BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0894.p (426 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774507.1| 4-aminobutyrate aminotransferase [Herbaspiri... 805 0.0 ref|YP_002005440.1| 4-aminobutyrate aminotransferase, plp-depend... 642 0.0 ref|YP_776595.1| 4-aminobutyrate aminotransferase [Burkholderia ... 640 0.0 ref|YP_371040.1| 4-aminobutyrate aminotransferase [Burkholderia ... 637 e-180 ref|ZP_02889096.1| 4-aminobutyrate aminotransferase [Burkholderi... 635 e-180 >ref|YP_003774507.1| 4-aminobutyrate aminotransferase [Herbaspirillum seropedicae SmR1] gb|ADJ62599.1| 4-aminobutyrate aminotransferase protein [Herbaspirillum seropedicae SmR1] Length = 426 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 408/426 (95%), Positives = 421/426 (98%) Query: 1 MTSKATNQELQQRKNAATPRGVGVMCDFYAERASNAELWDVEGRRFIDFAAGIAVLNTGH 60 MTSKA NQELQQRKNAATPRGVGVMCDFYAERA+NAELWDVEGRRFIDFAAGIAVLNTGH Sbjct: 1 MTSKANNQELQQRKNAATPRGVGVMCDFYAERAANAELWDVEGRRFIDFAAGIAVLNTGH 60 Query: 61 RHPKLLDAMRAQLDKFTHTAYQIVPYASYVELAERINAVTPGNYPKKTAFFSTGAEAVEN 120 RHPKLLDAMRAQ+DKFTHTAYQIVPYASYVELAERIN +TPGNYPKKTAFFSTGAEAVEN Sbjct: 61 RHPKLLDAMRAQMDKFTHTAYQIVPYASYVELAERINRLTPGNYPKKTAFFSTGAEAVEN 120 Query: 121 AIKIARAHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHG 180 AIKIARAHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHG Sbjct: 121 AIKIARAHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHG 180 Query: 181 ITTEDALDAVHGLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRAICDEHGILLI 240 IT+EDAL+AV GLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRA+CDEHGILLI Sbjct: 181 ITSEDALEAVKGLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRALCDEHGILLI 240 Query: 241 ADEVQSGYGRTGKLFAMEHYDVLPDMMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGT 300 ADEVQSGYGRTGKLFAMEHYDVLPD+MTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGT Sbjct: 241 ADEVQSGYGRTGKLFAMEHYDVLPDLMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGT 300 Query: 301 YAGNPLAVASALAVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAV 360 YAGNPLA+ASALAVLDVMEEE+LV RGQRLGDKLQEHLKELRS+VPQIAEVRGVGAMVAV Sbjct: 301 YAGNPLAIASALAVLDVMEEEQLVTRGQRLGDKLQEHLKELRSSVPQIAEVRGVGAMVAV 360 Query: 361 EFADPVTGKPDADYTKKVQQHALNNGLLLLSCGSYGNVIRFLFPLTIPDTVMDEALGILA 420 EFADP TGKPDA+YTKKVQQHALNNGLLLL+CGSYGNVIRFLFPLTIPDTVMDEALGILA Sbjct: 361 EFADPATGKPDAEYTKKVQQHALNNGLLLLTCGSYGNVIRFLFPLTIPDTVMDEALGILA 