BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0875.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004444492.1| carbonyl reductase [Agrobacterium sp. H13-3]... 331 5e-89 gb|EGP55891.1| short chain dehydrogenase [Agrobacterium tumefaci... 330 1e-88 ref|NP_356329.2| short chain dehydrogenase [Agrobacterium tumefa... 326 1e-87 ref|YP_003774492.1| 2-deoxy-D-gluconate 3-dehydrogenase [Herbasp... 323 2e-86 ref|YP_915943.1| short chain dehydrogenase [Paracoccus denitrifi... 307 8e-82 >ref|YP_004444492.1| carbonyl reductase [Agrobacterium sp. H13-3] gb|ADY67401.1| carbonyl reductase [Agrobacterium sp. H13-3] Length = 241 Score = 331 bits (849), Expect = 5e-89, Method: Composition-based stats. Identities = 192/241 (79%), Positives = 216/241 (89%) Query: 1 MEFSGTSVIITGAGKGIGRACARLMAQRGAEVIALSRTASDLASLREEIGSRSVQVDLAD 60 M+FSG SVIITGAGKGIGRACA LMA RGAEV+A+SRT SDL SL+ EIG RS++VDLAD Sbjct: 1 MQFSGKSVIITGAGKGIGRACAILMAARGAEVVAISRTQSDLDSLKSEIGGRSIRVDLAD 60 Query: 61 PAAARRAMEQAGTADFLINSAGINVLQSSTEMTDAGYEAVLGVNLRAALITCQAFARARI 120 A+ R AM +AG DFLINSAGINVL+S +M+D GYEAVLG+NLRAAL+TCQ FARAR+ Sbjct: 61 VASTRAAMVEAGPCDFLINSAGINVLESVLDMSDEGYEAVLGINLRAALVTCQEFARARV 120 Query: 121 AAGGGGAIVNITSIAGHRGFAEHLCYAASKAGLEGATRVLAKELGAHGIRVNAVAPTITL 180 A GGGGAIVNITSIAGHRGF +HLCYAASKAGLEGATRVLAKELG HGIRVNAVAPTITL Sbjct: 121 AKGGGGAIVNITSIAGHRGFQDHLCYAASKAGLEGATRVLAKELGPHGIRVNAVAPTITL 180 Query: 181 TELAEAAWSDPAKSAPMMVRHPLQRFASAEDVARSIAMLLSADAAMLTGAVVPVDGGFLA 240 TELA AW+DPAKS PMMVRHPLQRFA AEDVA+SIA+LLS D++M++GAV+P+DGGFLA Sbjct: 181 TELAAEAWNDPAKSTPMMVRHPLQRFAEAEDVAQSIALLLSDDSSMISGAVLPIDGGFLA 240 Query: 241 V 241 V Sbjct: 241 V 241 >gb|EGP55891.1| short chain dehydrogenase [Agrobacterium tumefaciens F2] Length = 241 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 193/241 (80%), Positives = 217/241 (90%) Query: 1 MEFSGTSVIITGAGKGIGRACARLMAQRGAEVIALSRTASDLASLREEIGSRSVQVDLAD 60 M+FSG SVIITGAGKGIGRACA LMA RGA+V+A+SRT SDL SL+ EIG RS++VDLAD Sbjct: 1 MQFSGKSVIITGAGKGIGRACAILMAARGADVVAISRTQSDLDSLKSEIGGRSIRVDLAD 60 Query: 61 PAAARRAMEQAGTADFLINSAGINVLQSSTEMTDAGYEAVLGVNLRAALITCQAFARARI 120 AA R AM +AG DFLINSAGINVL+S +M+D GYEAVLG+NLRAAL+TCQ FARAR+ Sbjct: 61 VAATRAAMVEAGPCDFLINSAGINVLESVLDMSDEGYEAVLGINLRAALVTCQEFARARV 120 Query: 121 AAGGGGAIVNITSIAGHRGFAEHLCYAASKAGLEGATRVLAKELGAHGIRVNAVAPTITL 180 A GGGGAIVNITSIAGHRGF +HLCYAASKAGLEGATRVLAKELG HGIRVNAVAPTITL Sbjct: 121 AKGGGGAIVNITSIAGHRGFQDHLCYAASKAGLEGATRVLAKELGPHGIRVNAVAPTITL 180 Query: 181 TELAEAAWSDPAKSAPMMVRHPLQRFASAEDVARSIAMLLSADAAMLTGAVVPVDGGFLA 240 TELA AW+DPAKSAPMMVRHPLQRFA AEDVA+SIA+LLS D++M++GAV+P+DGGFLA Sbjct: 181 TELAAEAWNDPAKSAPMMVRHPLQRFAEAEDVAQSIALLLSDDSSMISGAVLPIDGGFLA 240 Query: 241 V 241 V Sbjct: 241 V 241 >ref|NP_356329.2| short chain dehydrogenase [Agrobacterium tumefaciens str. C58] ref|ZP_08530944.1| short chain dehydrogenase [Agrobacterium sp. ATCC 31749] gb|AAK89114.2| carbonyl reductase [Agrobacterium tumefaciens str. C58] gb|EGL62227.1| short chain dehydrogenase [Agrobacterium sp. ATCC 31749] Length = 241 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 191/241 (79%), Positives = 214/241 (88%) Query: 1 