BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0885.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004280615.1| pyridoxamine 5'-phosphate oxidase-related FM... 211 6e-53 ref|YP_004475209.1| Nitric oxide dioxygenase [Pseudomonas fulva ... 210 1e-52 ref|YP_001755987.1| oxidoreductase FAD/NAD(P)-binding subunit [M... 197 1e-48 ref|YP_004359849.1| pyridoxamine 5'-phosphate oxidase-related FM... 195 5e-48 ref|ZP_06839356.1| oxidoreductase FAD/NAD(P)-binding domain prot... 194 7e-48 >ref|YP_004280615.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Agrobacterium sp. H13-3] gb|ADY68237.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Agrobacterium sp. H13-3] Length = 686 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 104/175 (59%), Positives = 131/175 (74%), Gaps = 2/175 (1%) Query: 20 DFTLDTATDRPVVLLAGGVGITPMMAMLRHIVQEGLRRQRMRPAILFYAARTLGERAFDA 79 +F +D RP VLLAGGVGITP++AMLRH+V EG+R+QR+RP LF+AART ER FD Sbjct: 430 EFGVDARATRPAVLLAGGVGITPLLAMLRHVVYEGIRKQRIRPITLFHAARTKAERPFDK 489 Query: 80 ELAELVAASRGAVRLVRVLSDTTGAREGDAFDAAGRIDMNLLSRSLPFGDYEFYLCGPGG 139 E+AELVAA++G VRLVRVLSD A EG +D AGRIDM +L++ LPF DY+FYLCGP Sbjct: 490 EIAELVAAAKGVVRLVRVLSDIGDATEGSDYDTAGRIDMAMLTKHLPFNDYDFYLCGPPQ 549 Query: 140 FMQGLYDGLRGFGISDERIHAEAFGPASLTRTGNTRKADTYAREASRKPAGRRIP 194 F Q LYDGLRG+ I+D+RIHAEAFGP+SL R+ + + D A P+ + +P Sbjct: 550 FTQALYDGLRGYNIADDRIHAEAFGPSSLVRSVDAK--DARATPLRALPSDKPVP 602 >ref|YP_004475209.1| Nitric oxide dioxygenase [Pseudomonas fulva 12-X] gb|AEF23115.1| Nitric oxide dioxygenase [Pseudomonas fulva 12-X] Length = 688 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 107/150 (71%), Positives = 122/150 (81%) Query: 21 FTLDTATDRPVVLLAGGVGITPMMAMLRHIVQEGLRRQRMRPAILFYAARTLGERAFDAE 80 FTLD +RP+VLLAGG+GITPM+AMLRH+V EG RRQR+RP LFYAAR+ ERAFD E Sbjct: 431 FTLDAQEERPLVLLAGGIGITPMLAMLRHVVYEGWRRQRIRPVTLFYAARSKAERAFDRE 490 Query: 81 LAELVAASRGAVRLVRVLSDTTGAREGDAFDAAGRIDMNLLSRSLPFGDYEFYLCGPGGF 140 L +LVAA++GAVRLVRVLSDT+GA G +D AGRIDM LL+R L F DY FYLCGP F Sbjct: 491 LGDLVAAAQGAVRLVRVLSDTSGAEPGVDYDTAGRIDMALLTRYLAFDDYAFYLCGPPAF 550 Query: 141 MQGLYDGLRGFGISDERIHAEAFGPASLTR 170 QGLYDGLRG+ I+D RIHAE FGPASL R Sbjct: 551 TQGLYDGLRGYNIADGRIHAEGFGPASLVR 580 >ref|YP_001755987.1| oxidoreductase FAD/NAD(P)-binding subunit [Methylobacterium radiotolerans JCM 2831] gb|ACB25304.1| oxidoreductase FAD/NAD(P)-binding domain protein [Methylobacterium