BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0833.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774457.1| galactose-1-epimerase [Herbaspirillum serope... 561 e-158 emb|CBA30247.1| hypothetical protein Csp_C22590 [Curvibacter put... 249 4e-64 ref|ZP_08406871.1| aldose 1-epimerase [Hylemonella gracilis ATCC... 238 8e-61 ref|YP_970612.1| aldose 1-epimerase [Acidovorax citrulli AAC00-1... 228 1e-57 gb|EGH72818.1| aldose 1-epimerase [Pseudomonas syringae pv. acer... 212 9e-53 >ref|YP_003774457.1| galactose-1-epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ62549.1| galactose-1-epimerase (mutarotase) protein [Herbaspirillum seropedicae SmR1] Length = 324 Score = 561 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 275/324 (84%), Positives = 296/324 (91%) Query: 13 MPSRASDAQRAGSQGLPEIHTLQSGRQRLHVLPTLGGALAGWEWQRDRKWLPLLRPWSAD 72 MPSRA+DA+RAGSQGLP+IHTLQ+GRQRLHVLP+LGGALAGWEWQR+R+WLPLLRPWSAD Sbjct: 1 MPSRATDARRAGSQGLPQIHTLQAGRQRLHVLPSLGGALAGWEWQRERQWLPLLRPWSAD 60 Query: 73 PAALYATACFPLLPWSNRITGGGFDFNGKHYPLSPNRPGEPYPIHGDSWRQAWTIVSQAD 132 PAALYATACFPLLPWSNRITGGGFDF+GKHYPL PNR GEPYPIHGDSWRQAWTI +QA+ Sbjct: 61 PAALYATACFPLLPWSNRITGGGFDFDGKHYPLVPNRLGEPYPIHGDSWRQAWTITAQAE 120 Query: 133 DRMALELDSHRCDGNPYVYRARQVLTLRENALEIELRVTNTGEETLPYGLGLHPYFLHDA 192 DRM LEL+S R DGNPYVYRARQ+LTLRENALEIELRVTNTG ETLPYGLGLHPYFL DA Sbjct: 121 DRMTLELESDRYDGNPYVYRARQLLTLRENALEIELRVTNTGTETLPYGLGLHPYFLRDA 180 Query: 193 QTRLQFRSRGVWLSGPDRIPTGFSRELPSGWDYNRAASLQGGLIDNCFEGWDGLAMIEDP 252 QTRLQFRSRGVWLSGPDRIPT F+R+LP+GWDYNR A+L+ LIDNCFEGWDGLAMIEDP Sbjct: 181 QTRLQFRSRGVWLSGPDRIPTSFTRQLPAGWDYNRPATLEDKLIDNCFEGWDGLAMIEDP 240 Query: 253 ARGLRLQMHTTDRSGYVLMFRPNGLPYFCLEPVTHPIDAFHQPNQPGLIALAPGEDMVLL 312 RGLRLQMHTTDRSGYVLMFRP +FCLEPVTHPIDAFH+P +PGLI LAPGEDMVLL Sbjct: 241 TRGLRLQMHTTDRSGYVLMFRPVKQAFFCLEPVTHPIDAFHRPKRPGLIDLAPGEDMVLL 300 Query: 313 TRFTVCEIAQEPVRATTQQTSLAR 336 TRF+VCEIAQE R S AR Sbjct: 301 TRFSVCEIAQEEPRVRPASASAAR 324 >emb|CBA30247.1| hypothetical protein Csp_C22590 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 281 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 129/269 (47%), Positives = 165/269 (61%), Gaps = 7/269 (2%) Query: 47 LGGALAGWEWQRDRKWLPLLRPWSADPAALYATACFPLLPWSNRITGGGFDFNGKHYPLS 106 +GG++A W+ + + + RPW+ P LY TA FPL+PWSNRI GGF +G HYP+ Sbjct: 1 MGGSVAAWQRDAGQGLMDIWRPWAGAPD-LYTTASFPLVPWSNRIGQGGFSHDGTHYPMH 59 Query: 107 PNRPGEPYPIHGDSWRQAWTIVSQADDRMALELDSHRCDGNPYVYRARQVLTLRENALEI 166 PNR GEPYPIHGD W Q W I D + L L+S DGNPY YRA Q LR++ ++ Sbjct: 60 PNRVGEPYPIHGDGWLQPWVIRQPRHDTLELHLESKHFDGNPYHYRALQRFVLRDDGMDQ 119 Query: 167 ELRVTNTGEETLPYGLGLHPYFLHDAQTRLQFRSRGVWLSGPDRIPTGFSRELPSGWDYN 226 L VT+ G ++LPYGLG HP FL RL + GVWLSG D +PTGF+ + P+GWD Sbjct: 120 LLEVTHLGADSLPYGLGQHPAFLRTPHARLHAQVEGVWLSGADPMPTGFTTQFPAGWDPR 179 Query: 227 RAASLQGGLIDNCFEGWDGLAMIEDPARGLRLQMH-----TTDRS-GYVLMFRPNGLPYF 280 ++ G LIDN + GW G A I+ P LRL M RS G+ L++RP +F Sbjct: 180 EGMAVSGSLIDNAYAGWSGKAHIDWPEHALRLHMRDPVVVARGRSDGFCLLYRPAEGAHF 239 Query: 281 CLEPVTHPIDAFHQPNQPGLIALAPGEDM 309 C EPVTHPIDAFH +PGL L G+ + Sbjct: 240 CFEPVTHPIDAFHMEGRPGLQVLQTGQTL 268 >ref|ZP_08406871.1| aldose 1-epimerase [Hylemonella gracilis ATCC 19624] gb|EGI76037.1| aldose 1-epimerase [Hylemonella gracilis ATCC 19624] Length = 310 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 131/299 (43%), Positives = 175/299 (58%), Gaps = 10/299 (3%) Query: 34 LQSGRQRLHVLPTLGGALAGWEWQRD---RKWLPLLRPWSADPAALYATACFPLLPWSNR 90 L+ Q L ++P+LGG++A W+ + + L L RPW LY A F ++PWSNR Sbjct: 11 LRHAGQHLGLVPSLGGSVAAWQIDQPSAPQGRLDLWRPWDVRTPDLYQLASFAMVPWSNR 70 Query: 91 ITGGGFDFNGKHYPLSPNRPGEPYPIHGDSWRQAWTIVSQADDRMALELDSHRCDGNPYV 150 I+GGGF+ G+ +P+ PNR GEPYPIHGD W Q W + A D + + L S GNPY Sbjct: 71 ISGGGFEHAGRFHPMQPNRAGEPYPIHGDGWLQPWALSQPAPDTLEMTLHSRGFQGNPYD 130 Query: 151 YRARQVLTLRENALEIELRVTNTGEETLPYGLGLHPYFLHDAQTRLQFRSRGVWLSGPDR 210 Y A Q L + L+ E+R+ + G LPYG+GLHP+F +TR+ +GVWLSG D Sbjct: 131 YEAVQTFRLVDGGLDQEVRLRHRGAAPLPYGIGLHPWFPRTPKTRITAPVQGVWLSGQDP 190 Query: 211 IPTGFSRELPSGWDYNRAASLQGGLIDNCFEGWDGLAMIEDPARGLRL--QMHTTDRSG- 267 +P G + + P GWD N+ S G LIDN + GW G A IE P GL L QM D G Sbjct: 191 LPVGHTAQFPEGWDLNQGISAHGTLIDNGYTGWGGQARIEWPEHGLALTAQMPDFDADGG 250 Query: 268 ----YVLMFRPNGLPYFCLEPVTHPIDAFHQPNQPGLIALAPGEDMVLLTRFTVCEIAQ 322 Y L++RP P FC EP+T PIDAFH P +PGL L+ GE +V+ + +A+ Sbjct: 251 SANHYCLIYRPPQGPAFCFEPITQPIDAFHLPGRPGLRVLSSGETLVMRVSWRFAALAR 309 >ref|YP_970612.1| aldose 1-epimerase [Acidovorax citrulli AAC00-1] gb|ABM32838.1| Aldose 1-epimerase [Acidovorax citrulli AAC00-1] Length = 356 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 127/286 (44%), Positives = 160/286 (55%), Gaps = 8/286 (2%) Query: 34 LQSGRQRLHVLPTLGGALAGWEWQ-RDRKWLPLLRPWSADPAALYATACFPLLPWSNRIT 92 L Q L ++P+LGG++A W+ D + L R W A LY A F ++PWSNRI+ Sbjct: 11 LHHAGQHLGLVPSLGGSVAAWQIDGPDGRRADLWRCWDGRTADLYRMASFAMVPWSNRIS 70 Query: 93 GGGFDFNGKHYPLSPNRPGEPYPIHGDSWRQAWTIVSQADDRMALELDSHRCDGNPYVYR 152 GGF G+ P+ PNR GEPYPIHGD W Q W++ A D + + L S R GNPY Y Sbjct: 71 CGGFFHAGRFRPMQPNRAGEPYPIHGDGWLQPWSLHQPAPDTLEMALHSDRFQGNPYHYE 130 Query: 153 ARQVLTLRENALEIELRVTNTGEETLPYGLGLHPYFLHDAQTRLQFRSRGVWLSGPDRIP 212 Q L L+ + V + G E LPYGLGLHP+F TR+ +GVWLSG D +P Sbjct: 131 CVQTFRLVPGGLDQSVVVRHLGSEPLPYGLGLHPWFPRTPDTRISAPVQGVWLSGSDPLP 190 Query: 213 TGFSRELPSGWDYNRAASLQGGLIDNCFEGWDGLAMIEDPARGLRLQMHTTD-------R 265 T + P GW+ N S GGLIDN + GW G A I P RGL+L D Sbjct: 191 TRHTEWFPEGWNLNGGISAHGGLIDNAYTGWGGTARIAWPERGLQLTARMPDFVQDGGVG 250 Query: 266 SGYVLMFRPNGLPYFCLEPVTHPIDAFHQPNQPGLIALAPGEDMVL 311 + L++RP P FC EP+T PIDAFHQP QPGL L G++ L Sbjct: 251 RHFCLVYRPPEGPAFCFEPITQPIDAFHQPGQPGLRVLERGQEFAL 296 >gb|EGH72818.1| aldose 1-epimerase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 289 Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats. Identities = 122/284 (42%), Positives = 160/284 (56%), Gaps = 15/284 (5%) Query: 33 TLQSGRQRLHVLPTLGGALAGWEWQRDRKWLPLLRPWSADPAALYA-----TACFPLLPW 87 TL+ G RL + P +GG++ W + PLLRP +D AL A AC+PL PW Sbjct: 7 TLEDGLTRLTLAPDIGGSIVNWSVLASGQ--PLLRP--SDEQALAAGTPRRLACYPLAPW 62 Query: 88 SNRITGGGFDFNGKHYPLSPNRPGEPYPIHGDSWRQAWTIVSQADDRMALELDSHRCDGN 147 SNRI GGFD L PN +P PIHG +W+Q WT++ Q+ +++ L+LDS Sbjct: 63 SNRIGNGGFDTPDGWLALKPNSANDPLPIHGSAWQQTWTVIEQSAEQVCLQLDSQ----T 118 Query: 148 PYVYRARQVLTLRENALEIELRVTNTGEETLPYGLGLHPYFLHDAQTRLQFRSRGVWLSG 207 P+ YRA+ TLRE L IEL T+ + +GLGLHPY A TRLQ R+ VWL Sbjct: 119 PFAYRAQLRYTLREGTLSIELTTTHQDSRAVWHGLGLHPYLPRTAHTRLQARAAQVWLCD 178 Query: 208 PDRIPTGFSRELPSGWDYNRAASLQGGLIDNCFEGWDGLAMIEDPARGLRLQMHTTDRSG 267 D +P ++LP+ WD+ +L +DN F GWDG ++I P G L T S Sbjct: 179 EDGLPRAL-QDLPAEWDFRHGNALPDTRLDNGFTGWDGQSIISQPDLGYELHCQATG-SE 236 Query: 268 YVLMFRPNGLPYFCLEPVTHPIDAFHQPNQPGLIALAPGEDMVL 311 Y L+F P GL +FC EPV+HP++A H P PGL L GE M L Sbjct: 237 YFLVFCPPGLDFFCFEPVSHPVNAHHLPGHPGLKLLRQGESMGL 280