BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0813.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004235670.1| hypothetical protein Acav_3201 [Acidovorax a... 226 1e-57 ref|YP_970319.1| hypothetical protein Aave_1961 [Acidovorax citr... 223 7e-57 ref|YP_001099169.1| hypothetical protein HEAR0855 [Herminiimonas... 218 3e-55 ref|ZP_07262960.1| hypothetical protein Psyrps6_08072 [Pseudomon... 211 5e-53 ref|YP_001790305.1| hypothetical protein Lcho_1271 [Leptothrix c... 211 6e-53 >ref|YP_004235670.1| hypothetical protein Acav_3201 [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47103.1| Protein of unknown function DUF3455 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 182 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 131/182 (71%), Positives = 145/182 (79%), Gaps = 6/182 (3%) Query: 11 LRIALPLA--AALTLAACAPMST----MYSQDSLPDAVKVPAGNKVVLQTVGVGEILYEC 64 +RI LPLA A L LAAC+ M + +SQ SLP AV+VPAG+KV L+TVG GEI YEC Sbjct: 1 MRIHLPLAIVATLGLAACSHMGSSPMAAFSQASLPAAVQVPAGHKVALETVGKGEITYEC 60 Query: 65 RAKKDMPGQFEWTFVGPDAVLKDRSGMQVGRYYGPPATWESSDGSKVTGAQVAVAPAGTG 124 RAKKDMPG FEW FVGPDA L+DR G VGRY+GPPATWES+DGSKVT QVAVAPAGTG Sbjct: 61 RAKKDMPGDFEWVFVGPDAKLQDRKGAMVGRYWGPPATWESNDGSKVTATQVAVAPAGTG 120 Query: 125 NIPHQLVKANPATGMGAMTQTTYIQRVATKGGVAPADRCDMGSAGAKQKVGYQADYIFWK 184 NIP QLVKANPATGMGAM YIQRVAT+GGVAPA C G+AG KQ V YQADYIFW+ Sbjct: 121 NIPLQLVKANPATGMGAMQGVAYIQRVATQGGVAPAMPCAAGNAGQKQIVKYQADYIFWR 180 Query: 185 AS 186 A+ Sbjct: 181 AA 182 >ref|YP_970319.1| hypothetical protein Aave_1961 [Acidovorax citrulli AAC00-1] gb|ABM32545.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1] Length = 182 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 131/182 (71%), Positives = 143/182 (78%), Gaps = 6/182 (3%) Query: 11 LRIALPLA--AALTLAACAPMSTM----YSQDSLPDAVKVPAGNKVVLQTVGVGEILYEC 64 +RI LPLA A L LAAC+ M + +SQ SLP AV+VPAG+KV L+TVG GEI YEC Sbjct: 1 MRIHLPLAIVATLGLAACSHMGSAPMGAFSQASLPAAVQVPAGHKVALETVGKGEITYEC 60 Query: 65 RAKKDMPGQFEWTFVGPDAVLKDRSGMQVGRYYGPPATWESSDGSKVTGAQVAVAPAGTG 124 RAKKDM G FEW FVGPDA L DR G VGRY+GPPATWESSDGSKVT QVAVAPAGTG Sbjct: 61 RAKKDMAGDFEWVFVGPDAKLHDRRGAVVGRYWGPPATWESSDGSKVTATQVAVAPAGTG 120 Query: 125 NIPHQLVKANPATGMGAMTQTTYIQRVATKGGVAPADRCDMGSAGAKQKVGYQADYIFWK 184 NIP QLVKANPATGMGAM YIQRVAT+GGVAPA C G+AG KQ V YQADYIFW+ Sbjct: 121 NIPLQLVKANPATGMGAMQGVAYIQRVATQGGVAPAMPCAAGNAGQKQIVKYQADYIFWR 180 Query: 185 AS 186 A+ Sbjct: 181 AA 182 >ref|YP_001099169.1| hypothetical