BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0855.p (381 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774475.1| sugar ABC transporter permease [Herbaspirill... 565 e-159 ref|ZP_04947771.1| Ribose/xylose/arabinose/galactoside ABC-type ... 526 e-147 ref|ZP_02888221.1| Monosaccharide-transporting ATPase [Burkholde... 525 e-147 ref|YP_001583576.1| monosaccharide-transporting ATPase [Burkhold... 525 e-147 ref|ZP_03573436.1| inner-membrane translocator [Burkholderia mul... 525 e-147 >ref|YP_003774475.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62567.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 347 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 338/347 (97%), Positives = 342/347 (98%), Gaps = 1/347 (0%) Query: 36 MANQIHSAPSAST-MANTASPSGLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEV 94 MAN IHSA SAST MANTAS GLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEV Sbjct: 1 MANNIHSATSASTTMANTASAQGLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEV 60 Query: 95 DNLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIA 154 DNLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIA Sbjct: 61 DNLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIA 120 Query: 155 AAIFFGALSGWVSGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIA 214 AAIFFGALSGW+SGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIA Sbjct: 121 AAIFFGALSGWISGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIA 180 Query: 215 QDSLIGDLIPSLPIPNAVLILFIVAIGASVILNKTVFGRYTFALGSNEEALRLSGVKVDF 274 QDSLIGDLIPSLPIPNAVLILF+VAIGAS+ILNKTVFGRYTFALGSNEEALRLSGVKVDF Sbjct: 181 QDSLIGDLIPSLPIPNAVLILFLVAIGASIILNKTVFGRYTFALGSNEEALRLSGVKVDF 240 Query: 275 WKVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGT 334 WKVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGT Sbjct: 241 WKVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGT 300 Query: 335 IIGAFIMSVLVNGLRIMSVAQEWQTVVTGIIIILAVYLDILRRRRRA 381 IIGAFIMSVLVNGLRIMSVAQEWQTVVTG+IIILAVYLDILRRRRRA Sbjct: 301 IIGAFIMSVLVNGLRIMSVAQEWQTVVTGVIIILAVYLDILRRRRRA 347 >ref|ZP_04947771.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component [Burkholderia dolosa AUO158] gb|EAY70942.1| Ribose/xylose/arabinose/galactoside ABC-type transport systems permease component [Burkholderia dolosa AUO158] Length = 345 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 294/345 (85%), Positives = 320/345 (92%) Query: 36 MANQIHSAPSASTMANTASPSGLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEVD 95 M+N H P +T A SGLRAR FNPAARQKLLAFASL+L+I FFS AS NF+EVD Sbjct: 1 MSNDTHPVPPLATGDTPAGASGLRARFFNPAARQKLLAFASLVLLIAFFSVASSNFLEVD 60 Query: 96 NLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIAA 155 NLV+ILQ+TAVNGVLA+ACTYVIITSGIDLSVGT+MTFCAVMAGVVLTNWGMPLPLGIAA Sbjct: 61 NLVAILQATAVNGVLAVACTYVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAA 120 Query: 156 AIFFGALSGWVSGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIAQ 215 A+ FGALSG VSG VIAK+KVPPFIATLGMMMLLKGLSLVISGTRPIYFNDT GF++IAQ Sbjct: 121 ALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQ 180 Query: 216 DSLIGDLIPSLPIPNAVLILFIVAIGASVILNKTVFGRYTFALGSNEEALRLSGVKVDFW 275 DSL+G LIP+LPIPNAVLILF+VAIGAS++LN+T+FGRYTFALGSNEEALRLSGV VD W Sbjct: 181 DSLLGSLIPALPIPNAVLILFVVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDGW 240 Query: 276 KVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGTI 335 K+AVYTFSGA+CGIAGL+IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGG G+ILGTI Sbjct: 241 KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSILGTI 300 Query: 336 IGAFIMSVLVNGLRIMSVAQEWQTVVTGIIIILAVYLDILRRRRR 380 IGAFIMSVL NGLRIMSVAQEWQTVVTG+IIILAVY+DILRRRRR Sbjct: 301 IGAFIMSVLTNGLRIMSVAQEWQTVVTGVIIILAVYVDILRRRRR 345 >ref|ZP_02888221.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria IOP40-10] ref|ZP_02904702.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5] gb|EDT06195.