420 Query: 421 KAIKLA 426 KAI+LA Sbjct: 421 KAIRLA 426 >ref|YP_002005440.1| 4-aminobutyrate aminotransferase, plp-dependent [Cupriavidus taiwanensis LMG 19424] emb|CAQ69373.1| 4-aminobutyrate aminotransferase, PLP-dependent [Cupriavidus taiwanensis LMG 19424] Length = 420 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 322/417 (77%), Positives = 363/417 (87%), Gaps = 1/417 (0%) Query: 7 NQELQQRKNAATPRGVGVMCDFYAERASNAELWDVEGRRFIDFAAGIAVLNTGHRHPKLL 66 N EL +RK+AATPRGVGVMC+FYAERA N+E+WDVEG+R+IDFAAGIAVLNTGHRHP+L+ Sbjct: 3 NAELVRRKDAATPRGVGVMCNFYAERALNSEIWDVEGKRYIDFAAGIAVLNTGHRHPRLV 62 Query: 67 DAMRAQLDKFTHTAYQIVPYASYVELAERINAVTPGNYPKKTAFFSTGAEAVENAIKIAR 126 +A+ QL +FTHTAYQIVPYASY+ELAE+IN PG KKTAFF+TGAEAVENAIKIAR Sbjct: 63 EAVEKQLGRFTHTAYQIVPYASYIELAEKINRRAPGRSAKKTAFFTTGAEAVENAIKIAR 122 Query: 127 AHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHGITTEDA 186 A TGRPGVIAF+GGFHGRTMMGMALTGKVAPYK+GFGPFPG+V+HAPYP ALHG++T+D+ Sbjct: 123 AATGRPGVIAFSGGFHGRTMMGMALTGKVAPYKIGFGPFPGEVYHAPYPCALHGVSTDDS 182 Query: 187 LDAVHGLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQS 246 L A+ LFK+DI+ KRVAAII EPVQGEGGF AP DF+R LRA+CDEHGILLIADEVQ+ Sbjct: 183 LKALQHLFKADIDPKRVAAIIFEPVQGEGGFNVAPTDFVRALRAVCDEHGILLIADEVQT 242 Query: 247 GYGRTGKLFAMEHYDVLPDMMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGTYAGNPL 306 G+GRTGKLFAMEHYDV PD+ TMAKSLAGGMPLSAV GRAE+MDAPAPGGLGGTYAGNPL Sbjct: 243 GFGRTGKLFAMEHYDVAPDLTTMAKSLAGGMPLSAVCGRAEVMDAPAPGGLGGTYAGNPL 302 Query: 307 AVASALAVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPV 366 AVASALAVLDV+E EKL+ RG LG +L L+ LR VPQIAEVRGVGAMVAVEF Sbjct: 303 AVASALAVLDVLESEKLIDRGAELGQRLMTRLESLRPRVPQIAEVRGVGAMVAVEFRQ-A 361 Query: 367 TGKPDADYTKKVQQHALNNGLLLLSCGSYGNVIRFLFPLTIPDTVMDEALGILAKAI 423 G PD D+T+ VQ AL GLLLLSCG YGNVIRFLFPLTI D VM+E L ILA+A+ Sbjct: 362 DGSPDPDFTRTVQNRALEKGLLLLSCGVYGNVIRFLFPLTIQDAVMNEGLDILAEAL 418 >ref|YP_776595.1| 4-aminobutyrate aminotransferase [Burkholderia ambifaria AMMD] gb|ABI90261.1| 4-aminobutyrate aminotransferase apoenzyme [Burkholderia ambifaria AMMD] Length = 446 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 319/418 (76%), Positives = 363/418 (86%) Query: 7 NQELQQRKNAATPRGVGVMCDFYAERASNAELWDVEGRRFIDFAAGIAVLNTGHRHPKLL 66 N +LQ RKNAATPRGVGVMCDFYA RA NAELWDVEGRRFIDFAAGIAVLNTGHRHPK++ Sbjct: 22 NADLQARKNAATPRGVGVMCDFYAARAENAELWDVEGRRFIDFAAGIAVLNTGHRHPKIV 81 Query: 67 