BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0780.p (523 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774089.1| Zn-dependent protease [Herbaspirillum serope... 808 0.0 ref|YP_004754441.1| putative peptidase family M48 protein [Colli... 583 e-164 ref|YP_001354543.1| M48 family peptidase [Janthinobacterium sp. ... 545 e-153 emb|CAL62738.2| Putative peptidase family M48 protein [Herminiim... 543 e-152 ref|ZP_08274655.1| putative peptidase family M48 protein [Oxalob... 529 e-148 >ref|YP_003774089.1| Zn-dependent protease [Herbaspirillum seropedicae SmR1] gb|ADJ62181.1| Zn-dependent protease, containing TPR repeats, protein [Herbaspirillum seropedicae SmR1] Length = 552 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 452/520 (86%), Positives = 486/520 (93%), Gaps = 3/520 (0%) Query: 7 TGSMQRTVPE---LSRRPLRRLLMRALSATFLLLPAAPLTLLPHPGVAQGLPTLGDTERE 63 + SMQR VP+ SRRP R+L+ R LSA LLLPAAPLTLLPHPGVAQ LPTLGDTERE Sbjct: 32 SSSMQRYVPDAIACSRRPARKLITRLLSAALLLLPAAPLTLLPHPGVAQSLPTLGDTERE 91 Query: 64 GLSPLMERKLGEEIMRDIRTDRDYVDDGPISEYLNNFGQNLVSVRPDVRGEAGYDFFFFA 123 GLSPLMER+LGEEIMRDIR+DRDYVDDGPISEYLNNFG NLVS+ P+VRGEAG+DF FF Sbjct: 92 GLSPLMERRLGEEIMRDIRSDRDYVDDGPISEYLNNFGLNLVSIHPEVRGEAGFDFQFFM 151 Query: 124 VRDPVLNAFALPGGFIAVHSGLLLAAQSESELASVLAHEIGHVAQRHIARMLGQQKQNSM 183 VRDP+LNAFALPGGFI V+SGL+LAAQSESELA V++HEIGHVAQRHIARMLGQQKQNSM Sbjct: 152 VRDPMLNAFALPGGFIGVNSGLVLAAQSESELAGVMSHEIGHVAQRHIARMLGQQKQNSM 211 Query: 184 IQLAAIVLGALAGVSKAGGDAAMATMMGGTGLAVQRQLNFSRDAEREADRIGLQIMRDGG 243 IQLAAIVLGALAGVSKAGGDAAMATMMGGTGLAVQRQLNFSRDAEREADRIGLQIMRDGG Sbjct: 212 IQLAAIVLGALAGVSKAGGDAAMATMMGGTGLAVQRQLNFSRDAEREADRIGLQIMRDGG 271 Query: 244 FDPSGMVTFFGRLQTASRNYSDAVPPYLMTHPLTTERIADIQARIRDQRYKQRVDNPEFQ 303 FDPSGMVTFFGRLQ ASRNYSDAVPPYLMTHPLTTERIADI+ARIRDQRYKQRVDNPEFQ Sbjct: 272 FDPSGMVTFFGRLQAASRNYSDAVPPYLMTHPLTTERIADIEARIRDQRYKQRVDNPEFQ 331 Query: 304 LARARTQVLQNDSVQGLRDNVAKFTDQAKGNTKLMTAAAKYGLAYAYYRQNRFEQAEAAL 363 L RARTQVLQND+VQGLR+N KF QA+ NTKL TAAAKYGLAY YYRQN+FEQAE AL Sbjct: 332 LVRARTQVLQNDTVQGLRENAEKFIAQARQNTKLQTAAAKYGLAYVYYRQNKFEQAETAL 391 Query: 364 KEAQEAAIPMKTGIFFGSLDIDIKIARKQTQQALQVAESMRQQYPISRSVARQYADALIA 423 KEAQEAAIPMKTGI FGSLDIDIKIARKQ+ QA+Q+A+++R+Q+PISR++ARQYADALIA Sbjct: 392 KEAQEAAIPMKTGIMFGSLDIDIKIARKQSSQAVQLADALRKQFPISRTIARQYADALIA 451 Query: 424 ANRYDQAVSYLRDQAQLYRSDAQVQQLLAKVYAAQGKQALQHLALAESYALNGSLLAAID 483 A R D+AV+YLRDQAQLYRSDAQVQQLLAK YA+QGKQALQHLALAESYALNGSLLAAID Sbjct: 452 ARRTDEAVAYLRDQAQLYRSDAQVQQLLAKAYASQGKQALQHLALAESYALNGSLLAAID 