BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0893.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774506.1| spermidine/putrescine ABC transporter ATPase... 728 0.0 ref|YP_004755026.1| spermidine putrescine transport ATP-binding ... 558 e-157 ref|ZP_02366435.1| spermidine/putrescine ABC transporter, ATP-bi... 507 e-141 ref|ZP_02360720.1| spermidine/putrescine ABC transporter, ATP-bi... 505 e-141 ref|YP_001585390.1| spermidine/putrescine ABC transporter ATPase... 503 e-140 >ref|YP_003774506.1| spermidine/putrescine ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62598.1| ABC-type spermidine/putrescine transport systems, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 362/380 (95%), Positives = 366/380 (96%), Gaps = 4/380 (1%) Query: 1 MMAAYAMKQAAQAHAPATGSGNDVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGP 60 MMAAYAMKQAAQ + DVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGP Sbjct: 1 MMAAYAMKQAAQESVQQS----DVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGP 56 Query: 61 SGSGKTTCLMMLAGFEFPTGGEIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVA 120 SGSGKTTCLMMLAGFEFPTGGEIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVA Sbjct: 57 SGSGKTTCLMMLAGFEFPTGGEIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVA 116 Query: 121 YPLSVRKMDRATREAKVKQALDMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLM 180 YPLSVRKMDRATREAKVKQALDMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLM Sbjct: 117 YPLSVRKMDRATREAKVKQALDMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLM 176 Query: 181 DEPLGALDKQLREHMQLELKALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAP 240 DEPLGALDKQLREHMQLELKALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAP Sbjct: 177 DEPLGALDKQLREHMQLELKALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAP 236 Query: 241 VTELYEYPDNQFVANFIGDNNRLKGSVESVQGEHCTVRLADGTVVTGLNVHRAHAGQSIT 300 VTELYEYPDNQFVANFIGDNNR KGSVESVQGEHCTVRL DG +TGLNVHRAHAGQSIT Sbjct: 237 VTELYEYPDNQFVANFIGDNNRFKGSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSIT 296 Query: 301 ACVRPERIRLAAGGSAEPNSIRATIAGLIYFGDHVRVRCTVTGQEDCFVKLSLSDPALAG 360 ACVRPERIRLAAGGSAEPNSIRA+IAGLIYFGDHVRVRCTV GQEDCFVKLSLSDPAL+G Sbjct: 297 ACVRPERIRLAAGGSAEPNSIRASIAGLIYFGDHVRVRCTVAGQEDCFVKLSLSDPALSG 356 Query: 361 LSEGSSVVLHVAQDRLRCFL 380 LSEGSSVVLHVAQDRLRCFL Sbjct: 357 LSEGSSVVLHVAQDRLRCFL 376 >ref|YP_004755026.1| spermidine putrescine transport ATP-binding protein potA [Collimonas fungivorans Ter331] gb|AEK64203.1| Spermidine Putrescine transport ATP-binding protein potA [Collimonas fungivorans Ter331] Length = 393 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 269/358 (75%), Positives = 305/358 (85%) Query: 23 DVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE 82 D LVQF GVKKTYDGENL+VKNL+LDI+RGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE Sbjct: 36 DTLVQFSGVKKTYDGENLVVKNLNLDIQRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE 95 Query: 83 IRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALD 142 IRLDGQLLN+VPPHKRNIGMVFQNYALFPHMT+AQNVAYPL VR + + R KVK+ALD Sbjct: 96 