radiotolerans JCM 2831] Length = 687 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 102/157 (64%), Positives = 122/157 (77%) Query: 21 FTLDTATDRPVVLLAGGVGITPMMAMLRHIVQEGLRRQRMRPAILFYAARTLGERAFDAE 80 FTLD RP VLLAGGVGITP++AMLRH+V EGLR +R+RP L YAART ERAF+ E Sbjct: 434 FTLDAGAARPAVLLAGGVGITPLLAMLRHVVYEGLRTRRIRPTTLVYAARTRAERAFEGE 493 Query: 81 LAELVAASRGAVRLVRVLSDTTGAREGDAFDAAGRIDMNLLSRSLPFGDYEFYLCGPGGF 140 L+EL AA++GAVR+VRVLSD + AR G ++AAGRIDM LL+R L F DY+FYLCGP F Sbjct: 494 LSELAAAAQGAVRIVRVLSDVSDARPGTDYEAAGRIDMALLTRFLAFADYDFYLCGPPAF 553 Query: 141 MQGLYDGLRGFGISDERIHAEAFGPASLTRTGNTRKA 177 Q LYDGLRG+ ++D+RIHAEAFGP+ L R T A Sbjct: 554 TQALYDGLRGYNVADDRIHAEAFGPSGLVRNAGTAVA 590 >ref|YP_004359849.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Burkholderia gladioli BSR3] gb|AEA59893.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Burkholderia gladioli BSR3] Length = 690 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 95/148 (64%), Positives = 119/148 (80%) Query: 21 FTLDTATDRPVVLLAGGVGITPMMAMLRHIVQEGLRRQRMRPAILFYAARTLGERAFDAE 80 FT+D A RP VLLA GVG+TPM+AMLRHIV EGLR++R+RP F++AR+LGERAF AE Sbjct: 433 FTIDAAQTRPAVLLAAGVGVTPMLAMLRHIVYEGLRKRRVRPTWFFHSARSLGERAFSAE 492 Query: 81 LAELVAASRGAVRLVRVLSDTTGAREGDAFDAAGRIDMNLLSRSLPFGDYEFYLCGPGGF 140 +A+L AAS+GAV +VR LSDT GA+ + +D GR+D+ LL R+LPF DY+FYLCGPGGF Sbjct: 493 IAQLAAASKGAVTVVRALSDTVGAQAHEDYDFGGRLDIALLRRTLPFDDYDFYLCGPGGF 552 Query: 141 MQGLYDGLRGFGISDERIHAEAFGPASL 168 MQ +YD LR ++D RIHAEAFGP+ L Sbjct: 553 MQSMYDALRDLNVADARIHAEAFGPSGL 580 >ref|ZP_06839356.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp. Ch1-1] gb|EFG72897.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia sp. Ch1-1] Length = 691 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 98/168 (58%), Positives = 121/168 (72%) Query: 21 FTLDTATDRPVVLLAGGVGITPMMAMLRHIVQEGLRRQRMRPAILFYAARTLGERAFDAE 80 FT+D A RP VLLA GVG+TPM+AMLRH+V EGLR +R+RP LF++ARTL ERAF E Sbjct: 434 FTIDAAAHRPAVLLAAGVGVTPMLAMLRHVVYEGLRTRRVRPTWLFHSARTLAERAFTKE 493 Query: 81 LAELVAASRGAVRLVRVLSDTTGAREGDAFDAAGRIDMNLLSRSLPFGDYEFYLCGPGGF 140 + +L A + G VR+VR L+D+ GA+ G FDAAGR+D+ LL +LPF DY+FYLCGP GF Sbjct: 494 IDQLAANAGGEVRVVRTLTDSEGAQMGKDFDAAGRLDIELLRETLPFNDYDFYLCGPAGF 553 Query: 141 MQGLYDGLRGFGISDERIHAEAFGPASLTRTGNTRKADTYAREASRKP 188 MQ LYDGLR ++D RIHAEAFGPA L R + A + KP Sbjct: 554 MQSLYDGLRELNVADNRIHAEAFGPAGLHRRTDAGADAGLAHLPADKP 601