protein HEAR0855 [Herminiimonas arsenicoxydans] emb|CAL61042.1| conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 183 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 117/167 (70%), Positives = 134/167 (80%), Gaps = 3/167 (1%) Query: 23 LAACAPMS---TMYSQDSLPDAVKVPAGNKVVLQTVGVGEILYECRAKKDMPGQFEWTFV 79 L AC+ +MYSQD+LP V+VPAG+++ +QTVG G+I YECR KKDM GQFEW FV Sbjct: 17 LTACSTTPTTTSMYSQDALPPTVQVPAGHRIAMQTVGAGDITYECRVKKDMAGQFEWVFV 76 Query: 80 GPDAVLKDRSGMQVGRYYGPPATWESSDGSKVTGAQVAVAPAGTGNIPHQLVKANPATGM 139 GPDAVL DRSG VG+Y+GPPATW S+DGSKVT Q+AVAPAG GNIP QLVKANPA G Sbjct: 77 GPDAVLSDRSGKAVGKYFGPPATWASNDGSKVTATQLAVAPAGAGNIPFQLVKANPAMGS 136 Query: 140 GAMTQTTYIQRVATKGGVAPADRCDMGSAGAKQKVGYQADYIFWKAS 186 GAMT TYIQRVATKGGVAPA C G+AG+K+ V YQADYIFWKA+ Sbjct: 137 GAMTGVTYIQRVATKGGVAPASTCSAGNAGSKEVVKYQADYIFWKAA 183 >ref|ZP_07262960.1| hypothetical protein Psyrps6_08072 [Pseudomonas syringae pv. syringae 642] Length = 177 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 112/168 (66%), Positives = 128/168 (76%) Query: 19 AALTLAACAPMSTMYSQDSLPDAVKVPAGNKVVLQTVGVGEILYECRAKKDMPGQFEWTF 78 A TLA S +Q LP++V+VPAGNKV +QT GVGEI YECRAK +MP + EW F Sbjct: 10 AGTTLAFTCLSSVAMAQTDLPESVRVPAGNKVSMQTTGVGEITYECRAKANMPNEMEWAF 69 Query: 79 VGPDAVLKDRSGMQVGRYYGPPATWESSDGSKVTGAQVAVAPAGTGNIPHQLVKANPATG 138 VGP AVL D+SG QVG YYGPPATWE+ DGSK+TG QVAVAP+ TGN+P+QLVKANPA G Sbjct: 70 VGPKAVLNDKSGKQVGTYYGPPATWEAKDGSKITGTQVAVAPSSTGNLPYQLVKANPAEG 129 Query: 139 MGAMTQTTYIQRVATKGGVAPADRCDMGSAGAKQKVGYQADYIFWKAS 186 GAMT TYIQRVA KGGVAPA C + GAK+ V YQADY+FW AS Sbjct: 130 KGAMTGVTYIQRVALKGGVAPAKACAESNKGAKEVVKYQADYLFWTAS 177 >ref|YP_001790305.1| hypothetical protein Lcho_1271 [Leptothrix cholodnii SP-6] gb|ACB33540.1| conserved hypothetical protein [Leptothrix cholodnii SP-6] Length = 194 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 111/163 (68%), Positives = 126/163 (77%) Query: 23 LAACAPMSTMYSQDSLPDAVKVPAGNKVVLQTVGVGEILYECRAKKDMPGQFEWTFVGPD 82 + + PM++ +SQDSLPD +KVPAG+KV ++TVG G+I YECR K D GQ W FVGPD Sbjct: 31 MPSMKPMASTFSQDSLPDTIKVPAGHKVAMETVGAGDITYECREKADAAGQTAWVFVGPD 90 Query: 83 AVLKDRSGMQVGRYYGPPATWESSDGSKVTGAQVAVAPAGTGNIPHQLVKANPATGMGAM 142 A L DRSG QVGRY+GPPATWES DGSKVT Q+AVAPAG GN+P QLVKANPA GMGAM Sbjct: 91 AKLMDRSGKQVGRYFGPPATWESMDGSKVTATQLAVAPAGAGNLPLQLVKANPAMGMGAM 150 Query: 143 TQTTYIQRVATKGGVAPADRCDMGSAGAKQKVGYQADYIFWKA 185 T+IQRVA KGGVAPA C M + G KQ V YQADYIFW A Sbjct: 151 NGVTHIQRVALKGGVAPASACTMANKGEKQTVRYQADYIFWTA 193