BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0904.p (450 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774516.1| high-affinity gluconate permease [Herbaspiri... 687 0.0 ref|YP_608030.1| gluconate permease [Pseudomonas entomophila L48... 557 e-156 ref|YP_002947971.1| gluconate transporter [Variovorax paradoxus ... 557 e-156 ref|NP_251012.1| gluconate permease [Pseudomonas aeruginosa PAO1... 554 e-155 ref|YP_004157170.1| gluconate transporter [Variovorax paradoxus ... 553 e-155 >ref|YP_003774516.1| high-affinity gluconate permease [Herbaspirillum seropedicae SmR1] gb|ADJ62608.1| high-affinity gluconate permease protein [Herbaspirillum seropedicae SmR1] Length = 450 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 440/450 (97%), Positives = 444/450 (98%) Query: 1 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSGFLGLISGMPLPKIVKSFQD 60 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSG LGLISGMPLPKIVKSFQD Sbjct: 1 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSGLLGLISGMPLPKIVKSFQD 60 Query: 61 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQISQTLVRAFGRERVHWAMMMGAFLVGIPL 120 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQI+QTLVRAFGRERVHWAMMMGAFLVGIPL Sbjct: 61 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQIAQTLVRAFGRERVHWAMMMGAFLVGIPL 120 Query: 121 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG 180 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG Sbjct: 121 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG 180 Query: 181 KTIFYGLLVGLPTVIIAGPLFGAFISRYVDIKPSEELMAQLAREPQTTNLPGFTTTLVTV 240 KTIFYGLLVGLPTVIIAGP+FGAFISRYVDIKPSEELMAQL REPQTT LPGF TTL+TV Sbjct: 181 KTIFYGLLVGLPTVIIAGPMFGAFISRYVDIKPSEELMAQLVREPQTTKLPGFATTLITV 240 Query: 241 LLPVFLMLLKTFVDVTLPEGHAVRDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL 300 L PVFLMLLKT VDVTLPEGHA+RDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL Sbjct: 241 LAPVFLMLLKTLVDVTLPEGHAMRDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL 300 Query: 301 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV 360 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV Sbjct: 301 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV 360 Query: 361 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS 420 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS Sbjct: 361 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS 420 Query: 421 VGETFKTWTVMETLISVVAIIFIMLLNLVV 450 VGETFKTWTVMETLISVVAIIFIMLLNLVV Sbjct: 421 VGETFKTWTVMETLISVVAIIFIMLLNLVV 450 >ref|YP_608030.1| gluconate permease [Pseudomonas entomophila L48] emb|CAK15227.1| putative gluconate permease (GntP family) [Pseudomonas entomophila L48] Length = 450 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 341/450 (75%), Positives = 395/450 (87%) Query: 1 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSGFLGLISGMPLPKIVKSFQD 60 M G++ D LL +A++ I+ LIL+IT ++HPF+ALT+ +GFLGL SGMP+ K++KSFQD Sbjct: 1 MFGLATDTYLLLDAMVTIVGLILLITHFKVHPFVALTLAAGFLGLTSGMPVAKVMKSFQD 60 Query: 61 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQISQTLVRAFGRERVHWAMMMGAFLVGIPL 120 GFGGVLGFVGIVL LGTMLGKLMA+SGGADQI+QTL+RAFG+++VHWAMM AFLVGIPL Sbjct: 61 GFGGVLGFVGIVLALGTMLGKLMADSGGADQIAQTLIRAFGKQKVHWAMMFAAFLVGIPL 120 Query: 121 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG 180 FFEIGFVLLIPLVFIVARRSGV L KIG+P+LA LSV+HGLVPPHPGPLLAIGIF ADIG Sbjct: 121 FFEIGFVLLIPLVFIVARRSGVSLVKIGIPLLAGLSVVHGLVPPHPGPLLAIGIFHADIG 180 Query: 181 KTIFYGLLVGLPTVIIAGPLFGAFISRYVDIKPSEELMAQLAREPQTTNLPGFTTTLVTV 240 KTIFYGLLV LPT +IAGPLFG FISRY+ PS+ELM Q+ARE NLP F+ TL+TV Sbjct: 181 KTIFYGLLVALPTAVIAGPLFGNFISRYIPGNPSQELMDQIARESNQNNLPSFSVTLLTV 240 Query: 241 LLPVFLMLLKTFVDVTLPEGHAVRDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL 300 LLPV LMLLKTF DV LP H VR MD IG+PI ALLAALLLA +TFG ARGF RQQ++ Sbjct: 241 LLPVALMLLKTFADVVLPAEHIVRQWMDLIGHPITALLAALLLAFYTFGSARGFNRQQIM 300 Query: 301 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV 360 K +DQSLAPTAAIVLI+GAGGGFKQMLV++GVG IGQ+AV A+ISP+LLAW VA VIR+ Sbjct: 301 KMLDQSLAPTAAIVLIVGAGGGFKQMLVDTGVGNVIGQMAVQAEISPILLAWLVAAVIRI 360 Query: 361 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS 420 ATGSATVATITGAGIVAP++ L+PG N+ELLVLATGAGSLILSHVNDAGFWLVK+YFNM+ Sbjct: 361 ATGSATVATITGAGIVAPVIDLVPGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMT 420 Query: 421 VGETFKTWTVMETLISVVAIIFIMLLNLVV 450 V ETFKTW++MET++SVV IIFIMLL++VV Sbjct: 421 VAETFKTWSMMETILSVVGIIFIMLLSMVV 450 >ref|YP_002947971.1| gluconate transporter [Variovorax paradoxus S110] gb|ACS22705.1| gluconate transporter [Variovorax paradoxus S110] Length = 450 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 346/450 (76%), Positives = 399/450 (88%) Query: 1 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSGFLGLISGMPLPKIVKSFQD 60 M GMS + LL +A++AIL LI +ITR R+HPFIALT+ +GFLGL SGMP+ ++KSFQ+ Sbjct: 1 MFGMSKEVFLLVDALVAILGLIFLITRWRVHPFIALTLAAGFLGLTSGMPVDLVMKSFQE 60 Query: 61 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQISQTLVRAFGRERVHWAMMMGAFLVGIPL 120 GFGGVLGFVGIVLGLGTMLGK+MAESGGAD+I++TL+ AFGRERVHWAMM AFLVGIPL Sbjct: 61 GFGGVLGFVGIVLGLGTMLGKMMAESGGADRIARTLIDAFGRERVHWAMMFAAFLVGIPL 120 Query: 121 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG 180 FFEIGFVLLIPLVFIVARR+GV L +IG+P+LA LSV+HGLVPPHPGPLLAIG+FGADIG Sbjct: 121 FFEIGFVLLIPLVFIVARRTGVSLIRIGIPLLAGLSVVHGLVPPHPGPLLAIGVFGADIG 180 Query: 181 KTIFYGLLVGLPTVIIAGPLFGAFISRYVDIKPSEELMAQLAREPQTTNLPGFTTTLVTV 240 KTIFYGL+VGLPT +IAGP+FG FIS+YV + S ELM QLA EP+ LPGF TL+TV Sbjct: 181 