BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0788.p (396 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774097.1| 3-phosphoglycerate kinase [Herbaspirillum se... 678 0.0 ref|YP_004754435.1| phosphoglycerate kinase [Collimonas fungivor... 613 e-173 ref|YP_002980456.1| phosphoglycerate kinase [Ralstonia pickettii... 609 e-172 ref|YP_001898078.1| phosphoglycerate kinase [Ralstonia pickettii... 607 e-171 ref|ZP_07675380.1| phosphoglycerate kinase [Ralstonia sp. 5_7_47... 606 e-171 >ref|YP_003774097.1| 3-phosphoglycerate kinase [Herbaspirillum seropedicae SmR1] gb|ADJ62189.1| 3-phosphoglycerate kinase protein [Herbaspirillum seropedicae SmR1] Length = 396 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 389/396 (98%), Positives = 393/396 (99%) Query: 1 MKFNRLSDLISAKQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIRDAQQAGAAVM 60 MKFNRLSDLIS KQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIR+AQQAGAAVM Sbjct: 1 MKFNRLSDLISNKQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIREAQQAGAAVM 60 Query: 61 VTSHLGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVADWVDGVDVQPGQVVLLENCRLN 120 VTSHLGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVA+WVDGVDVQPGQVVLLENCRLN Sbjct: 61 VTSHLGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVANWVDGVDVQPGQVVLLENCRLN 120 Query: 121 KGEKKNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALG 180 KGEKKNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALG Sbjct: 121 KGEKKNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALG 180 Query: 181 KALNQPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAE 240 KALNQPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAE Sbjct: 181 KALNQPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAE 240 Query: 241 PDLVDDAKAIIELMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQT 300 PDLVDDAKAII+LMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQT Sbjct: 241 PDLVDDAKAIIDLMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQT 300 Query: 301 AAVLAEQLGRAGTIVWNGPVGVFEFDQFGRGTETLAKAIAASSGFSIAGGGDTLAAIAKY 360 AA LAEQLGRAGTIVWNGPVGVFEFDQFG GTETLA+AIAASSGFSIAGGGDTLAAIAKY Sbjct: 301 AAALAEQLGRAGTIVWNGPVGVFEFDQFGGGTETLARAIAASSGFSIAGGGDTLAAIAKY 360 Query: 361 NIADKVGYISTGGGAFLEFLEGKTLPAVEILLQRAQ 396 NIADKVGYISTGGGAFLEFLEGKTLPAVEILLQRAQ Sbjct: 361 NIADKVGYISTGGGAFLEFLEGKTLPAVEILLQRAQ 396 >ref|YP_004754435.1| phosphoglycerate kinase [Collimonas fungivorans Ter331] gb|AEK63612.1| Phosphoglycerate kinase [Collimonas fungivorans Ter331] Length = 397 Score = 613 bits (1581), Expect = e-173, Method: Composition-based stats. Identities = 339/395 (85%), Positives = 365/395 (92%) Query: 1 MKFNRLSDLISAKQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIRDAQQAGAAVM 60 MKFNRLSDLI+ QLQGKRVFIRADLNVPQD AGNITEDTR+RASVPAIR A AGAAVM Sbjct: 1 MKFNRLSDLIAQHQLQGKRVFIRADLNVPQDAAGNITEDTRVRASVPAIRQALDAGAAVM 60 Query: 61 VTSHLGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVADWVDGVDVQPGQVVLLENCRLN 120 VTSHLGRPTEGEFKPEDSLAP+AKRL+ELLG V+L +WVDGV+V PGQVVLLENCR+N Sbjct: 61 VTSHLGRPTEGEFKPEDSLAPIAKRLAELLGQPVELRQNWVDGVEVAPGQVVLLENCRVN 