BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0783.p         (187 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774092.1| hypothetical protein Hsero_0665 [Herbaspiril...   237   5e-61
ref|YP_001354540.1| hypothetical protein mma_2850 [Janthinobacte...   172   2e-41
ref|ZP_08275552.1| Alternative dihydrofolate reductase 3 [Oxalob...   172   3e-41
ref|YP_001100856.1| hypothetical protein HEAR2613 [Herminiimonas...   171   6e-41
ref|YP_004754438.1| alternative dihydrofolate reductase 3 [Colli...   167   6e-40

>ref|YP_003774092.1| hypothetical protein Hsero_0665 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62184.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 143

 Score =  237 bits (605), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 125/144 (86%), Positives = 136/144 (94%), Gaps = 1/144 (0%)

Query: 44  MPRNKLIHGSPDEIEAAYYDALARADLEALMDLWADDEEIVCIHPGAQRLVGHADIRAVW 103
           MPR  LIHGSPD+IEAAYYDALARADL+ALM LWA+DEEIVCIHPGAQRLVGHA+IRAVW
Sbjct: 1   MPRTTLIHGSPDDIEAAYYDALARADLDALMALWAEDEEIVCIHPGAQRLVGHAEIRAVW 60

Query: 104 EDILSNGGLHIRPRQLHATQNMMTAVHSVVEDIDHGGDPQQDVHVIATNVYLKTALGWRM 163
           EDILS+GGLHIRPRQLHATQNMMT+VHSV+E+IDHG + Q DVHVIATNVYLKTA+GWR+
Sbjct: 61  EDILSSGGLHIRPRQLHATQNMMTSVHSVIEEIDHGNE-QPDVHVIATNVYLKTAMGWRI 119

Query: 164 VMHHASVAPGAAPVEPVISGAMLH 187
           VMHHASVAPGAAPVE V SGAMLH
Sbjct: 120 VMHHASVAPGAAPVEAVASGAMLH 143


>ref|YP_001354540.1| hypothetical protein mma_2850 [Janthinobacterium sp. Marseille]
 gb|ABR90957.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 142

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/144 (58%), Positives = 111/144 (77%), Gaps = 2/144 (1%)

Query: 44  MPRNKLIHGSPDEIEAAYYDALARADLEALMDLWADDEEIVCIHPGAQRLVGHADIRAVW 103
           MP+ +   G+ D+IE A YDA+ RADL+ALM LWADDEEIVCIHP   RL+G+A IRA W
Sbjct: 1   MPKARKQFGTADDIEVALYDAIGRADLDALMALWADDEEIVCIHPDGTRLIGYAAIRASW 60

Query: 104 EDILSNGGLHIRPRQLHATQNMMTAVHSVVEDIDHGGDPQQDVHVIATNVYLKTALGWRM 163
           E+I + GG+HIRP QLHA+QN M AVH+++E ++   D Q+D+H+IATNVY+KT LGWR+
Sbjct: 61  EEIFTRGGVHIRPTQLHASQNTMNAVHNLIETVN-TTDTQRDIHIIATNVYIKTPLGWRI 119

Query: 164 VMHHASVAPGAAPVEPVISGAMLH 187
           V+HHAS+APG  P   ++   +LH
Sbjct: 120 VLHHASIAPG-KPRPELVPSNVLH 142


>ref|ZP_08275552.1| Alternative dihydrofolate reductase 3 [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF30984.1| Alternative dihydrofolate reductase 3 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 142

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 87/144 (60%), Positives = 109/144 (75%), Gaps = 2/144 (1%)

Query: 44  MPRNKLIHGSPDEIEAAYYDALARADLEALMDLWADDEEIVCIHPGAQRLVGHADIRAVW 103
           M R K + GSPD+ EAA+YDAL RADLEALM LWADDEEI CIHPGA RL+GHA IRA W
Sbjct: 1   MSRKKQLSGSPDDTEAAFYDALGRADLEALMALWADDEEITCIHPGAPRLIGHAAIRASW 60

Query: 104 EDILSNGGLHIRPRQLHATQNMMTAVHSVVEDIDHGGDPQQDVHVIATNVYLKTALGWRM 163
           + + ++GG+HI P QLH  QN+M A HSV+E +   GD  Q++H++ATNVY+KT +GWR+
Sbjct: 61  QAVFAHGGVHIHPVQLHVMQNLMAATHSVLEQM-RSGDITQELHILATNVYIKTPMGWRI 119

Query: 164 VMHHASVAPGAAPVEPVISGAMLH 187
            +HHAS+APG  PV  V+    LH
Sbjct: 120 AVHHASIAPGKPPV-VVVDSTTLH 142


>ref|YP_001100856.1| hypothetical protein HEAR2613 [Herminiimonas arsenicoxydans]
 emb|CAL62735.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 143

 Score =  171 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 82/144 (56%), Positives = 110/144 (76%), Gaps = 1/144 (0%)

Query: 44  MPRNKLIHGSPDEIEAAYYDALARADLEALMDLWADDEEIVCIHPGAQRLVGHADIRAVW 103
           MP+ +   G+ D+IE A YDA+ RADLEALM+LWADDEEIVCIHP   RL+G+A IR  W
Sbjct: 1   MPKIRKQFGTADDIENALYDAIGRADLEALMELWADDEEIVCIHPDGTRLIGYAAIRTSW 60

Query: 104 EDILSNGGLHIRPRQLHATQNMMTAVHSVVEDIDHGGDPQQDVHVIATNVYLKTALGWRM 163
           E+I + GG+HIRP QLH + N+M+AVH+++E +      Q+DVH++ATNVY+KT LGWR+
Sbjct: 61  EEIFTRGGVHIRPLQLHTSHNVMSAVHNLIEAVFTIEGAQRDVHILATNVYVKTPLGWRL 120

Query: 164 VMHHASVAPGAAPVEPVISGAMLH 187
           V+HHAS APG A  E +++  +LH
Sbjct: 121 VLHHASTAPGKAKSE-LVANNVLH 143


>ref|YP_004754438.1| alternative dihydrofolate reductase 3 [Collimonas fungivorans
           Ter331]
 gb|AEK63615.1| Alternative dihydrofolate reductase 3 [Collimonas fungivorans
           Ter331]
          Length = 143

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 83/144 (57%), Positives = 110/144 (76%), Gaps = 1/144 (0%)

Query: 44  MPRNKLIHGSPDEIEAAYYDALARADLEALMDLWADDEEIVCIHPGAQRLVGHADIRAVW 103
           MP  K +HGS +E E A+YDA++RAD+EA+M LWADD+EIVCIHP A RL GHA IRA +
Sbjct: 1   MPHVKFMHGSAEETETAFYDAMSRADIEAMMALWADDDEIVCIHPNATRLHGHAAIRAAF 60

Query: 104 EDILSNGGLHIRPRQLHATQNMMTAVHSVVEDIDHGGDPQQDVHVIATNVYLKTALGWRM 163
           E +   GG+HIR RQLH T NM T++H++VE++    +  +++H++ATN+Y+KT  GWR+
Sbjct: 61  ESLFERGGVHIRARQLHVTHNMSTSIHNLVEELHQASESDREMHILATNIYMKTPRGWRI 120

Query: 164 VMHHASVAPGAAPVEPVISGAMLH 187
           V+HHASVAPGAAP E   S A LH
Sbjct: 121 VLHHASVAPGAAP-EETTSSATLH 143