KTIFYGLIVGLPTAMIAGPIFGKFISKYVPGEASPELMEQLAHEPEARELPGFGITLLTV 240 Query: 241 LLPVFLMLLKTFVDVTLPEGHAVRDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL 300 LLPV LMLLKTF DV L + + +R MDFIG+PI ALLAALLL+++TFG ARGFT +Q++ Sbjct: 241 LLPVGLMLLKTFADVALDDKNVMRHWMDFIGHPITALLAALLLSLYTFGTARGFTAKQIM 300 Query: 301 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV 360 KFVD SLAPTAAIVLIIGAGGGFKQMLV SGVG AIGQ+A+HAQ+SP+LLAW VAG+IR+ Sbjct: 301 KFVDDSLAPTAAIVLIIGAGGGFKQMLVASGVGNAIGQMALHAQVSPILLAWLVAGLIRI 360 Query: 361 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS 420 ATGSATVATITGAGIVAPL ++PG N+ELLVLATGAGSLILSHVNDAGFWLVK+YFNM+ Sbjct: 361 ATGSATVATITGAGIVAPLATMVPGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMT 420 Query: 421 VGETFKTWTVMETLISVVAIIFIMLLNLVV 450 V ETFKTWTVMETLISVVAI+FIMLL +VV Sbjct: 421 VAETFKTWTVMETLISVVAIVFIMLLGMVV 450 >ref|NP_251012.1| gluconate permease [Pseudomonas aeruginosa PAO1] ref|ZP_01365685.1| hypothetical protein PaerPA_01002811 [Pseudomonas aeruginosa PACS2] ref|YP_790918.1| gluconate permease [Pseudomonas aeruginosa UCBPP-PA14] ref|YP_002440572.1| gluconate permease [Pseudomonas aeruginosa LESB58] ref|ZP_04934083.1| gluconate permease [Pseudomonas aeruginosa 2192] ref|ZP_06878743.1| gluconate permease [Pseudomonas aeruginosa PAb1] sp|Q9ZIJ1|GNUT_PSEAE RecName: Full=Gluconate permease gb|AAG05710.1|AE004658_4 gluconate permease [Pseudomonas aeruginosa PAO1] gb|AAD01803.1| gluconate permease [Pseudomonas aeruginosa PAO1] gb|ABJ11501.1| gluconate permease [Pseudomonas aeruginosa UCBPP-PA14] gb|EAZ58202.1| gluconate permease [Pseudomonas aeruginosa 2192] emb|CAW27710.1| gluconate permease [Pseudomonas aeruginosa LESB58] gb|EGM12853.1| gluconate permease [Pseudomonas aeruginosa 138244] gb|EGM14575.1| gluconate permease [Pseudomonas aeruginosa 152504] dbj|GAA17902.1| gluconate permease [Pseudomonas aeruginosa NCMG1179] gb|AEO75202.1| gluconate permease [Pseudomonas aeruginosa M18] Length = 450 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 337/450 (74%), Positives = 393/450 (87%) Query: 1 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSGFLGLISGMPLPKIVKSFQD 60 M GMSHDA LL +A++ I+ LI++ITR ++HPFIAL I +GFLGL SGMP+ KIVKSFQD Sbjct: 1 MFGMSHDAYLLLDALVTIIGLIVLITRFKVHPFIALIIAAGFLGLTSGMPVEKIVKSFQD 60 Query: 61 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQISQTLVRAFGRERVHWAMMMGAFLVGIPL 120 GFGGVLGFVG++L LGTMLGKLMA+SGGADQI++TL+RAFG+ERVHW+MM+ AFLVGIPL Sbjct: 61 GFGGVLGFVGVILALGTMLGKLMADSGGADQIARTLIRAFGKERVHWSMMLAAFLVGIPL 120 Query: 121 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG 180 FFEIGF+LLIPLVFIVARRSGV L KIG+P+LA LS +HGLVPPHPGPLLAIG+FGADIG Sbjct: 121 FFEIGFILLIPLVFIVARRSGVSLIKIGIPLLAGLSAVHGLVPPHPGPLLAIGVFGADIG 180 Query: 181 KTIFYGLLVGLPTVIIAGPLFGAFISRYVDIKPSEELMAQLAREPQTTNLPGFTTTLVTV 