DAMRAQLDKFTHTAYQIVPYASYVELAERINAVTPGNYPKKTAFFSTGAEAVENAIKIAR 126 A+ QL+ FTHTAYQIVPYASYVELAE+IN PG++PKKTAFF+TGAEAVENAIKIAR Sbjct: 82 KAITEQLNSFTHTAYQIVPYASYVELAEKINGRAPGDFPKKTAFFTTGAEAVENAIKIAR 141 Query: 127 AHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHGITTEDA 186 A TGRPGVIAF+GGFHGRTMMGMALTGKVAPYKL FGPFPGDVFHAPYP+ALHG++T D+ Sbjct: 142 AATGRPGVIAFSGGFHGRTMMGMALTGKVAPYKLNFGPFPGDVFHAPYPNALHGVSTADS 201 Query: 187 LDAVHGLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQS 246 + A+ LFK+DI+ KRVAAII EPVQGEGGFY APA+F+R LR IC+EHGILLIADEVQ+ Sbjct: 202 IKAIEMLFKADIDPKRVAAIIFEPVQGEGGFYPAPAEFVRALRKICNEHGILLIADEVQT 261 Query: 247 GYGRTGKLFAMEHYDVLPDMMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGTYAGNPL 306 G+ RTGKLFAM+HYDVL D++TMAKSLAGGMPLS V GRA++MDA APGGLGGTYAGNPL Sbjct: 262 GFARTGKLFAMQHYDVLADLITMAKSLAGGMPLSGVVGRADVMDAAAPGGLGGTYAGNPL 321 Query: 307 AVASALAVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPV 366 AVASA AVL++++EEKL R +LGD L+ L L++ VPQIA+VRG GAMVAVEF P Sbjct: 322 AVASAHAVLEIIDEEKLCERATQLGDVLKAKLNSLQADVPQIADVRGPGAMVAVEFLKPG 381 Query: 367 TGKPDADYTKKVQQHALNNGLLLLSCGSYGNVIRFLFPLTIPDTVMDEALGILAKAIK 424 +G+PDAD+TK+VQ AL GLLLL CG Y NV+RFLFPLTIP V DEAL IL + +K Sbjct: 382 SGEPDADFTKRVQARALERGLLLLVCGVYSNVVRFLFPLTIPQAVFDEALVILEEVLK 439 >ref|YP_371040.1| 4-aminobutyrate aminotransferase [Burkholderia sp. 383] gb|ABB10396.1| 4-aminobutyrate aminotransferase apoenzyme [Burkholderia sp. 383] Length = 429 Score = 637 bits (1643), Expect = e-180, Method: Composition-based stats. Identities = 318/418 (76%), Positives = 364/418 (87%) Query: 7 NQELQQRKNAATPRGVGVMCDFYAERASNAELWDVEGRRFIDFAAGIAVLNTGHRHPKLL 66 N +LQ RKNAATPRGVGVMCDFYA RA NAELWDVEGRRFIDFAAGIAVLNTGHRHPK++ Sbjct: 5 NADLQARKNAATPRGVGVMCDFYAARAENAELWDVEGRRFIDFAAGIAVLNTGHRHPKIV 64 Query: 67 DAMRAQLDKFTHTAYQIVPYASYVELAERINAVTPGNYPKKTAFFSTGAEAVENAIKIAR 126 A+ QL+ FTHTAYQIVPYASYVELAE+INA PG++PKKTAFF+TGAEAVENAIKIAR Sbjct: 65 KAISDQLNNFTHTAYQIVPYASYVELAEKINARAPGDFPKKTAFFTTGAEAVENAIKIAR 124 Query: 127 AHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHGITTEDA 186 A TGRPGVIAF+GGFHGRTMMGMALTGKVAPYKL FGPFPGDVFHAPYP+A+HG+TT D+ Sbjct: 125 AATGRPGVIAFSGGFHGRTMMGMALTGKVAPYKLNFGPFPGDVFHAPYPNAVHGVTTADS 184 Query: 187 LDAVHGLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQS 246 + A+ LFK+DI+ KRVAAII EPVQGEGGFYAAPA+F+R LR IC+EHGILLIADEVQ+ Sbjct: 185 IKAIEMLFKADIDPKRVAAIIFEPVQGEGGFYAAPAEFVRALRKICNEHGILLIADEVQT 