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria IOP40-10] gb|EDT44200.1| Monosaccharide-transporting ATPase [Burkholderia ambifaria MEX-5] Length = 345 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 292/345 (84%), Positives = 319/345 (92%) Query: 36 MANQIHSAPSASTMANTASPSGLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEVD 95 M N H P +T A +GL+AR FNPAARQKLLAFASL+L+I FFSFASPNF++VD Sbjct: 1 MPNDTHPVPPLATGDTPAGAAGLKARFFNPAARQKLLAFASLVLLIAFFSFASPNFLDVD 60 Query: 96 NLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIAA 155 NLVSILQ+TAVNGVLA+ACTYVIITSGIDLSVGT+MTFCAVMAGVVLT WGMPLPLGI A Sbjct: 61 NLVSILQATAVNGVLAVACTYVIITSGIDLSVGTLMTFCAVMAGVVLTKWGMPLPLGILA 120 Query: 156 AIFFGALSGWVSGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIAQ 215 A+ FGALSG VSG VIAK+KVPPFIATLGMMMLLKGLSLVISGTRPIYFNDT GF++IAQ Sbjct: 121 ALCFGALSGSVSGFVIAKMKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTPGFTSIAQ 180 Query: 216 DSLIGDLIPSLPIPNAVLILFIVAIGASVILNKTVFGRYTFALGSNEEALRLSGVKVDFW 275 DSLIG LIP+LPIPNAVLILF+VAIGAS++LN+T+FGRYTFALGSNEEALRLSGV VD W Sbjct: 181 DSLIGSLIPALPIPNAVLILFLVAIGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW 240 Query: 276 KVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGTI 335 K+AVYTFSGA+CGIAGL+IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGG G+I+GTI Sbjct: 241 KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTI 300 Query: 336 IGAFIMSVLVNGLRIMSVAQEWQTVVTGIIIILAVYLDILRRRRR 380 IGAFIMSVL NGLRIMSVAQEWQTVVTG+IIILAVY+DILRRRRR Sbjct: 301 IGAFIMSVLTNGLRIMSVAQEWQTVVTGVIIILAVYVDILRRRRR 345 >ref|YP_001583576.1| monosaccharide-transporting ATPase [Burkholderia multivorans ATCC 17616] ref|YP_001949299.1| simple sugar transport system permease protein [Burkholderia multivorans ATCC 17616] gb|ABX17284.1| Monosaccharide-transporting ATPase [Burkholderia multivorans ATCC 17616] dbj|BAG46763.1| simple sugar transport system permease protein [Burkholderia multivorans ATCC 17616] Length = 345 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 291/345 (84%), Positives = 322/345 (93%) Query: 36 MANQIHSAPSASTMANTASPSGLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEVD 95 M+N H P ++ A+ SGLRARLFNPA RQ+LLAFASL+L+I+FF ASPNF+EVD Sbjct: 1 MSNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVD 60 Query: 96 NLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIAA 155 NLV+ILQ+TAVNGVLA+ACTYVIITSGIDLSVGT+MTFCAVMAGVVLTNWGMPLPLGIAA Sbjct: 61 NLVAILQATAVNGVLAVACTYVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAA 120 Query: 156 AIFFGALSGWVSGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIAQ 215 A+ FGALSG VSG VIAK+KVPPFIATLGMMMLLKGLSLVISGTRPIYFNDT GF+AIAQ Sbjct: 121 ALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQ 180 Query: 216 DSLIGDLIPSLPIPNAVLILFIVAIGASVILNKTVFGRYTFALGSNEEALRLSGVKVDFW 275 DSLIG L+P+LPIPNAVLILF+VA+GAS++LN+T+FGRYTFALGSNEEALRLSGV VD W Sbjct: 181 DSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW 240 Query: 276 KVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGTI 335 K+AVYTFSGA+CGIAGL+IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGG G+I+GTI Sbjct: 241 KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIVGTI 300 Query: 336 IGAFIMSVLVNGLRIMSVAQEWQTVVTGIIIILAVYLDILRRRRR 380 IGAFIMSVL NGLRIMSVAQEWQTVVTG+IIILAVY+DILRRRRR Sbjct: 301 IGAFIMSVLTNGLRIMSVAQEWQTVVTGVIIILAVYVDILRRRRR 345 >ref|ZP_03573436.1| inner-membrane translocator [Burkholderia multivorans CGD2M] ref|ZP_03579088.1| inner-membrane translocator [Burkholderia multivorans CGD2] gb|EEE06519.1| inner-membrane translocator [Burkholderia multivorans CGD2] gb|EEE12140.1| inner-membrane translocator [Burkholderia multivorans CGD2M] Length = 345 Score = 525 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 291/345 (84%), Positives = 321/345 (93%) Query: 36 MANQIHSAPSASTMANTASPSGLRARLFNPAARQKLLAFASLLLMILFFSFASPNFMEVD 95 M+N H P ++ A+ SGLRARLFNPA RQ+LLAFASL+L+I+FF ASPNF+EVD Sbjct: 1 MSNDTHPVPPLASGDAPAAASGLRARLFNPATRQRLLAFASLVLLIVFFGAASPNFLEVD 60 Query: 96 NLVSILQSTAVNGVLAIACTYVIITSGIDLSVGTMMTFCAVMAGVVLTNWGMPLPLGIAA 155 NLV+ILQ+TAVNGVLA+ACTYVIITSGIDLSVGT+MTFCAVMAGVVLTNWGMPLPLGIAA Sbjct: 61 NLVAILQATAVNGVLAVACTYVIITSGIDLSVGTLMTFCAVMAGVVLTNWGMPLPLGIAA 120 Query: 156 AIFFGALSGWVSGMVIAKLKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTEGFSAIAQ 215 A+ FGALSG VSG VIAK+KVPPFIATLGMMMLLKGLSLVISGTRPIYFNDT GF+AIAQ Sbjct: 121 ALGFGALSGCVSGFVIAKMKVPPFIATLGMMMLLKGLSLVISGTRPIYFNDTPGFTAIAQ 180 Query: 216 DSLIGDLIPSLPIPNAVLILFIVAIGASVILNKTVFGRYTFALGSNEEALRLSGVKVDFW 275 DSLIG L+P+LPIPNAVLILF+VA+GAS++LN+T+FGRYTFALGSNEEALRLSGV VD W Sbjct: 181 DSLIGHLVPALPIPNAVLILFVVAVGASIVLNRTIFGRYTFALGSNEEALRLSGVNVDAW 240 Query: 276 KVAVYTFSGAICGIAGLIIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTILGTI 335 K+AVYTFSGA+CGIAGL+IASRLNSAQPALGQGYELDAIAAVVIGGTSLSGG G+I GTI Sbjct: 241 KIAVYTFSGAVCGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGAGSIAGTI 300 Query: 336 IGAFIMSVLVNGLRIMSVAQEWQTVVTGIIIILAVYLDILRRRRR 380 IGAFIMSVL NGLRIMSVAQEWQTVVTG+IIILAVY+DILRRRRR Sbjct: 301 IGAFIMSVLTNGLRIMSVAQEWQTVVTGVIIILAVYVDILRRRRR 345