BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0802.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06495629.1| hypothetical protein PsyrpsF_15844 [Pseudomon...   110   6e-23
emb|CAQ36957.1| hypothetical protein RSMK03251 [Ralstonia solana...   108   2e-22
gb|EGH42526.1| hypothetical protein PSYPI_08965 [Pseudomonas syr...   101   3e-20
ref|YP_003041826.1| hypothetical protein PAU_02996 [Photorhabdus...    86   3e-15
ref|YP_003040004.1| hypothetical protein PAU_01167 [Photorhabdus...    63   1e-08

>ref|ZP_06495629.1| hypothetical protein PsyrpsF_15844 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 152

 Score =  110 bits (275), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 52/145 (35%), Positives = 86/145 (59%)

Query: 7   EFIAVIGKMERAHEVQALFKKLPDQPLISSTPEEYNDPVSATTYYQFFETGVECGFRSGI 66
           +F+  +G+ E    V  L +++ + P +S TP+ YNDP   T +Y+F ++G+E GFRSG 
Sbjct: 6   DFVRALGQDESGGIVTDLCRRVGELPAVSETPDNYNDPEGKTRFYKFIKSGIEIGFRSGK 65

Query: 67  FSFAHFLIQGNEEYKSYQGKLAGFDTASLDHNAVKAHWGRPQQHGGGYLDSLIGFVRPWM 126
            +  HFL+Q +E Y +Y+  + G    +     V A  G P +   G +D LIG+V+ W+
Sbjct: 66  LNHIHFLVQPHEGYSAYKEDVLGRIAQAWRVEDVIAELGSPSKEAPGRVDMLIGYVQQWL 125

Query: 127 RYEMPDHLVRFEFSDDMRVYAVTLM 151
           +YE   + +R EFS+D R++  TL+
Sbjct: 126 KYEFKTYALRMEFSEDGRLWKATLI 150


>emb|CAQ36957.1| hypothetical protein RSMK03251 [Ralstonia solanacearum MolK2]
          Length = 152

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/147 (35%), Positives = 83/147 (56%)

Query: 5   LEEFIAVIGKMERAHEVQALFKKLPDQPLISSTPEEYNDPVSATTYYQFFETGVECGFRS 64
           LE+FI V+G  + +  + AL   + + P+IS TP ++NDPV  T YY+F  +G+E GFR 
Sbjct: 4   LEQFIDVLGLSKDSERMSALMTAIGEAPVISRTPADFNDPVGETEYYKFINSGIEIGFRG 63

Query: 65  GIFSFAHFLIQGNEEYKSYQGKLAGFDTASLDHNAVKAHWGRPQQHGGGYLDSLIGFVRP 124
            + +  H  +Q +E Y  Y+G L G     +    V  + G     GGG +D LIG++  
Sbjct: 64  EVLNHLHLYVQEHEGYGMYKGDLFGMPAQGVSEADVLRNLGNQDAQGGGKMDMLIGYIHK 123

Query: 125 WMRYEMPDHLVRFEFSDDMRVYAVTLM 151
           W+RY+     +R EFS++  +  ++LM
Sbjct: 124 WIRYDRQGFALRAEFSENKGLRKLSLM 150


>gb|EGH42526.1| hypothetical protein PSYPI_08965 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 123

 Score =  101 bits (252), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/120 (39%), Positives = 73/120 (60%)

Query: 32  PLISSTPEEYNDPVSATTYYQFFETGVECGFRSGIFSFAHFLIQGNEEYKSYQGKLAGFD 91
           P +S TP+ YNDP   T +Y+F ++G+E GFRSG  +  HFL+Q +E Y +Y+  + G  
Sbjct: 2   PAVSETPDNYNDPEGKTRFYKFIKSGIEIGFRSGKLNHIHFLVQPHEGYSAYKEDVLGRI 61

Query: 92  TASLDHNAVKAHWGRPQQHGGGYLDSLIGFVRPWMRYEMPDHLVRFEFSDDMRVYAVTLM 151
             +     V A  G P +   G +D LIG+V+ W++YE   + +R EFS+D R++  TL+
Sbjct: 62  AQAWRVEDVIAELGSPSKEAPGRVDMLIGYVQQWLKYEFKTYALRMEFSEDGRLWKATLI 121


>ref|YP_003041826.1| hypothetical protein PAU_02996 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 emb|CAR67578.1| Hypothetical Protein PA-RVA15-17-1009 [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 emb|CAQ85084.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 157

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 2/146 (1%)

Query: 7   EFIAVIGKMERAHEVQALFKKLPDQPLISSTPEEYNDPVSATTYYQFFETGVECGFRSGI 66
           +FI  +G  E + +   L   + +   +   P EYNDP+  T YY++  +G+E GFR  +
Sbjct: 6   QFINALGTTEVSKKFYDLNLAIEENAQLYEDPSEYNDPIGHTKYYKYPHSGLEIGFRKDV 65

Query: 67  FSFAHFLIQGNEEYKSYQGKLA-GFDTASLDHNAVKAHWGRPQQHGGGYLDSLIGFVRPW 125
            +  HF    NE Y  ++G L  G ++   +   ++A  G P  +GGG +D L+G++  W
Sbjct: 66  LNHIHFYFNENEGYSIFKGNLMFGINSEWSEIEIIQA-LGEPSTNGGGKIDILLGYINRW 124

Query: 126 MRYEMPDHLVRFEFSDDMRVYAVTLM 151
           ++YE   + +  +F  +  +Y  TLM
Sbjct: 125 IKYENEKYALHLQFDQNNFLYQATLM 150


>ref|YP_003040004.1| hypothetical protein PAU_01167 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 emb|CAR66656.1| Hypothetical protein PA-RVA2-4318 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 emb|CAQ83259.1| Hypothetical protein PAU_01167 [Photorhabdus asymbiotica]
          Length = 136

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 8/133 (6%)

Query: 21  VQALFKKLPDQPLISSTPEEYNDPVSATTYYQFFETGVECGFRSGIFSFAHFLIQGNEEY 80
           V  +F  LP    I   P    D +    YY FF+ G+     + + +   F ++  E +
Sbjct: 7   VNNIFVLLPQD--IGELPVVTTDMLGKRIYYSFFQAGILFLLENDLVTQITFFMKPEEGF 64

Query: 81  KSYQGKLA---GFDTASLDHNAVKAHWGRPQQHGGGYLDSLIGFVRPWMRYEMPDHLVRF 137
             YQG+L    G D    D   VK   G+P   GGG  D L+G++  W++YE  D+ +  
Sbjct: 65  SIYQGELPPGIGIDNKEKDVVEVK---GKPPASGGGKPDMLLGYINRWIKYESNDYALHM 121

Query: 138 EFSDDMRVYAVTL 150
           EF+ D R+  ++L
Sbjct: 122 EFAQDGRLAKISL 134