTGRTALITGASSGIGLALAGGLARAGARVVLNARGQEKLARAADSLRA 67 Query: 66 EGHTIHEASFDATVNDDVKAAVQKIENEIGAIGILVNNAGIQRRNPLEEFKESDWHDLVN 125 +G +H A+FD T + V + +IE E+G I ILVNNAG+QRR PLE+F+ + WH+L+ Sbjct: 68 QGADVHTAAFDVTDSATVTDGIARIEAELGPIDILVNNAGMQRRAPLEQFETAQWHELMK 127 Query: 126 TNLNSVFYAAQAVARHMIPRGAGKIINICSVQSELGRPNIAPYTATKGAVKMFTKGMAID 185 TN++SVF QAVAR MIPR GKIINICSVQSELGRP IAPYTA+KGAVKM TKGMAID Sbjct: 128 TNVDSVFLVGQAVARCMIPRRRGKIINICSVQSELGRPGIAPYTASKGAVKMLTKGMAID 187 Query: 186 WGKYGLQVNGLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVFLASDA 245 WG+YG+QVNGLGPGYFKTE+ ALV++ +FT WLVGRTPSRRWGDVEDLVGAAVFLAS A Sbjct: 188 WGQYGIQVNGLGPGYFKTELTQALVDNPEFTAWLVGRTPSRRWGDVEDLVGAAVFLASQA 247 Query: 246 SRFVNGHILYVDGGVTATL 264 S FVNGHILYVDGGVTATL Sbjct: 248 SDFVNGHILYVDGGVTATL 266 >ref|YP_550330.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] gb|ABE45432.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 272 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 175/250 (70%), Positives = 203/250 (81%) Query: 15 FSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLATVAAQLRAEGHTIHEAS 74 F L+G+LALITGSS GIG ALAR + QAGA +VLNGRDAG+L A LR+EG +H Sbjct: 23 FRLDGRLALITGSSAGIGFALARALGQAGATLVLNGRDAGRLEQAAGVLRSEGLQVHTRM 82 Query: 75 FDATVNDDVKAAVQKIENEIGAIGILVNNAGIQRRNPLEEFKESDWHDLVNTNLNSVFYA 134 FD T + V+AAVQ IE+ +GAI ILVNNAG+QRR PL EF WH+L+ TN++SVF+ Sbjct: 83 FDVTQAEAVEAAVQDIESTLGAIEILVNNAGMQRRMPLHEFSTEQWHELMRTNVDSVFFM 142 Query: 135 AQAVARHMIPRGAGKIINICSVQSELGRPNIAPYTATKGAVKMFTKGMAIDWGKYGLQVN 194 +AVAR MI R G+IIN+CSVQSELGRPNIAPYTA+KGAVKM TKGMAIDWG +G+ VN Sbjct: 143 GRAVARKMIERRRGRIINVCSVQSELGRPNIAPYTASKGAVKMLTKGMAIDWGPHGINVN 202 Query: 195 GLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHIL 254 GLGPGYF+TE+N LV D +F WL+GRTPSRRWG+VEDL GAAVFLASDAS FVNGHIL Sbjct: 203 GLGPGYFRTELNEKLVADEQFNAWLIGRTPSRRWGNVEDLGGAAVFLASDASSFVNGHIL 262 Query: 255 YVDGGVTATL 264 YVDGGVTATL Sbjct: 263 YVDGGVTATL 272 >ref|ZP_00944906.1| Gluconate 5-dehydrogenase [Ralstonia solanacearum UW551] gb|EAP72553.1| Gluconate 5-dehydrogenase [Ralstonia solanacearum UW551] Length = 277 Score = 345 bits (886), Expect = 3e-93, Method: Composition-based stats. Identities = 180/259 (69%), Positives = 