BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0850.p (425 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774471.1| hypothetical protein Hsero_1046 [Herbaspiril... 863 0.0 ref|YP_004752753.1| L-fuconate dehydratase [Collimonas fungivora... 784 0.0 gb|EGD01661.1| mandelate racemase/muconate lactonizing protein [... 766 0.0 ref|YP_371380.1| mandelate racemase/muconate lactonizing protein... 761 0.0 ref|YP_001811631.1| mandelate racemase/muconate lactonizing prot... 761 0.0 >ref|YP_003774471.1| hypothetical protein Hsero_1046 [Herbaspirillum seropedicae SmR1] gb|ADJ62563.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 425 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 407/425 (95%), Positives = 416/425 (97%) Query: 1 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDNEQLKGHGLTFTIGRGNE 60 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDN LKGHGLTFTIGRGNE Sbjct: 1 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDNAALKGHGLTFTIGRGNE 60 Query: 61 ICCAAIRAMEHLVVGLDLDWIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW 120 ICCAAIRAMEHLVVGL+L+WIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW Sbjct: 61 ICCAAIRAMEHLVVGLELEWIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW 120 Query: 121 DLWAKADGKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLRILE 180 DLWAKA+GKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLR+LE Sbjct: 121 DLWAKAEGKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLRVLE 180 Query: 181 QEGYPCYTTSAGWLGYDDAKLRRLCQEAIDQGFNYVKLKVGRDLEDDKRRVRIAREVLGP 240 QEGYPCYTTSAGWLGY+DAKLRRLCQEAIDQGFN+VKLKVGRDL DDKRRV IAREVLGP Sbjct: 181 QEGYPCYTTSAGWLGYEDAKLRRLCQEAIDQGFNHVKLKVGRDLADDKRRVTIAREVLGP 240 Query: 241 ERNLMIDANQVWEVDQAIDWVNELAFAQPWFIEEPTSPDDVEGHRKIRAGIGAVKVATGE 300 ER LMIDANQVWEV QAIDWVN+LAFAQPWFIEEPTSPDDVEGHRKIR GIGAVKVATGE Sbjct: 241 ERKLMIDANQVWEVHQAIDWVNQLAFAQPWFIEEPTSPDDVEGHRKIREGIGAVKVATGE 300 Query: 301 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV 360 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV Sbjct: 301 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV 360 Query: 361 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVIRNAAYMPPSLPGFSIEMKPASLEQ 420 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCV++NAAYMPPS PGFSIEMKP SLEQ Sbjct: 361 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVVKNAAYMPPSRPGFSIEMKPQSLEQ 420 Query: 421 YRFRG 425 YRFRG Sbjct: 421 YRFRG 425 >ref|YP_004752753.1| L-fuconate dehydratase [Collimonas fungivorans Ter331] gb|AEK61930.1| L-fuconate dehydratase [Collimonas fungivorans Ter331] Length = 511 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 359/425 (84%), Positives = 396/425 (93%) Query: 1 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDNEQLKGHGLTFTIGRGNE 60 MT I ++RVLDVRFPTSQ LDGSDAMNPDPDYSAAYV+L+TD L+GHGLTFTIGRGNE Sbjct: 87 MTTIRSIRVLDVRFPTSQMLDGSDAMNPDPDYSAAYVVLETDQPGLEGHGLTFTIGRGNE 146 Query: 61 ICCAAIRAMEHLVVGLDLDWIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW 120 ICCAAI+AMEHLVVGL LDWI+ADMGRFWRH+TSDSQLRWIGPDKGAIHLATGAVVNA W Sbjct: 147 ICCAAIKAMEHLVVGLKLDWISADMGRFWRHITSDSQLRWIGPDKGAIHLATGAVVNAVW 206 Query: 121 DLWAKADGKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLRILE 180 DLWAKA+GKP+W+LV DMSPEELVR IDFRY+TDCITP+EALA+LR +E GKAER+R L+ Sbjct: 207 DLWAKAEGKPLWQLVTDMSPEELVRAIDFRYLTDCITPEEALAMLRAQEPGKAERIRSLQ 266 Query: 181 QEGYPCYTTSAGWLGYDDAKLRRLCQEAIDQGFNYVKLKVGRDLEDDKRRVRIAREVLGP 240 ++GYPCYTTSAGWLGY+DAKLRRLCQEA+D GFN++KLKVGRDLEDD RRV IAREV+G Sbjct: 267 RDGYPCYTTSAGWLGYEDAKLRRLCQEAVDNGFNHIKLKVGRDLEDDIRRVTIAREVIGQ 326 Query: 241 ERNLMIDANQVWEVDQAIDWVNELAFAQPWFIEEPTSPDDVEGHRKIRAGIGAVKVATGE 300 +R LMIDANQVWEVDQAIDWVNELAFA+PWFIEEPTSPDD+EGHRKIR GIGAVKVATGE Sbjct: 327 DRQLMIDANQVWEVDQAIDWVNELAFAKPWFIEEPTSPDDIEGHRKIREGIGAVKVATGE 386 Query: 301 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV 360 MCQNR++FKQ IMR AIDVVQIDSCRLGGVNEILAV+LMAAKY VCPHAGGVGLCEYV Sbjct: 387 MCQNRIIFKQLIMRGAIDVVQIDSCRLGGVNEILAVLLMAAKYKLPVCPHAGGVGLCEYV 446 Query: 361 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVIRNAAYMPPSLPGFSIEMKPASLEQ 420 QHLSMIDY+CISG+ EGRVTEYVDHLHEHFV+PCVIR+A YMPP+ PGFSI MKP SLE+ Sbjct: 447 QHLSMIDYVCISGTMEGRVTEYVDHLHEHFVEPCVIRDANYMPPAAPGFSITMKPESLEK 506 Query: 421 YRFRG 425 Y+FRG Sbjct: 507 YQFRG 511 >gb|EGD01661.1| mandelate racemase/muconate lactonizing protein [Burkholderia sp. TJI49] Length = 425 Score = 766 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 356/425 (83%), Positives = 388/425 (91%) Query: 1 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDNEQLKGHGLTFTIGRGNE 60 M I ++RVLDVRFPTSQ LDGSDAMNPDPDYSAAYV+L+TD++ L+GHGLTFTIGRGNE Sbjct: 1 MPIIRSMRVLDVRFPTSQKLDGSDAMNPDPDYSAAYVVLETDHDGLEGHGLTFTIGRGNE 60 Query: 61 ICCAAIRAMEHLVVGLDLDWIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW 120 ICCAAI AM HLVVGLDLDWI DMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNA W Sbjct: 61 ICCAAIAAMRHLVVGLDLDWIREDMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAVW 120 Query: 121 DLWAKADGKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLRILE 180 DLWAKA GKP+W+LVADMSPEELVR IDFRY+TDC+TPDE L LLR + GKAER+ LE Sbjct: 121 DLWAKAAGKPLWRLVADMSPEELVRAIDFRYLTDCLTPDETLDLLRRQAPGKAERIATLE 180 Query: 181 QEGYPCYTTSAGWLGYDDAKLRRLCQEAIDQGFNYVKLKVGRDLEDDKRRVRIAREVLGP 240 +EGYPCYTTSAGWLGY D KLRRLC+EA+D GF+YVKLKVG +LEDD RRV IAREV+GP Sbjct: 181 REGYPCYTTSAGWLGYSDDKLRRLCREAVDAGFDYVKLKVGANLEDDIRRVTIAREVIGP 240 Query: 241 ERNLMIDANQVWEVDQAIDWVNELAFAQPWFIEEPTSPDDVEGHRKIRAGIGAVKVATGE 300 +R LMIDANQVWEVD+AIDWV ELAFA+PWFIEEPTSPDDVEGHR+IR IG V+VATGE Sbjct: 241 DRKLMIDANQVWEVDEAIDWVRELAFARPWFIEEPTSPDDVEGHRRIREAIGPVQVATGE 300 Query: 301 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV 360 MCQNRVLFKQFI R AIDVVQID+CRLGGVNEILAVML+AAKYG VCPHAGGVGLCEYV Sbjct: 301 MCQNRVLFKQFIARGAIDVVQIDACRLGGVNEILAVMLLAAKYGLPVCPHAGGVGLCEYV 360 Query: 361 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVIRNAAYMPPSLPGFSIEMKPASLEQ 420 QHLSMIDY+CI+G++EGRV EYVDHLHEHFVDPCVIRNAAY+PP+ PGFSIEMKP SLEQ Sbjct: 361 QHLSMIDYVCIAGTREGRVIEYVDHLHEHFVDPCVIRNAAYLPPTAPGFSIEMKPESLEQ 420 Query: 421 YRFRG 425 YRFRG Sbjct: 421 YRFRG 425 >ref|YP_371380.1| mandelate racemase/muconate lactonizing protein [Burkholderia sp. 383] gb|ABB10736.1| Mandelate racemase/muconate lactonizing enzyme [Burkholderia sp. 383] Length = 425 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 355/425 (83%), Positives = 388/425 (91%) Query: 1 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDNEQLKGHGLTFTIGRGNE 60 M I ++RVLDVRFPTS+ LDGSDAMNPDPDYSAAYV+L+TD + L+GHGLTFTIGRGNE Sbjct: 1 MPIIRSMRVLDVRFPTSRQLDGSDAMNPDPDYSAAYVVLETDRDGLEGHGLTFTIGRGNE 60 Query: 61 ICCAAIRAMEHLVVGLDLDWIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW 120 ICCAAI AM HLVVGLDLDWI ADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNA W Sbjct: 61 ICCAAIDAMRHLVVGLDLDWIRADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAVW 120 Query: 121 DLWAKADGKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLRILE 180 DLWAKA+ KP+W+LVADMSPEELVR IDFRY+TDC+TPDEAL LLR + GKAER+ +LE Sbjct: 121 DLWAKAERKPLWRLVADMSPEELVRAIDFRYLTDCLTPDEALDLLRRQVPGKAERIALLE 180 Query: 181 QEGYPCYTTSAGWLGYDDAKLRRLCQEAIDQGFNYVKLKVGRDLEDDKRRVRIAREVLGP 240 ++GYPCYTTSAGWLGY D KLRRLC+EA++ GF YVKLKVG +LEDD RRV IAREV+GP Sbjct: 181 RDGYPCYTTSAGWLGYSDDKLRRLCREAVEAGFEYVKLKVGANLEDDIRRVTIAREVIGP 240 Query: 241 ERNLMIDANQVWEVDQAIDWVNELAFAQPWFIEEPTSPDDVEGHRKIRAGIGAVKVATGE 300 +R LMIDANQVWEVD+AIDWV