MEFSGTSVIITGAGKGIGRACARLMAQRGAEVIALSRTASDLASLREEIGSRSVQVDLAD 60 M+FSG SVIITGAGKGIGRACA+LMA RGAEV+A+SRT SDL SL+ EIG RS++VDLAD Sbjct: 1 MQFSGKSVIITGAGKGIGRACAQLMAARGAEVVAISRTQSDLDSLKSEIGGRSIRVDLAD 60 Query: 61 PAAARRAMEQAGTADFLINSAGINVLQSSTEMTDAGYEAVLGVNLRAALITCQAFARARI 120 AA R AM +AG DFLINSAGINVL+S +M+DAGYEAVLG+NLRAAL+TCQ FAR R+ Sbjct: 61 IAATRAAMAEAGPCDFLINSAGINVLESVLDMSDAGYEAVLGINLRAALVTCQEFARGRV 120 Query: 121 AAGGGGAIVNITSIAGHRGFAEHLCYAASKAGLEGATRVLAKELGAHGIRVNAVAPTITL 180 A GGGGAIVNITSIAGHRGF +HLCYAASKAGLEGATRVLAKELG HGIRVNAVAPTITL Sbjct: 121 ANGGGGAIVNITSIAGHRGFQDHLCYAASKAGLEGATRVLAKELGPHGIRVNAVAPTITL 180 Query: 181 TELAEAAWSDPAKSAPMMVRHPLQRFASAEDVARSIAMLLSADAAMLTGAVVPVDGGFLA 240 TELA AW+DP KS PMMVRHPL RFA AE+VA+SIA+LLS D+ M++GAV+PVDGGFLA Sbjct: 181 TELAAEAWNDPEKSQPMMVRHPLNRFAEAEEVAQSIALLLSDDSKMISGAVLPVDGGFLA 240 Query: 241 V 241 V Sbjct: 241 V 241 >ref|YP_003774492.1| 2-deoxy-D-gluconate 3-dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62584.1| 2-deoxy-D-gluconate 3-dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 204/241 (84%), Positives = 220/241 (91%) Query: 1 MEFSGTSVIITGAGKGIGRACARLMAQRGAEVIALSRTASDLASLREEIGSRSVQVDLAD 60 M F+G +VIITGAG+GIGRACA L+AQRGA+VIAL+RTASDLA L+EEIG+R + VDL+D Sbjct: 1 MSFAGKTVIITGAGRGIGRACALLLAQRGAQVIALARTASDLARLQEEIGARVIAVDLSD 60 Query: 61 PAAARRAMEQAGTADFLINSAGINVLQSSTEMTDAGYEAVLGVNLRAALITCQAFARARI 120 PAAARRAM +AGTADFLINSAGINVL+S EM+D GYEAVLGVNLRAALITCQAFAR RI Sbjct: 61 PAAARRAMAEAGTADFLINSAGINVLESVLEMSDEGYEAVLGVNLRAALITCQAFARMRI 120 Query: 121 AAGGGGAIVNITSIAGHRGFAEHLCYAASKAGLEGATRVLAKELGAHGIRVNAVAPTITL 180 A GGGGA+VNITSIAGHRGF +HLCYAASKAGLEGATRVLA+ELG HGIRVNAVAPTITL Sbjct: 121 AQGGGGAMVNITSIAGHRGFEQHLCYAASKAGLEGATRVLARELGPHGIRVNAVAPTITL 180 Query: 181 TELAEAAWSDPAKSAPMMVRHPLQRFASAEDVARSIAMLLSADAAMLTGAVVPVDGGFLA 240 TELAEAAWSDPAKS PMM RHP RFAS EDVARSIAMLLS DAAML GAVVPVDGGFLA Sbjct: 181 TELAEAAWSDPAKSGPMMARHPSARFASPEDVARSIAMLLSPDAAMLNGAVVPVDGGFLA 240 Query: 241 V 241 V Sbjct: 241 V 241 >ref|YP_915943.1| short chain dehydrogenase [Paracoccus denitrificans PD1222] gb|ABL70247.1| short-chain dehydrogenase/reductase SDR [Paracoccus denitrificans PD1222] Length = 245 Score = 307 bits (787), Expect = 8e-82, Method: Composition-based stats. Identities = 194/241 (80%), Positives = 216/241 (89%) Query: 1 MEFSGTSVIITGAGKGIGRACARLMAQRGAEVIALSRTASDLASLREEIGSRSVQVDLAD 60 M+FSG +VIITGAGKGIGRACARLMA RGAEV+ALSRT SDL SL EIG+R ++VDLAD Sbjct: 5 MQFSGKTVIITGAGKGIGRACARLMATRGAEVVALSRTQSDLDSLAAEIGARGIRVDLAD 64 Query: 61 PAAARRAMEQAGTADFLINSAGINVLQSSTEMTDAGYEAVLGVNLRAALITCQAFARARI 120 P AAR AM +AGTAD+L+NSAGINVL+S +MT+AGYEAVLG+NLRAALI CQ FAR R+ Sbjct: 65 PVAARAAMAEAGTADYLVNSAGINVLESVLDMTEAGYEAVLGINLRAALICCQEFARGRV 124 Query: 121 AAGGGGAIVNITSIAGHRGFAEHLCYAASKAGLEGATRVLAKELGAHGIRVNAVAPTITL 180 AAGGGGAIVNITSIAGHRGF +HLCYAASKAGLEGATRVLAKELG HGIRVNAVAPTITL Sbjct: 125 AAGGGGAIVNITSIAGHRGFQDHLCYAASKAGLEGATRVLAKELGPHGIRVNAVAPTITL 184 Query: 181 TELAEAAWSDPAKSAPMMVRHPLQRFASAEDVARSIAMLLSADAAMLTGAVVPVDGGFLA 240 TELA AWSDPAKS PMMVRHPL RFA AE+VA+ IA+LLS D+ M++GAV+PVDGGFLA Sbjct: 185 TELAAEAWSDPAKSQPMMVRHPLDRFAEAEEVAQGIALLLSEDSRMVSGAVLPVDGGFLA 244 Query: 241 V 241 V Sbjct: 245 V 245