511 Query: 484 QLGIARKAPDATFYDQSQIDAREREWKARWKDEQKELKDR 523 QLGIAR+APDATFYDQSQIDAREREWK RWKDEQKE+KDR Sbjct: 512 QLGIARRAPDATFYDQSQIDAREREWKERWKDEQKEMKDR 551 >ref|YP_004754441.1| putative peptidase family M48 protein [Collimonas fungivorans Ter331] gb|AEK63618.1| putative peptidase family M48 protein [Collimonas fungivorans Ter331] Length = 501 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 323/501 (64%), Positives = 389/501 (77%), Gaps = 8/501 (1%) Query: 23 RRLLMRALSATFLLLPAAPLTLLPHPGVAQGLPTLGDTEREGLSPLMERKLGEEIMRDIR 82 RR+L+ AL + +LPA Q LPTLGDT RE LSPLMERKLGEE+M DIR Sbjct: 9 RRILLAALISACCVLPAKLAF------AVQNLPTLGDTSRESLSPLMERKLGEEVMHDIR 62 Query: 83 TDRDYVDDGPISEYLNNFGQNLVSVRPDVRGEAGYDFFFFAVRDPVLNAFALPGGFIAVH 142 D DY++D P+ EYLNNFG LV+ RP+VRGEAG+DFFFFAVRDPVLNAFALPGGFI VH Sbjct: 63 RDPDYLNDAPLLEYLNNFGWTLVNARPEVRGEAGFDFFFFAVRDPVLNAFALPGGFIGVH 122 Query: 143 SGLLLAAQSESELASVLAHEIGHVAQRHIARMLGQQKQNSMIQLAAIVLGALAGVSKAGG 202 SGLLLAAQSESELASVLAHEIGHVAQRHIARM+G QKQ+SMI LA+++LGALA + G Sbjct: 123 SGLLLAAQSESELASVLAHEIGHVAQRHIARMVGSQKQDSMIALASMLLGALA--MRGSG 180 Query: 203 DAAMATMMGGTGLAVQRQLNFSRDAEREADRIGLQIMRDGGFDPSGMVTFFGRLQTASRN 262 DA A MMGGTGLA+QRQLNFSRDAEREADRIGL I+ GGFD SGMV FFGR+QTASRN Sbjct: 181 DAGAAVMMGGTGLAMQRQLNFSRDAEREADRIGLSILDSGGFDTSGMVAFFGRMQTASRN 240 Query: 263 YSDAVPPYLMTHPLTTERIADIQARIRDQRYKQRVDNPEFQLARARTQVLQNDSVQGLRD 322 YSD VPPYL+THPLTTERIADI+ARIR+QRY+QR D+ +FQL RAR +VLQ+D+ QG RD Sbjct: 241 YSDVVPPYLLTHPLTTERIADIEARIREQRYRQRADSLDFQLIRARVRVLQDDTEQGRRD 300 Query: 323 NVAKFTDQAKGNTKLMTAAAKYGLAYAYYRQNRFEQAEAALKEAQEAAIPMKTGIFFGSL 382 F Q + NTK AAKYG+A+ ++Q +++AE L++A AA+P K + L Sbjct: 301 AQIVFDAQLQLNTKQQIVAAKYGMAFLAFKQGAYDKAEDLLQQAVAAALPAKQSLVLTDL 360 Query: 383 DIDIKIARKQTQQALQVAESMRQQYPISRSVARQYADALIAANRYDQAVSYLRDQAQLYR 442 ++I +A K+ +AL++ + + QYP+SR +A QYA ALIA+ R D A+ YLR+QA+LYR Sbjct: 361 GVEIMLASKREAEALKLVQQGQLQYPLSRGLAHQYARALIASKRLDDAIKYLREQARLYR 420 Query: 443 SDAQVQQLLAKVYAAQGKQALQHLALAESYALNGSLLAAIDQLGIARKAPDATFYDQSQI 502 DA VQ LLA+ Y+AQGK+ALQH+ALAESY L GS+ AA+DQL IAR + DA FYDQS I Sbjct: 421 QDADVQDLLAQAYSAQGKRALQHMALAESYVLTGSVPAALDQLRIARNSGDAGFYDQSMI 480 Query: 503 DAREREWKARWKDEQKELKDR 523 DARERE + RWK+E K+R Sbjct: 481 DARERELQERWKEELAASKER 501 >ref|YP_001354543.1| M48 family peptidase [Janthinobacterium sp. Marseille] gb|ABR89764.1| peptidase M48 family [Janthinobacterium sp. Marseille] Length = 524 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 306/491 (62%), Positives = 373/491 (75%), Gaps = 5/491 (1%) Query: 35 LLLPAAPLTLLPHPGVAQGLPTLGDTEREGLSPLMERKLGEEIMRDIRTDRDYVDDGPIS 94 L L P + P AQ LP+LGDTERE LSPLMERKLGE+IMR+I+ +RDY+ D P+ Sbjct: 32 LALSTLPGMVAPSLVHAQSLPSLGDTEREALSPLMERKLGEQIMREIKRNRDYLSDAPLQ 91 Query: 95 EYLNNFGQNLVSVRPDVRGEAGYDFFFFAVRDPVLNAFALPGGFIAVHSGLLLAAQSESE 154 EYLNN G +L++VRP+ RGEA YDFFFFAVRDP+LNAFALPGGFI VHS L+LAAQ+ESE Sbjct: 92 EYLNNLGASLLTVRPEARGEAQYDFFFFAVRDPMLNAFALPGGFIGVHSALVLAAQNESE 151 Query: 155 LASVLAHEIGHVAQRHIARMLGQQKQNSMIQLAAIVLGALAGVSKAGGDAAMATMMGGTG 214 LASV+AHEIGHVAQRHIARMLG+QKQ+ +I LA+++LGALA S DA MA +MGG G Sbjct: 152 LASVMAHEIGHVAQRHIARMLGKQKQDMLIPLASMILGALAISSSP--DAGMAMIMGGQG 209 Query: 215 LAVQRQLNFSRDAEREADRIGLQIMRDGGFDPSGMVTFFGRLQTASRNYSDAVPPYLMTH 274 LA+QRQLNFSRDAEREADR+GL IMR+ GF+ +GM+ FFGRLQTASRNYSD PPYL +H Sbjct: 210 LAIQRQLNFSRDAEREADRVGLDIMREAGFETTGMINFFGRLQTASRNYSDNAPPYLRSH 269 Query: 275 PLTTERIADIQARIRDQRYKQRVDNPEFQLARARTQVLQNDSVQGLRDNVAKFTDQAKGN 334 P+TTERIADIQAR RD RY+Q VD+ +F L +AR +VLQ+ QGL D + F Q + Sbjct: 270 PMTTERIADIQARTRDLRYRQHVDSLDFPLIQARVRVLQDQGHQGLLDATSSFERQLQLK 329 Query: 335 TKLMTAAAKYGLAYAYYRQNRFEQAEAALKEAQEA---AIPMKTGIFFGSLDIDIKIARK 391 T+ T A KYGLA RQ +A++ L EA+ A P SL I+IK+A Sbjct: 330 TRTATVAGKYGLALVALRQGNPAKAQSLLNEARVALNNGSPSSKSAVLSSLAIEIKLAAH 389 Query: 392 QTQQALQVAESMRQQYPISRSVARQYADALIAANRYDQAVSYLRDQAQLYRSDAQVQQLL 451 Q ++A+Q A++ R Q+PISR +A QYADAL AA RY++A +YLRDQ QLYR + + + L Sbjct: 390 QPREAVQEADAARNQFPISRGIAHQYADALYAAGRYEEAAAYLRDQTQLYRQEPALYERL 449 Query: 452 AKVYAAQGKQALQHLALAESYALNGSLLAAIDQLGIARKAPDATFYDQSQIDAREREWKA 511 AKVYAA QA QHLALAESYALNGSL AA+DQL IARKAPDA+FYDQS IDARERE KA Sbjct: 450 AKVYAALKMQAQQHLALAESYALNGSLSAALDQLAIARKAPDASFYDQSIIDAREREIKA 509 Query: 512 RWKDEQKELKD 522 + ++ ++ K+ Sbjct: 510 QRLEDIRQEKE 520 >emb|CAL62738.2| Putative peptidase family M48 protein [Herminiimonas arsenicoxydans] Length = 485 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 306/485 (63%), Positives = 371/485 (76%), Gaps = 5/485 (1%) Query: 41 PLTLLPHPGVAQGLPTLGDTEREGLSPLMERKLGEEIMRDIRTDRDYVDDGPISEYLNNF 100 P + P AQ LP+LGDTERE LSPLMERKLGE+IMRDIR +RDY++D P+ EYLN Sbjct: 2 PPAIAPSAAFAQSLPSLGDTEREELSPLMERKLGEQIMRDIRRNRDYLNDEPLQEYLNGL 61 Query: 101 GQNLVSVRPDVRGEAGYDFFFFAVRDPVLNAFALPGGFIAVHSGLLLAAQSESELASVLA 160 G +L++VRP+ RGE YDFFFFAVRDP+LNAFALPGGFI VHS L+LAAQ+ESELASV+A Sbjct: 62 GNSLLAVRPEARGETQYDFFFFAVRDPMLNAFALPGGFIGVHSALVLAAQNESELASVMA 121 Query: 161 HEIGHVAQRHIARMLGQQKQNSMIQLAAIVLGALAGVSKAGGDAAMATMMGGTGLAVQRQ 220 HEIGHVAQRHIARMLG+QKQ+ +I