ELAFA+PWFIEEPTSPDDVEGHRKIR I V+VATGE Sbjct: 241 DRKLMIDANQVWEVDEAIDWVRELAFARPWFIEEPTSPDDVEGHRKIREAIAPVQVATGE 300 Query: 301 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV 360 MCQNRVLFKQFI R AIDVVQID+CRLGGVNEILAVMLMAAKYG VCPHAGGVGLCEYV Sbjct: 301 MCQNRVLFKQFIARGAIDVVQIDACRLGGVNEILAVMLMAAKYGLPVCPHAGGVGLCEYV 360 Query: 361 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVIRNAAYMPPSLPGFSIEMKPASLEQ 420 QHLSMIDY+CI+G+KEGRVTEYVDHLHEHFV+PCV+R AAYMPP+ PGFSIEMKP SLEQ Sbjct: 361 QHLSMIDYICIAGTKEGRVTEYVDHLHEHFVEPCVVRGAAYMPPTAPGFSIEMKPGSLEQ 420 Query: 421 YRFRG 425 YRFRG Sbjct: 421 YRFRG 425 >ref|YP_001811631.1| mandelate racemase/muconate lactonizing protein [Burkholderia ambifaria MC40-6] gb|ACB67415.1| Mandelate racemase/muconate lactonizing protein [Burkholderia ambifaria MC40-6] Length = 425 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 355/425 (83%), Positives = 388/425 (91%) Query: 1 MTKITALRVLDVRFPTSQSLDGSDAMNPDPDYSAAYVILDTDNEQLKGHGLTFTIGRGNE 60 M I ++RVLDVRFPTS+ LDGSDAMNPDPDYSAAYV+L+TD++ L+GHGLTFTIGRGNE Sbjct: 1 MPIIRSMRVLDVRFPTSRELDGSDAMNPDPDYSAAYVVLETDHDGLEGHGLTFTIGRGNE 60 Query: 61 ICCAAIRAMEHLVVGLDLDWIAADMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAAW 120 ICCAAI AM HLVVGLDLDWI DMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNA W Sbjct: 61 ICCAAIDAMRHLVVGLDLDWIREDMGRFWRHVTSDSQLRWIGPDKGAIHLATGAVVNAVW 120 Query: 121 DLWAKADGKPVWKLVADMSPEELVRTIDFRYITDCITPDEALALLREKEAGKAERLRILE 180 DLWAKA GKP+W+LVADMSPEE+VR IDFRY+TDC+T +EALALLR + GKA R+ LE Sbjct: 121 DLWAKAAGKPLWRLVADMSPEEIVRAIDFRYLTDCLTQEEALALLRRQAPGKAARIATLE 180 Query: 181 QEGYPCYTTSAGWLGYDDAKLRRLCQEAIDQGFNYVKLKVGRDLEDDKRRVRIAREVLGP 240 ++GYPCYTTSAGWLGY D KLRRLC+EA+D GF+YVKLKVG +LEDD RRV IAREV+GP Sbjct: 181 RDGYPCYTTSAGWLGYSDDKLRRLCREAVDAGFDYVKLKVGANLEDDIRRVTIAREVIGP 240 Query: 241 ERNLMIDANQVWEVDQAIDWVNELAFAQPWFIEEPTSPDDVEGHRKIRAGIGAVKVATGE 300 ER LMIDANQVWEVD+AIDWV ELAFA+PWFIEEPTSPDDVEGHRKIR I V+VATGE Sbjct: 241 ERKLMIDANQVWEVDEAIDWVRELAFAKPWFIEEPTSPDDVEGHRKIREAIAPVQVATGE 300 Query: 301 MCQNRVLFKQFIMRDAIDVVQIDSCRLGGVNEILAVMLMAAKYGKVVCPHAGGVGLCEYV 360 MCQNRVLFKQFI R AIDVVQID+CRLGGVNEILAVML+AAKYG VCPHAGGVGLCEYV Sbjct: 301 MCQNRVLFKQFIARGAIDVVQIDACRLGGVNEILAVMLLAAKYGLPVCPHAGGVGLCEYV 360 Query: 361 QHLSMIDYLCISGSKEGRVTEYVDHLHEHFVDPCVIRNAAYMPPSLPGFSIEMKPASLEQ 420 QHLSMIDY+CISG+KEGRVTEYVDHLHEHFV+PCV+R AAYMPP+ PGFSIEMKPASLEQ Sbjct: 361 QHLSMIDYVCISGTKEGRVTEYVDHLHEHFVEPCVVRGAAYMPPTAPGFSIEMKPASLEQ 420 Query: 421 YRFRG 425 YRFRG Sbjct: 421 YRFRG 425