BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0799.p         (161 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003943824.1| hypothetical protein Entcl_4309 [Enterobacte...    89   2e-16
ref|YP_003335513.1| hypothetical protein Dd586_3981 [Dickeya dad...    70   1e-10
ref|ZP_04630410.1| hypothetical protein yberc0001_39950 [Yersini...    68   4e-10
ref|ZP_04621944.1| hypothetical protein yaldo0001_39520 [Yersini...    67   1e-09

>ref|YP_003943824.1| hypothetical protein Entcl_4309 [Enterobacter cloacae SCF1]
 gb|ADO50540.1| hypothetical protein Entcl_4309 [Enterobacter cloacae SCF1]
          Length = 147

 Score = 89.0 bits (219), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/114 (40%), Positives = 64/114 (56%)

Query: 38  ILKAQWETAEFRAWISENLSRILREPFPRFFGQDGSIAKGISSFYDSVNPEDDDLIDSAF 97
           I + +   +E   W  EN   I     P   G  GS+A+ I  FY+SV+ E+D+++DS F
Sbjct: 33  IFQGKVNLSELLDWFKENEHEIKSSDLPIDRGNGGSLARKIRDFYESVDTENDEVVDSMF 92

Query: 98  DYRRAHGLRFGLRGALIQDIYVGQRYGNLEISSYSEKDKWSYFIYADSFENEMK 151
           DYR  H LRF +RG LI +IY+G+   N EIS      +W YFI  + F N+ K
Sbjct: 93  DYRSHHCLRFAVRGTLIPEIYIGKSGHNYEISMSGNDGEWGYFIDIEDFFNQFK 146


>ref|YP_003335513.1| hypothetical protein Dd586_3981 [Dickeya dadantii Ech586]
 gb|ACZ78807.1| hypothetical protein Dd586_3981 [Dickeya dadantii Ech586]
          Length = 149

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/129 (31%), Positives = 71/129 (55%)

Query: 25  IEFLLMDGKDVRRILKAQWETAEFRAWISENLSRILREPFPRFFGQDGSIAKGISSFYDS 84
           I+  + +   ++ + K + +      W  +N   I     P  +  D SIA+GI S Y++
Sbjct: 20  IDLTMEENGSLKSLFKGRVDFQLLIEWFLDNEEDIKSLEIPVGYLTDTSIAEGIHSIYEN 79

Query: 85  VNPEDDDLIDSAFDYRRAHGLRFGLRGALIQDIYVGQRYGNLEISSYSEKDKWSYFIYAD 144
           ++ ++D+++D  FDYR +H LRF  RG    +IY+G+     EIS ++E ++W YF   D
Sbjct: 80  LDVDNDEVVDKMFDYRSSHCLRFASRGTDFPEIYIGKNGVRYEISIFNECEQWRYFFDID 139

Query: 145 SFENEMKKL 153
            F +E+K L
Sbjct: 140 DFFDELKLL 148


>ref|ZP_04630410.1| hypothetical protein yberc0001_39950 [Yersinia bercovieri ATCC
           43970]
 gb|EEQ04696.1| hypothetical protein yberc0001_39950 [Yersinia bercovieri ATCC
           43970]
          Length = 152

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/94 (39%), Positives = 49/94 (52%)

Query: 48  FRAWISENLSRILREPFPRFFGQDGSIAKGISSFYDSVNPEDDDLIDSAFDYRRAHGLRF 107
           F  WI +N   I     P      GS+A  I  FY+S   E+D + D+ FDYR +H LRF
Sbjct: 43  FIEWIYDNEYEIKTSELPIDTTDSGSLAYKIWHFYESEEIENDIIADAMFDYRASHCLRF 102

Query: 108 GLRGALIQDIYVGQRYGNLEISSYSEKDKWSYFI 141
             RG    +IY+G+     EIS ++  D W YFI
Sbjct: 103 AARGTDFPEIYIGKLGCKHEISMFTSNDSWQYFI 136


>ref|ZP_04621944.1| hypothetical protein yaldo0001_39520 [Yersinia aldovae ATCC 35236]
 gb|EEP93555.1| hypothetical protein yaldo0001_39520 [Yersinia aldovae ATCC 35236]
          Length = 152

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/94 (38%), Positives = 49/94 (52%)

Query: 48  FRAWISENLSRILREPFPRFFGQDGSIAKGISSFYDSVNPEDDDLIDSAFDYRRAHGLRF 107
           F  W+ +N   I     P      GS+A  I  FY+S   E+D + D+ FDYR +H LRF
Sbjct: 43  FIEWLFDNEYEIKTSELPINTTDSGSLAYKIWHFYESEEIENDIIADAMFDYRASHCLRF 102

Query: 108 GLRGALIQDIYVGQRYGNLEISSYSEKDKWSYFI 141
             RG    +IY+G+     EIS ++  D W YFI
Sbjct: 103 AARGTDFPEIYIGKLGCKHEISMFTSNDSWQYFI 136