120 Query: 121 KGEKKNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALG 180 KGEKKNSDELAQKIAKLCDIYVNDAFGTAHRAEATT+G+AKFAP+ACAGPLLAAELDALG Sbjct: 121 KGEKKNSDELAQKIAKLCDIYVNDAFGTAHRAEATTHGIAKFAPIACAGPLLAAELDALG 180 Query: 181 KALNQPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAE 240 KALNQPARPLVAIVAGSKVS+KLTILK LA+KVDNLIVGGGIANTF+LA+GLKIGKSLAE Sbjct: 181 KALNQPARPLVAIVAGSKVSSKLTILKALADKVDNLIVGGGIANTFLLASGLKIGKSLAE 240 Query: 241 PDLVDDAKAIIELMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQT 300 PDLV++AKAII++MAKRGASVPIP DVV KEFSPTA A VK ADVADDD+I DIGP+T Sbjct: 241 PDLVEEAKAIIDMMAKRGASVPIPVDVVCAKEFSPTATAQVKDVADVADDDLILDIGPKT 300 Query: 301 AAVLAEQLGRAGTIVWNGPVGVFEFDQFGRGTETLAKAIAASSGFSIAGGGDTLAAIAKY 360 AA LA Q+ +AGT+VWNGPVGVFEFDQFG GT+TLA AIA S FSIAGGGDTLAAIAKY Sbjct: 301 AATLAAQIAQAGTVVWNGPVGVFEFDQFGEGTKTLALAIANSKAFSIAGGGDTLAAIAKY 360 Query: 361 NIADKVGYISTGGGAFLEFLEGKTLPAVEILLQRA 395 I DK+GYISTGGGAFLEFLEGKTLPAVEILLQRA Sbjct: 361 KITDKIGYISTGGGAFLEFLEGKTLPAVEILLQRA 395 >ref|YP_002980456.1| phosphoglycerate kinase [Ralstonia pickettii 12D] gb|ACS61784.1| Phosphoglycerate kinase [Ralstonia pickettii 12D] Length = 403 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 349/392 (89%), Positives = 365/392 (93%) Query: 5 RLSDLISAKQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIRDAQQAGAAVMVTSH 64 RLSDLIS +L GKRVFIRADLNVPQDDAGNITEDTRIRASVPAI+ A AGAAVMVTSH Sbjct: 6 RLSDLISEGKLAGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIKAALDAGAAVMVTSH 65 Query: 65 LGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVADWVDGVDVQPGQVVLLENCRLNKGEK 124 LGRPTEGEFKPEDSLAPVAKRLSELLG +VKLV +WVDGVDV PGQVVLLENCR+NKGEK Sbjct: 66 LGRPTEGEFKPEDSLAPVAKRLSELLGRDVKLVQNWVDGVDVAPGQVVLLENCRVNKGEK 125 Query: 125 KNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALGKALN 184 KNSDELAQK+AKLCD+YVNDAFGTAHRAEATT+G+AKFAPVACAGPLLAAELDALGKAL Sbjct: 126 KNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKFAPVACAGPLLAAELDALGKALG 185 Query: 185 QPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAEPDLV 244 QPARPLVAIVAGSKVSTKLTILK+LA+KVDNLIVGGGIANTFMLAAGLKIGKSLAE DLV Sbjct: 186 QPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLAEADLV 245 Query: 245 DDAKAIIELMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQTAAVL 304 DAKAIIE++A RGASVPIP DVV KEFS TA ATVK ADVADDDMI DIGP+TAA L Sbjct: 246 GDAKAIIEMLAARGASVPIPVDVVCAKEFSATAVATVKDVADVADDDMILDIGPKTAAQL 305 Query: 305 AEQLGRAGTIVWNGPVGVFEFDQFGRGTETLAKAIAASSGFSIAGGGDTLAAIAKYNIAD 364 AEQL AGTIVWNGPVGVFEFDQFG GT+ LA+AIAASSGFSIAGGGDTLAAIAKYNIAD Sbjct: 306 AEQLKSAGTIVWNGPVGVFEFDQFGNGTKVLAEAIAASSGFSIAGGGDTLAAIAKYNIAD 365 Query: 365 KVGYISTGGGAFLEFLEGKTLPAVEILLQRAQ 396 KVGYISTGGGAFLEFLEGKTLPAVEIL QRAQ Sbjct: 366 KVGYISTGGGAFLEFLEGKTLPAVEILEQRAQ 397 >ref|YP_001898078.1| phosphoglycerate kinase [Ralstonia pickettii 12J] gb|ACD25646.1| Phosphoglycerate kinase [Ralstonia pickettii 12J] Length = 403 Score = 607 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 347/392 (88%), Positives = 366/392 (93%) Query: 5 RLSDLISAKQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIRDAQQAGAAVMVTSH 64 RLSDLIS +L GKRVFIRADLNVPQDDAGNITEDTRIRASVPA++ A AGAAVMVTSH Sbjct: 6 RLSDLISEGKLAGKRVFIRADLNVPQDDAGNITEDTRIRASVPAVKAALDAGAAVMVTSH 65 Query: 65 LGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVADWVDGVDVQPGQVVLLENCRLNKGEK 124 LGRPTEGEFKPEDSLAPVAKRLSELLG +VKLV +WVDGV+V PGQVVLLENCR+NKGEK Sbjct: 66 LGRPTEGEFKPEDSLAPVAKRLSELLGRDVKLVQNWVDGVEVAPGQVVLLENCRVNKGEK 125 Query: 125 KNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALGKALN 184 KNSDELAQK+AKLCD+YVNDAFGTAHRAEATT+G+AKFAP+ACAGPLLAAELDALGKAL Sbjct: 126 KNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKFAPIACAGPLLAAELDALGKALG 185 Query: 185 QPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAEPDLV 244 QPARPLVAIVAGSKVSTKLTILK+LA+KVDNLIVGGGIANTFMLAAGLKIGKSLAE DLV Sbjct: 186 QPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLAEADLV 245 Query: 245 DDAKAIIELMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQTAAVL 304 DAKAIIE++A RGASVPIP DVV KEFS TAAATVK ADVADDDMI DIGP+TAA L Sbjct: 246 GDAKAIIEMLAARGASVPIPVDVVCAKEFSATAAATVKDVADVADDDMILDIGPKTAAQL 305 Query: 305 AEQLGRAGTIVWNGPVGVFEFDQFGRGTETLAKAIAASSGFSIAGGGDTLAAIAKYNIAD 364 AEQL AGTIVWNGPVGVFEFDQFG GT+ LA+AIAASSGFSIAGGGDTLAAIAKYNIAD Sbjct: 306 AEQLKTAGTIVWNGPVGVFEFDQFGNGTKVLAEAIAASSGFSIAGGGDTLAAIAKYNIAD 365 Query: 365 KVGYISTGGGAFLEFLEGKTLPAVEILLQRAQ 396 KVGYISTGGGAFLEFLEGKTLPAVEIL QRAQ Sbjct: 366 KVGYISTGGGAFLEFLEGKTLPAVEILEQRAQ 397 >ref|ZP_07675380.1| phosphoglycerate kinase [Ralstonia sp. 5_7_47FAA] gb|EFP66216.1| phosphoglycerate kinase [Ralstonia sp. 5_7_47FAA] Length = 403 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 347/392 (88%), Positives = 365/392 (93%) Query: 5 RLSDLISAKQLQGKRVFIRADLNVPQDDAGNITEDTRIRASVPAIRDAQQAGAAVMVTSH 64 RLSDLIS +L GKRVFIRADLNVPQD AGNITEDTRIRASVPA++ A AGAAVMVTSH Sbjct: 6 RLSDLISEGKLAGKRVFIRADLNVPQDGAGNITEDTRIRASVPAVKAALDAGAAVMVTSH 65 Query: 65 LGRPTEGEFKPEDSLAPVAKRLSELLGSEVKLVADWVDGVDVQPGQVVLLENCRLNKGEK 124 LGRPTEGEFKPEDSLAPVAKRLSELLG +VKLV +WVDGVDV PGQVVLLENCR+NKGEK Sbjct: 66 LGRPTEGEFKPEDSLAPVAKRLSELLGRDVKLVQNWVDGVDVAPGQVVLLENCRVNKGEK 125 Query: 125 KNSDELAQKIAKLCDIYVNDAFGTAHRAEATTYGVAKFAPVACAGPLLAAELDALGKALN 184 KNSDELAQK+AKLCD+YVNDAFGTAHRAEATT+G+AKFAP+ACAGPLLAAELDALGKAL Sbjct: 126 KNSDELAQKMAKLCDVYVNDAFGTAHRAEATTHGIAKFAPIACAGPLLAAELDALGKALG 185 Query: 185 QPARPLVAIVAGSKVSTKLTILKTLAEKVDNLIVGGGIANTFMLAAGLKIGKSLAEPDLV 244 QPARPLVAIVAGSKVSTKLTILK+LA+KVDNLIVGGGIANTFMLAAGLKIGKSLAE DLV Sbjct: 186 QPARPLVAIVAGSKVSTKLTILKSLADKVDNLIVGGGIANTFMLAAGLKIGKSLAEADLV 245 Query: 245 DDAKAIIELMAKRGASVPIPTDVVVGKEFSPTAAATVKAAADVADDDMIFDIGPQTAAVL 304 DAKAIIE++A RGASVPIP DVV KEFS TAAATVK ADVADDDMI DIGP+TAA L Sbjct: 246 GDAKAIIEMLAARGASVPIPVDVVCAKEFSATAAATVKDVADVADDDMILDIGPKTAAQL 305 Query: 305 AEQLGRAGTIVWNGPVGVFEFDQFGRGTETLAKAIAASSGFSIAGGGDTLAAIAKYNIAD 364 AEQL AGTIVWNGPVGVFEFDQFG GT+ LA+AIAASSGFSIAGGGDTLAAIAKYNIAD Sbjct: 306 AEQLKSAGTIVWNGPVGVFEFDQFGNGTKVLAEAIAASSGFSIAGGGDTLAAIAKYNIAD 365 Query: 365 KVGYISTGGGAFLEFLEGKTLPAVEILLQRAQ 396 KVGYISTGGGAFLEFLEGKTLPAVEIL QRAQ Sbjct: 366 KVGYISTGGGAFLEFLEGKTLPAVEILEQRAQ 397