BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0827.p (204 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_158433.1| hypothetical protein ebA2499 [Aromatoleum aroma... 258 5e-67 ref|YP_560124.1| hypothetical protein Bxe_A0866 [Burkholderia xe... 255 2e-66 gb|EFV85939.1| hypothetical protein HMPREF0005_01349 [Achromobac... 254 5e-66 ref|ZP_02482240.1| hypothetical protein Bpse7_13893 [Burkholderi... 253 1e-65 ref|ZP_02490433.1| hypothetical protein BpseN_13286 [Burkholderi... 253 1e-65 >ref|YP_158433.1| hypothetical protein ebA2499 [Aromatoleum aromaticum EbN1] emb|CAI07532.1| hypothetical protein ebA2499 [Aromatoleum aromaticum EbN1] Length = 289 Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats. Identities = 129/172 (75%), Positives = 145/172 (84%) Query: 1 MEKLTPGEPQSATDYDDRTSTAVKKVLIEIGQILGSFKGKFAIVGGAVPWLLLGNDDMPH 60 M K+TP EPQSA +YDDRT+ AVK VLIEIGQILGSFKGKFAI+GGAVPWLLL N+DMPH Sbjct: 1 MAKMTPHEPQSAAEYDDRTTAAVKSVLIEIGQILGSFKGKFAIIGGAVPWLLLANEDMPH 60 Query: 61 VGTVDVDLSLDAEALGDGEYATLVEALQEHGYQQRRDLRRFQLLRQVPTEDEGASIDIIV 120 VGT+DVD+ LDAEALGDGEYATL+ ALQ HGY QR LRRFQL+RQV D G +ID++V Sbjct: 61 VGTLDVDVGLDAEALGDGEYATLIGALQGHGYAQREGLRRFQLVRQVTARDGGEAIDVVV 120 Query: 121 DFLMPRDAEIVKNVPPLISDFAVQRADGADLALRFYQWGGVPGRRHQSGRDR 172 DFLMPRDAEIVKN PPLI+DFAVQRADGADLA+RFYQ V G + G +R Sbjct: 121 DFLMPRDAEIVKNDPPLINDFAVQRADGADLAMRFYQLVAVAGPMPEGGTNR 172 >ref|YP_560124.1| hypothetical protein Bxe_A0866 [Burkholderia xenovorans LB400] gb|ABE32072.1| hypothetical protein Bxe_A0866 [Burkholderia xenovorans LB400] Length = 290 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 130/173 (75%), Positives = 145/173 (83%), Gaps = 1/173 (0%) Query: 1 MEKLTPG-EPQSATDYDDRTSTAVKKVLIEIGQILGSFKGKFAIVGGAVPWLLLGNDDMP 59 M ++TP EPQSA +YDDRT+ AVK VLIEIGQILGSFKGKFAI+GGAVPWLLL N+DMP Sbjct: 1 MAQMTPSQEPQSAAEYDDRTTAAVKSVLIEIGQILGSFKGKFAIIGGAVPWLLLANEDMP 60 Query: 60 HVGTVDVDLSLDAEALGDGEYATLVEALQEHGYQQRRDLRRFQLLRQVPTEDEGASIDII 119 HVGT+DVD+ LDAEALGDGEYATLV ALQ HGY QR LRRFQL+RQVP D G +ID++ Sbjct: 61 HVGTLDVDVGLDAEALGDGEYATLVGALQGHGYAQREGLRRFQLVRQVPARDGGEAIDVV 120 Query: 120 VDFLMPRDAEIVKNVPPLISDFAVQRADGADLALRFYQWGGVPGRRHQSGRDR 172 VDFLMPRDAEIV+N PPLISDFAVQRADGADLA+RFYQ V G G +R Sbjct: 121 VDFLMPRDAEIVRNNPPLISDFAVQRADGADLAMRFYQLVAVAGSMPDGGTNR 173 >gb|EFV85939.1| hypothetical protein HMPREF0005_01349 [Achromobacter xylosoxidans C54] Length = 290 Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats. Identities = 127/173 (73%), Positives = 144/173 (83%), Gaps = 1/173 (0%) Query: 1 MEKLTPG-EPQSATDYDDRTSTAVKKVLIEIGQILGSFKGKFAIVGGAVPWLLLGNDDMP 59 M ++ P EPQSA +YDDRT+ AVK VLIEIGQILGSFKGKFAI+GGAVPWLLL N+DMP Sbjct: 1 MAQMKPSQEPQSAAEYDDRTTAAVKSVLIEIGQILGSFKGKFAIIGGAVPWLLLANEDMP 60 Query: 60 HVGTVDVDLSLDAEALGDGEYATLVEALQEHGYQQRRDLRRFQLLRQVPTEDEGASIDII 119 HVGT+DVD+ LDAE LGDGEYATL+ ALQ HGY QR LRRFQL+RQVP D+G +IDI+ Sbjct: 61 HVGTLDVDVGLDAETLGDGEYATLIGALQSHGYTQRDGLRRFQLVRQVPARDDGEAIDIV 120 Query: 120 VDFLMPRDAEIVKNVPPLISDFAVQRADGADLALRFYQWGGVPGRRHQSGRDR 172 +DFLMPRDAEIVKN PPLISDFAVQRADGADLA+RFY+ V G G +R Sbjct: 121 IDFLMPRDAEIVKNTPPLISDFAVQRADGADLAMRFYRLVAVEGPMPDGGTNR 173 >ref|ZP_02482240.1| hypothetical protein Bpse7_13893 [Burkholderia pseudomallei 7894] Length = 287 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 128/169 (75%), Positives = 141/169 (83%) Query: 4 LTPGEPQSATDYDDRTSTAVKKVLIEIGQILGSFKGKFAIVGGAVPWLLLGNDDMPHVGT 63 + P EPQSA +YDDRT+ AVK VLIEIGQILGSFKGKFAIVGGAVPWLLL ++DMPHVGT Sbjct: 2 IPPQEPQSAAEYDDRTTAAVKSVLIEIGQILGSFKGKFAIVGGAVPWLLLASEDMPHVGT 61 Query: 64 VDVDLSLDAEALGDGEYATLVEALQEHGYQQRRDLRRFQLLRQVPTEDEGASIDIIVDFL 123 DVD+ LDAEALGDGEYATL+ ALQ HGY QR LRRFQL+RQVP D G +ID++VDFL Sbjct: 62 FDVDVGLDAEALGDGEYATLIGALQGHGYAQRDGLRRFQLVRQVPARDGGEAIDVVVDFL 121 Query: 124 MPRDAEIVKNVPPLISDFAVQRADGADLALRFYQWGGVPGRRHQSGRDR 172 MPRDAEIVKN PPLISDFAVQRADGADLA+RFYQ V G G +R Sbjct: 122 MPRDAEIVKNDPPLISDFAVQRADGADLAMRFYQLVAVTGAMPDGGTNR 170 >ref|ZP_02490433.1| hypothetical protein BpseN_13286 [Burkholderia pseudomallei NCTC 13177] ref|ZP_04964695.1| conserved hypothetical protein [Burkholderia pseudomallei 406e] gb|EDO85118.1| conserved hypothetical protein [Burkholderia pseudomallei 406e] Length = 290 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 128/171 (74%), Positives = 142/171 (83%) Query: 2 EKLTPGEPQSATDYDDRTSTAVKKVLIEIGQILGSFKGKFAIVGGAVPWLLLGNDDMPHV 61 + + P EPQSA +YDDRT+ AVK VLIEIGQILGSFKGKFAIVGGAVPWLLL ++DMPHV Sbjct: 3 QMIPPQEPQSAAEYDDRTTAAVKSVLIEIGQILGSFKGKFAIVGGAVPWLLLASEDMPHV 62 Query: 62 GTVDVDLSLDAEALGDGEYATLVEALQEHGYQQRRDLRRFQLLRQVPTEDEGASIDIIVD 121 GT DVD+ LDAEALGDGEYATL+ ALQ HGY QR LRRFQL+RQVP D G +ID++VD Sbjct: 63 GTFDVDVGLDAEALGDGEYATLIGALQGHGYAQRDGLRRFQLVRQVPARDGGEAIDVVVD 122 Query: 122 FLMPRDAEIVKNVPPLISDFAVQRADGADLALRFYQWGGVPGRRHQSGRDR 172 FLMPRDAEIVKN PPLISDFAVQRADGADLA+RFYQ V G G +R Sbjct: 123 FLMPRDAEIVKNDPPLISDFAVQRADGADLAMRFYQLVAVTGAMPDGGTNR 173