IRLDGQLLNKVPPHKRNIGMVFQNYALFPHMTVAQNVAYPLRVRNIGGSERADKVKKALD 155 Query: 143 MVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKAL 202 MVQMGKFGDRYP QLSGGQQQR+ALAR LVFDP+LVLMDEPLGALDKQLREHMQLELKAL Sbjct: 156 MVQMGKFGDRYPAQLSGGQQQRIALARALVFDPKLVLMDEPLGALDKQLREHMQLELKAL 215 Query: 203 HKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNR 262 HKRLGVTFVYVTHDQSEALTMSDRVAVFDQG+IQQLA V LYEYP+NQFVA FIGDNNR Sbjct: 216 HKRLGVTFVYVTHDQSEALTMSDRVAVFDQGIIQQLAVVDRLYEYPENQFVAGFIGDNNR 275 Query: 263 LKGSVESVQGEHCTVRLADGTVVTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPNSIR 322 G + + +G + T+RL G +++GLN ++A G+ + AC+RPERI L A ++R Sbjct: 276 FNGVLAASEGGNGTLRLPHGGLLSGLNANQAEVGRQVVACIRPERIHLLPLADAPQQALR 335 Query: 323 ATIAGLIYFGDHVRVRCTVTGQEDCFVKLSLSDPALAGLSEGSSVVLHVAQDRLRCFL 380 +++ LIYFGDHVRVRC + Q+DCFVKLSL+DPALAGL EG+ V L + LR F+ Sbjct: 336 VSVSSLIYFGDHVRVRCAIPQQDDCFVKLSLNDPALAGLYEGTEVALDIDPKHLRIFI 393 >ref|ZP_02366435.1| spermidine/putrescine ABC transporter, ATP-binding protein [Burkholderia oklahomensis C6786] Length = 366 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 247/362 (68%), Positives = 288/362 (79%), Gaps = 4/362 (1%) Query: 22 NDVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGG 81 +DV+V F GV+KTYDGE L+VK+LDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGG Sbjct: 4 DDVIVSFRGVRKTYDGETLVVKSLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGG 63 Query: 82 EIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQAL 141 EIRLDG+LLN VPPHKRNIGMVFQNYALFPH+T+ QNV YPLSVR+M A R+ +V AL Sbjct: 64 EIRLDGELLNNVPPHKRNIGMVFQNYALFPHLTVEQNVDYPLSVRRMSAAERKDRVAAAL 123 Query: 142 DMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKA 201 MVQM +F RYP QLSGGQQQR+ALAR LVF+P+LVLMDEPLGALDKQLREHMQ ELKA Sbjct: 124 RMVQMERFAKRYPAQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYELKA 183 Query: 202 LHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNN 261 LH++LG+TFVYVTHDQ EALTMSDRVAVFD+G++QQL V LYE P N+FVANFIGD+N Sbjct: 184 LHEKLGLTFVYVTHDQGEALTMSDRVAVFDKGIVQQLDTVDRLYESPCNEFVANFIGDSN 243 Query: 262 RLKGSVESVQGEHCTVRLADGTVVTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPNSI 321 RL+G+V SV GE C RL DGT + GLN A AG + AC+RPER+ +A G N Sbjct: 244 RLRGTVASVNGEFCEFRLDDGTHLVGLNTGNAQAGATGIACIRPERMNVAPGNGHAANGT 303 Query: 322 RATIAG----LIYFGDHVRVRCTVTGQEDCFVKLSLSDPALAGLSEGSSVVLHVAQDRLR 377 ++G LIYFGDHVR+RC + GQ++CFVK+ L ALA + G+ + L + LR Sbjct: 304 ANALSGEARSLIYFGDHVRMRCALPGQDECFVKVPLGTGALAAFTPGAPISLEFRPEHLR 363 Query: 378 CF 379 F Sbjct: 364 VF 365 >ref|ZP_02360720.1| spermidine/putrescine ABC transporter, ATP-binding protein [Burkholderia oklahomensis EO147] Length = 366 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 244/362 (67%), Positives = 287/362 (79%), Gaps = 4/362 (1%) Query: 22 NDVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGG 81 +DV+V F GV+KTYDGE L+VK+LDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGG Sbjct: 4 DDVIVSFRGVRKTYDGETLVVKSLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGG 63 Query: 82 EIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQAL 141 EIRLDG+LLN VPPHKRNIGMVFQNYALFPH+T+ QN+ YPLSVR+M A R+ +V L Sbjct: 64 EIRLDGELLNNVPPHKRNIGMVFQNYALFPHLTVEQNIDYPLSVRRMSAAERKDRVAAVL 123 Query: 142 DMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKA 201 MVQM +F RYP QLSGGQQQR+ALAR LVF+P+LVLMDEPLGALDKQLREHMQ ELKA Sbjct: 124 RMVQMERFAKRYPAQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYELKA 183 Query: 202 LHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNN 261 LH++LG+TFVYVTHDQ EALTMSDRVAVFD+G++QQL V LYE P N+FVANFIGD+N Sbjct: 184 LHEKLGLTFVYVTHDQGEALTMSDRVAVFDKGIVQQLDTVDRLYESPCNEFVANFIGDSN 243 Query: 262 RLKGSVESVQGEHCTVRLADGTVVTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPNSI 321 RL+G++ SV GE C RL DGT + GLN A AG + AC+RPER+ +A G N Sbjct: 244 RLRGTIASVNGEFCEFRLDDGTHLVGLNTGNAQAGATGIACIRPERMNVAPGNGHAANGT 303 Query: 322 RATIAG----LIYFGDHVRVRCTVTGQEDCFVKLSLSDPALAGLSEGSSVVLHVAQDRLR 377 ++G LIYFGDHVR+RC + GQ++CFVK+ L ALA + G+ + L + LR Sbjct: 304 ANALSGEARSLIYFGDHVRMRCVLPGQDECFVKVPLGTGALAAFTPGAPISLEFRPEHLR 363 Query: 378 CF 379 F Sbjct: 364 VF 365 >ref|YP_001585390.1| spermidine/putrescine ABC transporter ATPase subunit [Burkholderia multivorans ATCC 17616] ref|YP_001941860.1| spermidine/putrescine transport system ATP-binding protein [Burkholderia multivorans ATCC 17616] ref|ZP_03584792.1| spermidine/putrescine import ATP-binding protein PotA [Burkholderia multivorans CGD1] gb|ABX19098.1| spermidine/putrescine ABC transporter ATPase subunit [Burkholderia multivorans ATCC 17616] dbj|BAG47870.1| spermidine/putrescine transport system ATP-binding protein [Burkholderia multivorans ATCC 17616] gb|EEE00368.1| spermidine/putrescine import ATP-binding protein PotA [Burkholderia multivorans CGD1] Length = 368 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 251/366 (68%), Positives = 285/366 (77%), Gaps = 8/366 (2%) Query: 21 GNDVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTG 80 +DV+V F GV+KTYDGE L+VK+LDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTG Sbjct: 3 ADDVIVSFRGVRKTYDGETLVVKSLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTG 62 Query: 81 GEIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQA 140 GEIRLDG+LLN VPPHKRNIGMVFQNYALFPH+T+ QNVAYPL+VRK+ A R +V A Sbjct: 63 GEIRLDGELLNHVPPHKRNIGMVFQNYALFPHLTVEQNVAYPLTVRKLPAAERAERVAHA 122 Query: 141 LDMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELK 200 L MVQM +F RYP QLSGGQQQR+ALAR LVF+P+LVLMDEPLGALDKQLREHMQ ELK Sbjct: 123 LKMVQMERFAKRYPAQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYELK 182 Query: 201 ALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDN 260 ALH++LGVTFVYVTHDQ EALTMSDRVAVFD+G++QQL V LYE P N+FVANFIGD+ Sbjct: 183 ALHEKLGVTFVYVTHDQGEALTMSDRVAVFDKGIVQQLDTVDRLYESPCNEFVANFIGDS 242 Query: 261 NRLKGSVESVQGEHCTVRLADGTVVTGLNVHRAHAGQSITACVRPERIRL-------AAG 313 NRL+G++ V GE C +RL DGT + G NV A G AC+RPER+RL AA Sbjct: 243 NRLRGTIARVDGEFCELRLGDGTRLIGRNVANAAPGAPAIACIRPERMRLCREPEPPAAH 302 Query: 314 GSAEPNSIRATIAGLIYFGDHVRVRCTVTGQEDCFVKLSLSDPALAGLSEGSSVVLHVAQ 373 G A N + GLIYFGDHVR+RC V GQ +CFVK+ L AL G+ V L A Sbjct: 303 GDA-ANRVAGEALGLIYFGDHVRMRCAVPGQGECFVKVPLGTEALDNFFPGAPVSLSFAP 361 Query: 374 DRLRCF 379 LR F Sbjct: 362 AHLRVF 367