BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0843.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774466.1| dehydrogenase oxidoreductase [Herbaspirillum... 506 e-141 ref|YP_004751964.1| putative L-arabinose 1-dehydrogenase [Collim... 393 e-107 ref|ZP_08406869.1| short-chain dehydrogenase/reductase SDR [Hyle... 314 9e-84 ref|YP_002942958.1| short-chain dehydrogenase/reductase SDR [Var... 312 3e-83 ref|YP_004235353.1| short-chain dehydrogenase/reductase SDR [Aci... 311 8e-83 >ref|YP_003774466.1| dehydrogenase oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ62558.1| dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 257/261 (98%), Positives = 260/261 (99%) Query: 1 MSNTPQNVQLANFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCN 60 MSNTPQNVQLA+FPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCN Sbjct: 1 MSNTPQNVQLASFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCN 60 Query: 61 DIAAAGHPKPLFRHCDLRDIPAFQATIAELQGQLGDFDVLVNNAANDQRHKLEEVTLEYW 120 ++AAAGHPKPLFRHCDLRDIPAFQATIAELQ QLGDFDVLVNNAANDQRHKLEEVTLEYW Sbjct: 61 EVAAAGHPKPLFRHCDLRDIPAFQATIAELQAQLGDFDVLVNNAANDQRHKLEEVTLEYW 120 Query: 121 NDRIAINQRPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTR 180 NDRIAINQRPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTR Sbjct: 121 NDRIAINQRPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTR 180 Query: 181 GLARDLGPHKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLF 240 GLARDLGPHKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLF Sbjct: 181 GLARDLGPHKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLF 240 Query: 241 LAADDSAMCTAQEFIVDAGWV 261 LAADDSAMCTAQEFIVDAGWV Sbjct: 241 LAADDSAMCTAQEFIVDAGWV 261 >ref|YP_004751964.1| putative L-arabinose 1-dehydrogenase [Collimonas fungivorans Ter331] gb|AEK61141.1| putative L-arabinose 1-dehydrogenase [Collimonas fungivorans Ter331] Length = 260 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 197/255 (77%), Positives = 221/255 (86%) Query: 6 QNVQLANFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCNDIAAA 65 ++ QLA+FPSLKGK VF+TGGG+GIGAAIV AFA+QGA VAFVDI T ASEALC +AAA Sbjct: 5 KDTQLAHFPSLKGKNVFVTGGGSGIGAAIVGAFAEQGARVAFVDIETAASEALCEQLAAA 64 Query: 66 GHPKPLFRHCDLRDIPAFQATIAELQGQLGDFDVLVNNAANDQRHKLEEVTLEYWNDRIA 125 G P+PLFRHCD+RDI A Q+TI L +LGDFDVLVNNAANDQRH+ EEVT++YWNDRIA Sbjct: 65 GLPRPLFRHCDIRDIAALQSTIEGLAQELGDFDVLVNNAANDQRHQWEEVTVDYWNDRIA 124 Query: 126 INQRPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTRGLARD 185 INQRP FF Q+V GM+++GGGSIIN SSISWH S GG+PVYTTAKA+ +GLTRGLARD Sbjct: 125 INQRPMFFTCQAVAPGMRKKGGGSIINLSSISWHLSNGGYPVYTTAKAAVVGLTRGLARD 184 Query: 186 LGPHKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLFLAADD 245 LGPH IRVNTV+PGWVMTERQI LWLD G++ I RNQCL G L PWHLARMVLFLAADD Sbjct: 185 LGPHNIRVNTVSPGWVMTERQIALWLDAAGEEDIKRNQCLPGKLQPWHLARMVLFLAADD 244 Query: 246 SAMCTAQEFIVDAGW 260 SAMCTAQEFIVDAGW Sbjct: 245 SAMCTAQEFIVDAGW 259 >ref|ZP_08406869.1| short-chain dehydrogenase/reductase SDR [Hylemonella gracilis ATCC 19624] gb|EGI76035.1| short-chain dehydrogenase/reductase SDR [Hylemonella gracilis ATCC 19624] Length = 264 Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats. Identities = 160/253 (63%), Positives = 195/253 (77%) Query: 9 QLANFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCNDIAAAGHP 68 Q + FPSLK + VFITGGG+GIGAAIV AFA+QGA VAFVD+A +ASE L +A AGH Sbjct: 12 QFSRFPSLKDRAVFITGGGSGIGAAIVSAFAEQGARVAFVDVARDASEKLAQQVADAGHA 71 Query: 69 KPLFRHCDLRDIPAFQATIAELQGQLGDFDVLVNNAANDQRHKLEEVTLEYWNDRIAINQ 128 +P +R CD+RD+ A Q+ I + +LGDF LVNN AND RH LE VT EY+++R+AIN+ Sbjct: 72 RPWWRVCDVRDVKALQSAIQDAAKELGDFSALVNNVANDDRHTLESVTPEYYDERMAINE 131 Query: 129 RPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTRGLARDLGP 188 RP+FFA+Q+VV GM+R G GS+IN S W GG +P Y AK+S GLTRGLA+ LG Sbjct: 132 RPAFFAIQAVVPGMRRLGAGSVINLGSTGWQGKGGAYPCYAIAKSSVNGLTRGLAKPLGR 191 Query: 189 HKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLFLAADDSAM 248 +IR+NTV+PGWVMTERQIKLWLD EG++ I RNQCL L P +ARMVLFLA+DD+AM Sbjct: 192 DRIRINTVSPGWVMTERQIKLWLDAEGEQEIQRNQCLPDKLQPHDIARMVLFLASDDAAM 251 Query: 249 CTAQEFIVDAGWV 261 CTAQEF VDAGWV Sbjct: 252 CTAQEFKVDAGWV 264 >ref|YP_002942958.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] gb|ACS17692.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus S110] Length = 258 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 158/260 (60%), Positives = 197/260 (75%), Gaps = 3/260 (1%) Query: 1 MSNTPQNVQLANFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCN 60 M ++PQ L+ PSLKG+ VF+TGGG+GIGAA+V AFA QGA VAFVDIA AS AL Sbjct: 1 MKDSPQ---LSIHPSLKGRTVFVTGGGSGIGAAMVAAFAAQGARVAFVDIAEGASAALAQ 57 Query: 61 DIAAAGHPKPLFRHCDLRDIPAFQATIAELQGQLGDFDVLVNNAANDQRHKLEEVTLEYW 120 IA GH P +R CD+RDI A Q IA+ +LGDF VLVNN A+D RH LE VT +Y+ Sbjct: 58 RIAQEGHAAPWWRACDVRDIGALQKAIADAAAELGDFAVLVNNVASDDRHTLESVTPDYY 117 Query: 121 NDRIAINQRPSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTR 180 ++R+AIN+RP+ FA+QSVV GM+R G GS+IN S W G G+P Y AK+S GLTR Sbjct: 118 DNRMAINERPALFAIQSVVPGMRRLGFGSVINLGSTGWQTKGSGYPCYAIAKSSVNGLTR 177 Query: 181 GLARDLGPHKIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLF 240 GLA +LG +IR+NTV+PGWVMTERQ++LWLD+EG++++ RNQCL L+P +ARMVLF Sbjct: 178 GLAVELGRDRIRINTVSPGWVMTERQVQLWLDDEGEQSLKRNQCLPDKLMPEDIARMVLF 237 Query: 241 LAADDSAMCTAQEFIVDAGW 260 LA+DD+ MCTAQEF VDAGW Sbjct: 238 LASDDARMCTAQEFTVDAGW 257 >ref|YP_004235353.1| short-chain dehydrogenase/reductase SDR [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX46786.1| short-chain dehydrogenase/reductase SDR [Acidovorax avenae subsp. avenae ATCC 19860] Length = 271 Score = 311 bits (796), Expect = 8e-83, Method: Composition-based stats. Identities = 158/252 (62%), Positives = 196/252 (77%) Query: 10 LANFPSLKGKRVFITGGGTGIGAAIVEAFAQQGAHVAFVDIATEASEALCNDIAAAGHPK 69 L+ FPSL+G+ VF+TGGG+GIGAAIV AFA+QGA VAFVD+A EAS L +D+ AAG P+ Sbjct: 20 LSVFPSLRGRVVFVTGGGSGIGAAIVTAFAEQGARVAFVDVAREASAQLASDLEAAGLPR 79 Query: 70 PLFRHCDLRDIPAFQATIAELQGQLGDFDVLVNNAANDQRHKLEEVTLEYWNDRIAINQR 129 P +R CD+RDI A QA + + +LGD VLVNN A+D RH LE VT Y+++R+AIN+R Sbjct: 80 PWWRECDVRDIDALQAAVRDAAAELGDVSVLVNNVASDDRHTLESVTPAYYDERMAINER 139 Query: 130 PSFFAVQSVVEGMKRRGGGSIINFSSISWHQSGGGFPVYTTAKASTLGLTRGLARDLGPH 189 P+FFA+Q+VV GM+R GGGSI+N S W G G+P Y AK+S GLTRGLAR LG Sbjct: 140 PAFFAIQAVVPGMRRLGGGSIVNLGSTGWQGKGSGYPCYAIAKSSVNGLTRGLARTLGQD 199 Query: 190 KIRVNTVTPGWVMTERQIKLWLDEEGKKAIARNQCLQGDLLPWHLARMVLFLAADDSAMC 249 +IR+NTV+PGWVMTERQI+LWLD EG++ + RNQCL L P +ARMVLFL +DD+AMC Sbjct: 200 RIRINTVSPGWVMTERQIRLWLDAEGERELERNQCLPDKLQPRDIARMVLFLGSDDAAMC 259 Query: 250 TAQEFIVDAGWV 261 TAQEF VDAGWV Sbjct: 260 TAQEFKVDAGWV 271