BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0830.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774454.1| galactonate dehydratase [Herbaspirillum sero... 753 0.0 ref|YP_004355429.1| galactonate dehydratase [Pseudomonas brassic... 696 0.0 ref|ZP_07772658.1| galactonate dehydratase [Pseudomonas fluoresc... 696 0.0 ref|YP_349851.1| galactonate dehydratase [Pseudomonas fluorescen... 696 0.0 ref|YP_003981840.1| mandelate racemase/muconate lactonizing enzy... 684 0.0 >ref|YP_003774454.1| galactonate dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ62546.1| galactonate dehydratase [Herbaspirillum seropedicae SmR1] Length = 382 Score = 753 bits (1943), Expect = 0.0, Method: Composition-based stats. Identities = 371/382 (97%), Positives = 380/382 (99%) Query: 1 MKITKISTFIVPPRWCFLKIETDEGIVGWGEPIVEGRAHTVAAAVDELADYLVGKDPRNI 60 MKITKI+TFIVPPRWCFLKIETDEG+VGWGEPIVEGRAH+VAAAV+EL+DYL+GKDPRNI Sbjct: 1 MKITKITTFIVPPRWCFLKIETDEGVVGWGEPIVEGRAHSVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVPVHQLLGGAVRNSIRVYSWI 120 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGK LGVPVHQLLGGAVRNSIRVYSWI Sbjct: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKDLGVPVHQLLGGAVRNSIRVYSWI 120 Query: 121 GGDRPADTAAAAKNAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 GGDRPADTAAAAK+AVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI Sbjct: 121 GGDRPADTAAAAKSAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLIKELEPYKLMFIEEPVLSENSEALKEIAHLTSTPIALGERLYSR 240 GVDFHGRVHKPMAK LIKELEPYKLMFIEEPVLSEN+EALKEIAHLTSTPIALGERLYSR Sbjct: 181 GVDFHGRVHKPMAKALIKELEPYKLMFIEEPVLSENAEALKEIAHLTSTPIALGERLYSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD Sbjct: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 Query: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGVEINEEYVRQR 360 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLG+EINEEYVRQR Sbjct: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGIEINEEYVRQR 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 AEVGHRWRNPIWRHKDGSFAEW Sbjct: 361 AEVGHRWRNPIWRHKDGSFAEW 382 >ref|YP_004355429.1| galactonate dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70425.1| galactonate dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 382 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 328/382 (85%), Positives = 356/382 (93%) Query: 1 MKITKISTFIVPPRWCFLKIETDEGIVGWGEPIVEGRAHTVAAAVDELADYLVGKDPRNI 60 MKITK++TFIVPPRWCFLK+ETDEG+ GWGEP+VEGRAHTVAAAV+EL+DYL+GKDPRNI Sbjct: 1 MKITKLTTFIVPPRWCFLKVETDEGVTGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVPVHQLLGGAVRNSIRVYSWI 120 ED WTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGV V LLGG VR+ IRVYSWI Sbjct: 61 EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 120 Query: 121 GGDRPADTAAAAKNAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 GGDRPADTA AAK AVARGFTAVKMNGTEELQF+D+ +K++L LANV AVR+AVGPNVGI Sbjct: 121 GGDRPADTARAAKEAVARGFTAVKMNGTEELQFLDTFEKVDLALANVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLIKELEPYKLMFIEEPVLSENSEALKEIAHLTSTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+PYKLMFIEEPVLSEN EALKE+A LTSTPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDPYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALA+CLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 300 Query: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGVEINEEYVRQR 360 A YNAFIQEQSLGIHYNESNDLLDYI+D VF Y+ G+VKIP GPGLG+EINEEYV +R Sbjct: 301 AVCYNAFIQEQSLGIHYNESNDLLDYIKDPQVFDYDKGFVKIPNGPGLGIEINEEYVIER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A +GHRWRNPIWRH DGSFAEW Sbjct: 361 AAIGHRWRNPIWRHADGSFAEW 382 >ref|ZP_07772658.1| galactonate dehydratase [Pseudomonas fluorescens WH6] gb|EFQ66124.1| galactonate dehydratase [Pseudomonas fluorescens WH6] Length = 382 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 327/382 (85%), Positives = 356/382 (93%) Query: 1 MKITKISTFIVPPRWCFLKIETDEGIVGWGEPIVEGRAHTVAAAVDELADYLVGKDPRNI 60 MKITK++TFIVPPRWCFLK+ETD+G+ GWGEP+VEGRAHTVAAAV+EL+DYL+GKDPRNI Sbjct: 1 MKITKLTTFIVPPRWCFLKVETDQGVTGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVPVHQLLGGAVRNSIRVYSWI 120 ED WTVLYRGGFYRGGA+HMSALAGIDQALWDIKGKALGV V LLGG VR+ IRVYSWI Sbjct: 61 EDIWTVLYRGGFYRGGAVHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 120 Query: 121 GGDRPADTAAAAKNAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 GGDRPADTA AAK AVARGFTAVKMNGTEELQF+DS +K++L LANV AVR+AVGPNVGI Sbjct: 121 GGDRPADTARAAKEAVARGFTAVKMNGTEELQFVDSFEKVDLALANVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLIKELEPYKLMFIEEPVLSENSEALKEIAHLTSTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+PYKLMFIEEPVLSEN EALKE+A LTSTPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDPYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALA+CLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 300 Query: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGVEINEEYVRQR 360 A YNAFIQEQSLGIHYNESNDLLDY+RD VF Y+ G+VKIP GPGLG+EINEEYV +R Sbjct: 301 AVCYNAFIQEQSLGIHYNESNDLLDYVRDPGVFDYDQGFVKIPNGPGLGIEINEEYVIER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A +GHRWRNPIWRH DGSFAEW Sbjct: 361 AAIGHRWRNPIWRHADGSFAEW 382 >ref|YP_349851.1| galactonate dehydratase [Pseudomonas fluorescens Pf0-1] gb|ABA75860.1| galactonate dehydratase [Pseudomonas fluorescens Pf0-1] Length = 382 Score = 696 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 327/382 (85%), Positives = 355/382 (92%) Query: 1 MKITKISTFIVPPRWCFLKIETDEGIVGWGEPIVEGRAHTVAAAVDELADYLVGKDPRNI 60 MKITK++TFIVPPRWCFLK+ETDEG+ GWGEP+VEGRAHTVAAAV+EL+DYL+GKDPRNI Sbjct: 1 MKITKLTTFIVPPRWCFLKVETDEGVTGWGEPVVEGRAHTVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVPVHQLLGGAVRNSIRVYSWI 120 ED WTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGV V LLGG VR+ IRVYSWI Sbjct: 61 EDIWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVSVSDLLGGQVRDKIRVYSWI 120 Query: 121 GGDRPADTAAAAKNAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 GGDRPADTA AAK AV RGFTAVKMNGTEELQF+D+ +K++L LANV AVR+AVGPNVGI Sbjct: 121 GGDRPADTARAAKEAVGRGFTAVKMNGTEELQFLDTFEKVDLALANVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLIKELEPYKLMFIEEPVLSENSEALKEIAHLTSTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+PYKLMFIEEPVLSEN EALKE+A LTSTPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDPYKLMFIEEPVLSENYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALA+CLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDASHAGGITETRKIANMAEAYDVALALHCPLGPIALAACLQLD 300 Query: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGVEINEEYVRQR 360 A YNAFIQEQSLGIHYNESNDLLDY++D VF Y+ G+VKIP GPGLG+EINEEYV +R Sbjct: 301 AACYNAFIQEQSLGIHYNESNDLLDYVKDPRVFDYDKGFVKIPNGPGLGIEINEEYVIER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A VGHRWRNPIWRH DGSFAEW Sbjct: 361 AAVGHRWRNPIWRHADGSFAEW 382 >ref|YP_003981840.1| mandelate racemase/muconate lactonizing enzyme, N-terminal domain-containing protein 3 [Achromobacter xylosoxidans A8] gb|ADP19125.1| mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein 3 [Achromobacter xylosoxidans A8] Length = 382 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 329/382 (86%), Positives = 360/382 (94%) Query: 1 MKITKISTFIVPPRWCFLKIETDEGIVGWGEPIVEGRAHTVAAAVDELADYLVGKDPRNI 60 MKITK++T+IVPPRWCFLKIETDEGIVGWGEP+VEGRAH+VAAAV+EL+DYL+GKDPRNI Sbjct: 1 MKITKLTTYIVPPRWCFLKIETDEGIVGWGEPVVEGRAHSVAAAVEELSDYLIGKDPRNI 60 Query: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKALGVPVHQLLGGAVRNSIRVYSWI 120 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGK LGVPV QLLGG VR+ IRVYSWI Sbjct: 61 EDHWTVLYRGGFYRGGAIHMSALAGIDQALWDIKGKHLGVPVSQLLGGNVRDRIRVYSWI 120 Query: 121 GGDRPADTAAAAKNAVARGFTAVKMNGTEELQFIDSHDKIELTLANVQAVREAVGPNVGI 180 GGDRPADTAAAAK+AV RGFTAVKMNGTEELQ+IDS DK+E L NV AVR+AVGPNVGI Sbjct: 121 GGDRPADTAAAAKSAVERGFTAVKMNGTEELQYIDSFDKVEKCLENVAAVRDAVGPNVGI 180 Query: 181 GVDFHGRVHKPMAKVLIKELEPYKLMFIEEPVLSENSEALKEIAHLTSTPIALGERLYSR 240 GVDFHGRVHKPMAKVL+KEL+P+KLMFIEEPVLSE+ EALKE+A LTSTPIALGERL+SR Sbjct: 181 GVDFHGRVHKPMAKVLMKELDPFKLMFIEEPVLSEHYEALKELAPLTSTPIALGERLFSR 240 Query: 241 WDFKRILSEGYVDIIQPDVSHAGGITETRKIAMMAEAYDVALALHCPLGPIALASCLQVD 300 WDFKR+LSEGYVDIIQPD SHAGGITETRKIA MAEAYDVALALHCPLGPIALA+CLQ+D Sbjct: 241 WDFKRVLSEGYVDIIQPDPSHAGGITETRKIAAMAEAYDVALALHCPLGPIALATCLQID 300 Query: 301 AGSYNAFIQEQSLGIHYNESNDLLDYIRDKNVFAYEDGYVKIPQGPGLGVEINEEYVRQR 360 AG YNAFIQEQSLGIHYN +NDLLDY+ ++ VFAYEDG V IPQGPGLG+E+NEEYV++R Sbjct: 301 AGCYNAFIQEQSLGIHYNAANDLLDYVSNREVFAYEDGMVAIPQGPGLGIEVNEEYVKER 360 Query: 361 AEVGHRWRNPIWRHKDGSFAEW 382 A VGHRWRNP+WRH DGSFAEW Sbjct: 361 AAVGHRWRNPVWRHADGSFAEW 382