BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0792.p         (119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001065410.1| hypothetical protein BURPS1106A_1130 [Burkho...    77   1e-12
ref|ZP_04897244.1| hypothetical protein BURPSPAST_A1095 [Burkhol...    75   3e-12
ref|ZP_07796497.1| hypothetical protein PA39016_002500001 [Pseud...    62   2e-08
ref|ZP_04934217.1| conserved hypothetical protein [Pseudomonas a...    62   3e-08

>ref|YP_001065410.1| hypothetical protein BURPS1106A_1130 [Burkholderia pseudomallei
           1106a]
 ref|ZP_02417373.1| hypothetical protein Bpse14_41395 [Burkholderia pseudomallei 14]
 ref|ZP_02470326.1| hypothetical protein BpseB_05963 [Burkholderia pseudomallei B7210]
 ref|ZP_02497138.1| hypothetical protein Bpse112_06116 [Burkholderia pseudomallei 112]
 ref|ZP_04814368.1| hypothetical protein BURPS1106B_A0385 [Burkholderia pseudomallei
           1106b]
 ref|ZP_04952999.1| hypothetical protein BURPS1710A_1418 [Burkholderia pseudomallei
           1710a]
 gb|ABN88807.1| hypothetical protein BURPS1106A_1130 [Burkholderia pseudomallei
           1106a]
 gb|EES24993.1| hypothetical protein BURPS1106B_A0385 [Burkholderia pseudomallei
           1106b]
 gb|EET10018.1| hypothetical protein BURPS1710A_1418 [Burkholderia pseudomallei
           1710a]
          Length = 79

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/75 (52%), Positives = 51/75 (68%)

Query: 45  VDYSFEDGFERPIEDLMWRVILLILSGGWYVEFVERNRALIADLIVENGLQNMLSDLPLE 104
           V  +FEDGF+R IE+LMW VI+ ILSGG + +  +  +  I D I   GL N+L  +P E
Sbjct: 4   VSSAFEDGFDRDIENLMWNVIIFILSGGMHPDVEDGIKRAILDKIYSIGLNNLLQGVPAE 63

Query: 105 EAEIFEHDLKILKLI 119
           EAE+F HDL+ILK I
Sbjct: 64  EAELFRHDLRILKFI 78


>ref|ZP_04897244.1| hypothetical protein BURPSPAST_A1095 [Burkholderia pseudomallei
           Pasteur 52237]
 gb|EDO94082.1| hypothetical protein BURPSPAST_A1095 [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 76

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 50/72 (69%)

Query: 48  SFEDGFERPIEDLMWRVILLILSGGWYVEFVERNRALIADLIVENGLQNMLSDLPLEEAE 107
           +FEDGF+R IE+LMW VI+ ILSGG + +  +  +  I D I   GL N+L  +P EEAE
Sbjct: 4   AFEDGFDRDIENLMWNVIIFILSGGMHPDVEDGIKRAILDKIYSIGLNNLLQGVPAEEAE 63

Query: 108 IFEHDLKILKLI 119
           +F HDL+ILK I
Sbjct: 64  LFRHDLRILKFI 75


>ref|ZP_07796497.1| hypothetical protein PA39016_002500001 [Pseudomonas aeruginosa
           39016]
 gb|EFQ41593.1| hypothetical protein PA39016_002500001 [Pseudomonas aeruginosa
           39016]
          Length = 117

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)

Query: 7   EERITYQTLKVWALDAYFDFCRDN-GLVSQWSHEQVIARVDYS-FEDGFERPIEDLMWRV 64
           EER+TY  ++ W L +Y+++CR      S W   +      YS  E+ F+ PIE LM  V
Sbjct: 2   EERVTYGEIRAWFLGSYYNYCRVKLNHQSPWVEGESEVGYAYSELENSFDLPIEKLMLEV 61

Query: 65  ILLILSGGWYVEFVER-NRALIADLIVENGLQNMLSDLPLEEAEIFEHDLKILKL 118
           ++LILS G   + V+R +  +I  L+ E  L ++L DLP +EA     DL++L L
Sbjct: 62  LVLILSAGRSSDKVKRYHLDVIHGLLKEIKLSSVLDDLPSDEAAELRDDLRVLGL 116


>ref|ZP_04934217.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gb|EAZ58336.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 117

 Score = 62.0 bits (149), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 7   EERITYQTLKVWALDAYFDFCRDN-GLVSQWSHEQVIARVDYS-FEDGFERPIEDLMWRV 64
           EER+TY  ++ W L +Y+++CR      S W   +      YS  E+ F+ PIE LM  V
Sbjct: 2   EERVTYGEIRAWFLGSYYNYCRVKLNHQSPWVEGESEVGYAYSELENSFDLPIEKLMLEV 61

Query: 65  ILLILSGGWYVEFVER-NRALIADLIVENGLQNMLSDLPLEEAEIFEHDLKILKL 118
           + LILS G   + V+R +  +I  L+ E  L ++L DLP +EA     DL++L L
Sbjct: 62  LALILSAGRSSDKVKRYHLDIIHGLLKEIKLSSVLDDLPSDEAAELRDDLRVLGL 116