206/259 (79%) Query: 6 TPLPAGLQGFSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLATVAAQLRA 65 T P L F L G+ ALITG+S GIGLALA G+A+AGA +VLN R KLA A LRA Sbjct: 19 TMTPPNLNMFDLTGRTALITGASSGIGLALAGGLARAGARVVLNARGQEKLARAADSLRA 78 Query: 66 EGHTIHEASFDATVNDDVKAAVQKIENEIGAIGILVNNAGIQRRNPLEEFKESDWHDLVN 125 +G +H A+FD T + V + +IE +G I ILVNNAG+QRR PLE+F+ + WH L+ Sbjct: 79 QGADVHTAAFDVTDSAAVTDGIARIEAGLGPIDILVNNAGMQRRAPLEQFETAQWHALMK 138 Query: 126 TNLNSVFYAAQAVARHMIPRGAGKIINICSVQSELGRPNIAPYTATKGAVKMFTKGMAID 185 TN++SVF QAVAR MIPRG GKIINICSVQSELGRP IAPYTA+KGAVKM TKGMAID Sbjct: 139 TNVDSVFLVGQAVARCMIPRGRGKIINICSVQSELGRPGIAPYTASKGAVKMLTKGMAID 198 Query: 186 WGKYGLQVNGLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVFLASDA 245 WG+YG+QVNGLGPGYFKTE+ ALV++ +FT WLVGRTPSRRWGDVEDLVGAAVFLAS A Sbjct: 199 WGQYGIQVNGLGPGYFKTELTQALVDNPEFTAWLVGRTPSRRWGDVEDLVGAAVFLASQA 258 Query: 246 SRFVNGHILYVDGGVTATL 264 S FVNGHILYVDGGVTATL Sbjct: 259 SDFVNGHILYVDGGVTATL 277 >ref|YP_003749614.1| gluconate 5-dehydrogenase (5-keto-d-gluconate 5-reductase) [Ralstonia solanacearum PSI07] emb|CBJ34975.1| Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum PSI07] Length = 258 Score = 344 bits (882), Expect = 8e-93, Method: Composition-based stats. Identities = 178/256 (69%), Positives = 207/256 (80%) Query: 9 PAGLQGFSLEGKLALITGSSGGIGLALARGMAQAGAAIVLNGRDAGKLATVAAQLRAEGH 68 P L F L G+ ALITG+S GIGLALA G+A+AGA +VLN R KLA A LRA+G Sbjct: 3 PPNLNLFDLSGRTALITGASSGIGLALAGGLARAGARVVLNARGQEKLAQAADSLRAQGA 62 Query: 69 TIHEASFDATVNDDVKAAVQKIENEIGAIGILVNNAGIQRRNPLEEFKESDWHDLVNTNL 128 +H A+FD T + V + ++E E+G I ILVNNAG+QRR PLE+F+ + WH+L+ TN+ Sbjct: 63 DVHTAAFDVTQSAAVTDGIARVEAELGPIDILVNNAGMQRRAPLEQFETAQWHELMKTNV 122 Query: 129 NSVFYAAQAVARHMIPRGAGKIINICSVQSELGRPNIAPYTATKGAVKMFTKGMAIDWGK 188 +SVF QAVAR+MIPRG GKIINICSVQSELGRP IAPYTA+KGAVKM TKGMAIDWG Sbjct: 123 DSVFLVGQAVARYMIPRGRGKIINICSVQSELGRPGIAPYTASKGAVKMLTKGMAIDWGP 182 Query: 189 YGLQVNGLGPGYFKTEMNMALVNDAKFTDWLVGRTPSRRWGDVEDLVGAAVFLASDASRF 248 +G+QVNGLGPGYFKTE+ ALV +A+FT WLVGRTPSRRWGDVEDLVGAA+FLAS AS F Sbjct: 183 HGIQVNGLGPGYFKTELTQALVANAEFTAWLVGRTPSRRWGDVEDLVGAAIFLASKASDF 242 Query: 249 VNGHILYVDGGVTATL 264 VNGHILYVDGGVTATL Sbjct: 243 VNGHILYVDGGVTATL 258