244 Query: 247 GYGRTGKLFAMEHYDVLPDMMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGTYAGNPL 306 G+ RTGKLFAM+HYDVL D++TMAKSLAGGMPLS V GRA++MDA APGGLGGTYAGNPL Sbjct: 245 GFARTGKLFAMQHYDVLADLITMAKSLAGGMPLSGVVGRADVMDAAAPGGLGGTYAGNPL 304 Query: 307 AVASALAVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPV 366 AVASA AVL++++EEKL R + GD L+ L L++ VPQIA+VRG GAM+AVEF P Sbjct: 305 AVASAHAVLEIIDEEKLCERATQFGDVLKAKLNALQADVPQIADVRGPGAMIAVEFLKPG 364 Query: 367 TGKPDADYTKKVQQHALNNGLLLLSCGSYGNVIRFLFPLTIPDTVMDEALGILAKAIK 424 +G+PDA++TK+VQ AL GLLLL CG Y NV+RFLFPLTIP V DEAL IL + +K Sbjct: 365 SGEPDAEFTKRVQTRALERGLLLLVCGVYSNVVRFLFPLTIPQAVFDEALVILEEVLK 422 >ref|ZP_02889096.1| 4-aminobutyrate aminotransferase [Burkholderia ambifaria IOP40-10] gb|EDT05322.1| 4-aminobutyrate aminotransferase [Burkholderia ambifaria IOP40-10] Length = 427 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 317/418 (75%), Positives = 363/418 (86%) Query: 7 NQELQQRKNAATPRGVGVMCDFYAERASNAELWDVEGRRFIDFAAGIAVLNTGHRHPKLL 66 N +LQ RKNAATPRGVGVMCDFYA RA NAELWDVEGRRFIDFAAGIAVLNTGHRHPK++ Sbjct: 3 NADLQARKNAATPRGVGVMCDFYAARAENAELWDVEGRRFIDFAAGIAVLNTGHRHPKIV 62 Query: 67 DAMRAQLDKFTHTAYQIVPYASYVELAERINAVTPGNYPKKTAFFSTGAEAVENAIKIAR 126 A+ QL+ FTHTAYQIVPYASYVELAE+IN PG++PKKTAFF+TGAEAVENAIKIAR Sbjct: 63 KAIADQLNSFTHTAYQIVPYASYVELAEKINERAPGDFPKKTAFFTTGAEAVENAIKIAR 122 Query: 127 AHTGRPGVIAFAGGFHGRTMMGMALTGKVAPYKLGFGPFPGDVFHAPYPSALHGITTEDA 186 A TGRPGVIAF+GGFHGRTMMGMALTGKVAPYKL FGPFPGDVFHAPYP+ALHG+TT D+ Sbjct: 123 AATGRPGVIAFSGGFHGRTMMGMALTGKVAPYKLNFGPFPGDVFHAPYPNALHGVTTADS 182 Query: 187 LDAVHGLFKSDIEAKRVAAIILEPVQGEGGFYAAPADFMRGLRAICDEHGILLIADEVQS 246 + A+ LFK+DI+ KRVAAII EPVQGEGGFY APA+F+R LR IC+EHGILLIADEVQ+ Sbjct: 183 IKAIEMLFKADIDPKRVAAIIFEPVQGEGGFYPAPAEFVRALRKICNEHGILLIADEVQT 242 Query: 247 GYGRTGKLFAMEHYDVLPDMMTMAKSLAGGMPLSAVNGRAEIMDAPAPGGLGGTYAGNPL 306 G+ RTGKLFAM+HYDVL D++TMAKSLAGGMPLS V GRA++MDA APGGLGGTYAGNPL Sbjct: 243 GFARTGKLFAMQHYDVLADLITMAKSLAGGMPLSGVVGRADVMDAAAPGGLGGTYAGNPL 302 Query: 307 AVASALAVLDVMEEEKLVARGQRLGDKLQEHLKELRSAVPQIAEVRGVGAMVAVEFADPV 366 AVASA AVL++++EE+L R +LGD L+ L L++ VPQIA+VRG GAM+AVEF P Sbjct: 303 AVASAHAVLEIIDEEQLCERATQLGDVLKAKLNSLQADVPQIADVRGPGAMIAVEFLKPG 362 Query: 367 TGKPDADYTKKVQQHALNNGLLLLSCGSYGNVIRFLFPLTIPDTVMDEALGILAKAIK 424 +G+PDAD+TK+VQ AL GLLLL CG Y NV+RFLFPLT+P V DEAL IL + +K Sbjct: 363 SGEPDADFTKRVQARALERGLLLLVCGVYSNVVRFLFPLTVPQAVFDEALVILEEVLK 420