240 KTI YGL+V LPT IAGPLFGA +SRY+ PS EL+ Q+A EP+T +LP F TL TV Sbjct: 181 KTILYGLIVALPTAAIAGPLFGALVSRYIPGTPSAELVEQIAHEPETQDLPSFGVTLATV 240 Query: 241 LLPVFLMLLKTFVDVTLPEGHAVRDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL 300 LLPVFLMLLKTF DV P+GHA R MD IG+PI ALL ALL+A++TFG ARGF +++L Sbjct: 241 LLPVFLMLLKTFADVAFPDGHAFRAWMDMIGHPISALLLALLVALYTFGYARGFDSKKIL 300 Query: 301 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV 360 + +DQSLAPTAAIV+IIGAGGGFKQMLV SGVG IG LAV+AQISP+LLAW VA VIR+ Sbjct: 301 RLLDQSLAPTAAIVMIIGAGGGFKQMLVASGVGDVIGHLAVNAQISPILLAWLVAAVIRI 360 Query: 361 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS 420 ATGSATVATITGAGIV P++ LIPG N+ELLVLATGAGSLILSHVNDAGFWLVK+YFNMS Sbjct: 361 ATGSATVATITGAGIVVPVIDLIPGVNRELLVLATGAGSLILSHVNDAGFWLVKQYFNMS 420 Query: 421 VGETFKTWTVMETLISVVAIIFIMLLNLVV 450 V ETFKTWT MET++SVV ++FI+LL+LV+ Sbjct: 421 VSETFKTWTAMETILSVVGLVFILLLSLVL 450 >ref|YP_004157170.1| gluconate transporter [Variovorax paradoxus EPS] gb|ADU39059.1| gluconate transporter [Variovorax paradoxus EPS] Length = 450 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 344/450 (76%), Positives = 398/450 (88%) Query: 1 MLGMSHDATLLFNAVIAILALILMITRLRIHPFIALTITSGFLGLISGMPLPKIVKSFQD 60 M GMS + LL +A++AIL LIL+ITR R+HPFIALT+ +GFLGL SGMP+ ++KSFQ+ Sbjct: 1 MFGMSKEVFLLVDALVAILGLILLITRWRVHPFIALTLAAGFLGLTSGMPVDLVMKSFQE 60 Query: 61 GFGGVLGFVGIVLGLGTMLGKLMAESGGADQISQTLVRAFGRERVHWAMMMGAFLVGIPL 120 GFGGVLGFVGIVLGLGTMLGK+MAESGGAD+I++TL+ AFG+ERVHWAMM AFLVGIPL Sbjct: 61 GFGGVLGFVGIVLGLGTMLGKMMAESGGADRIARTLIDAFGKERVHWAMMSAAFLVGIPL 120 Query: 121 FFEIGFVLLIPLVFIVARRSGVPLFKIGMPMLASLSVMHGLVPPHPGPLLAIGIFGADIG 180 FFEIGFVLLIPLVFIVARR+GV L +IG+P+LA LSV+HGLVPPHPGPLLAIG+FGADIG Sbjct: 121 FFEIGFVLLIPLVFIVARRTGVSLIRIGIPLLAGLSVVHGLVPPHPGPLLAIGVFGADIG 180 Query: 181 KTIFYGLLVGLPTVIIAGPLFGAFISRYVDIKPSEELMAQLAREPQTTNLPGFTTTLVTV 240 KTIFYGLLVGLPT +IAGP+FG +IS+YV + S ELM QLAREP+ LPGF TLVT+ Sbjct: 181 KTIFYGLLVGLPTAMIAGPIFGKYISKYVPGEASPELMEQLAREPEARELPGFGITLVTI 240 Query: 241 LLPVFLMLLKTFVDVTLPEGHAVRDLMDFIGNPIVALLAALLLAIWTFGIARGFTRQQVL 300 LLPV LMLLKTF DV L + + VR +DFIG+PI ALLAALLL+++TFG ARGFT +Q++ Sbjct: 241 LLPVALMLLKTFADVALDDKNVVRQWLDFIGHPITALLAALLLSLYTFGFARGFTSKQIM 300 Query: 301 KFVDQSLAPTAAIVLIIGAGGGFKQMLVNSGVGTAIGQLAVHAQISPLLLAWFVAGVIRV 360 KFVD SLAPTAAIVLIIGAGGGFKQMLV SGVG AIG +A++AQ+SP+LLAW VAG+IR+ Sbjct: 301 KFVDDSLAPTAAIVLIIGAGGGFKQMLVTSGVGNAIGHMALNAQVSPILLAWLVAGLIRI 360 Query: 361 ATGSATVATITGAGIVAPLVALIPGTNKELLVLATGAGSLILSHVNDAGFWLVKEYFNMS 420 ATGSATVATITGAGIVAPL L+PG N ELLVLATGAGSLILSHVNDAGFWLVK+YFNM+ Sbjct: 361 ATGSATVATITGAGIVAPLATLVPGVNLELLVLATGAGSLILSHVNDAGFWLVKQYFNMT 420 Query: 421 VGETFKTWTVMETLISVVAIIFIMLLNLVV 450 V ETFKTWTVMETLISVVA+ FIMLL++ V Sbjct: 421 VAETFKTWTVMETLISVVALAFIMLLSMFV 450