BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0793.p         (172 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EGH61772.1| hypothetical protein PMA4326_23481 [Pseudomonas s...   108   4e-22
ref|ZP_06495631.1| hypothetical protein PsyrpsF_15854 [Pseudomon...   106   1e-21
gb|EGH96668.1| hypothetical protein PLA106_11306 [Pseudomonas sy...   100   1e-19

>gb|EGH61772.1| hypothetical protein PMA4326_23481 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 170

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 4/163 (2%)

Query: 11  DLKQKVEALSDEAEPHATLTVLLRWIESRQEKMMSPPFSDYGLDKFSQFRLEDYPVSKSS 70
           + +  VE LSDE      L V+L W+ S ++ +   PFS YG D  ++    + PV  SS
Sbjct: 11  EFQSVVETLSDETPSRQVLEVILFWVRSNRKHLTGEPFSVYGFDSLAKIDEREIPVEYSS 70

Query: 71  LRGRELEHFRRTVSKLSLKDLAFAAMFIRDSLEALLMPEVDGECPGCNGYSIAVFKNKCD 130
            +  +L +F+  V K   +D+   A F+RD++E L   EVD +CP C    +  F  K +
Sbjct: 71  FKVSDLINFKSIVLKRQARDVDSIARFLRDTIEELATVEVDEQCPRCESEGMRAFIGKYN 130

Query: 131 GKLLLLCKTCGFGWYFDAAQ-DTGGKREYEFATERELREYGLV 172
           G L   C  CG+  Y D ++ + GG    EFA+ER+LRE GL+
Sbjct: 131 GLLAYQCNVCGYSHYSDGSRVENGG---LEFASERQLRELGLI 170


>ref|ZP_06495631.1| hypothetical protein PsyrpsF_15854 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 170

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 4/163 (2%)

Query: 11  DLKQKVEALSDEAEPHATLTVLLRWIESRQEKMMSPPFSDYGLDKFSQFRLEDYPVSKSS 70
           + +  VE LSDE      L V+L W+ S ++ +   PFS YG D  ++    + PV  SS
Sbjct: 11  EFQSVVETLSDETPSRQVLEVILFWMRSNRKYLTGEPFSVYGFDSLAKIDEREIPVEYSS 70

Query: 71  LRGRELEHFRRTVSKLSLKDLAFAAMFIRDSLEALLMPEVDGECPGCNGYSIAVFKNKCD 130
            +  +L +F+  V K   +D+   A F+RD++E L   EVD +CP C    +  F  K +
Sbjct: 71  FKVSDLINFKSIVLKRQARDVDSIARFLRDTIEELATVEVDEQCPRCESEGMRAFIGKYN 130

Query: 131 GKLLLLCKTCGFGWYFDAAQ-DTGGKREYEFATERELREYGLV 172
           G L   C  CG+  Y D ++ + GG    EFA+ER+LRE GL+
Sbjct: 131 GLLAYQCNVCGYSNYSDGSRVENGG---LEFASERQLRELGLI 170


>gb|EGH96668.1| hypothetical protein PLA106_11306 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 170

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 4/173 (2%)

Query: 1   MKALTNSDLRDLKQKVEALSDEAEPHATLTVLLRWIESRQEKMMSPPFSDYGLDKFSQFR 60
           M+ L      + +  V  LSD+      L V+L WI+S  + +   PFS YG D F++  
Sbjct: 1   MRTLPIRIWHEFQSVVATLSDDTPFRKVLEVILFWIKSNYKYLDGEPFSVYGFDCFAKVD 60

Query: 61  LEDYPVSKSSLRGRELEHFRRTVSKLSLKDLAFAAMFIRDSLEALLMPEVDGECPGCNGY 120
             + PV  SS    +L +F+  V K   +D+   A  +RD++E L   EVD +CP C   
Sbjct: 61  EREIPVEYSSFNLSDLINFKSVVFKRQARDVESIARLLRDTVEELATVEVDEQCPKCESE 120

Query: 121 SIAVFKNKCDGKLLLLCKTCGFGWYFDAAQ-DTGGKREYEFATERELREYGLV 172
            + VF  K +G L   C  CG+  Y D ++ + GG    E A+ER+LRE GL+
Sbjct: 121 GMRVFIGKHNGLLAYQCNVCGYSHYSDGSRVEIGG---LELASERQLRELGLI 170