LAA+VLGAL + A DA +A MMGG GLA+QRQ Sbjct: 122 HEIGHVAQRHIARMLGKQKQDMLIPLAAMVLGALT--ATASPDAGIAMMMGGQGLAIQRQ 179 Query: 221 LNFSRDAEREADRIGLQIMRDGGFDPSGMVTFFGRLQTASRNYSDAVPPYLMTHPLTTER 280 LNFSRDAEREADR+GL IMR+ GF+ SGM+ FFGRLQ ASRNY+D+ PPYL +HP+TTER Sbjct: 180 LNFSRDAEREADRVGLDIMREAGFETSGMINFFGRLQQASRNYTDSAPPYLRSHPMTTER 239 Query: 281 IADIQARIRDQRYKQRVDNPEFQLARARTQVLQNDSVQGLRDNVAKFTDQAKGNTKLMTA 340 IADI+AR RDQRY+Q D+ +F L +AR +VLQ+ S QG+ D A F Q + T+ Sbjct: 240 IADIEARTRDQRYRQHADSLDFPLIQARVKVLQDPSQQGMLDARAAFERQLQQKTRTAMI 299 Query: 341 AAKYGLAYAYYRQNRFEQAEAALKEAQ---EAAIPMKTGIFFGSLDIDIKIARKQTQQAL 397 A KYGLAY RQ ++A++ L +AQ +A P + SL IDIK+A Q ++A+ Sbjct: 300 AGKYGLAYVALRQGDAKKAQSMLNDAQATLKAGSPTARNVVLSSLAIDIKLAAHQPKEAV 359 Query: 398 QVAESMRQQYPISRSVARQYADALIAANRYDQAVSYLRDQAQLYRSDAQVQQLLAKVYAA 457 + AE R Q+P+SR +A QYADAL AA RYD AV +LRDQ QLYR + Q+ LAK YAA Sbjct: 360 EEAERARNQFPLSRGIAHQYADALFAAARYDDAVIFLRDQTQLYRHEPQLYDRLAKTYAA 419 Query: 458 QGKQALQHLALAESYALNGSLLAAIDQLGIARKAPDATFYDQSQIDAREREWKARWKDEQ 517 KQA QHLALAESYALNGSL AAIDQL IAR+APDA+FYD S IDARERE KA+ +E Sbjct: 420 LNKQAQQHLALAESYALNGSLPAAIDQLSIARRAPDASFYDLSIIDAREREMKAQRLEEI 479 Query: 518 KELKD 522 ++ K+ Sbjct: 480 RQEKE 484 >ref|ZP_08274655.1| putative peptidase family M48 protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31876.1| putative peptidase family M48 protein [Oxalobacteraceae bacterium IMCC9480] Length = 500 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 295/485 (60%), Positives = 368/485 (75%), Gaps = 7/485 (1%) Query: 37 LPAAPLTLLPHPGVAQGLPTLGDTEREGLSPLMERKLGEEIMRDIRTDRDYVDDGPISEY 96 LP P+ + LP+LGD+ERE LSPL ERKLGE IMRDIR DRDY+DD P +Y Sbjct: 10 LPLQPVRAAANLNDDVRLPSLGDSERESLSPLTERKLGEYIMRDIRRDRDYLDDAPTLDY 69 Query: 97 LNNFGQNLVSVRPDVRGEAGYDFFFFAVRDPVLNAFALPGGFIAVHSGLLLAAQSESELA 156 LNNFG L++ RP+ RGEAGYDFFFFAVRDP+LNAFALPGGFIAVHS LL+AAQSESELA Sbjct: 70 LNNFGNQLLAARPEARGEAGYDFFFFAVRDPMLNAFALPGGFIAVHSALLIAAQSESELA 129 Query: 157 SVLAHEIGHVAQRHIARMLGQQKQNSMIQLAAIVLGALAGVSKAGGDAAMATMMGGTGLA 216 SV+AHEIGHVAQRHIARMLGQQKQ+ +I LA +L LA +++ DA+ A ++G G+A Sbjct: 130 SVVAHEIGHVAQRHIARMLGQQKQDMLIPLAGAILAVLA--ARSNTDASAALLIGSQGVA 187 Query: 217 VQRQLNFSRDAEREADRIGLQIMRDGGFDPSGMVTFFGRLQTASRNYSDAVPPYLMTHPL 276 +QRQLNFSRDAEREADRIGLQI+RD GF+ +GMVTFFGR+Q+AS YSD +P YL +HPL Sbjct: 188 LQRQLNFSRDAEREADRIGLQILRDAGFETAGMVTFFGRMQSASSGYSDYLPAYLRSHPL 247 Query: 277 TTERIADIQARIRDQRYKQRVDNPEFQLARARTQVLQNDSVQGLRDNVAKFTDQAKGNTK 336 TTERIADI+ARIRD RY+Q DN +FQL RAR +VLQ+D+ QG RD + Q ++ Sbjct: 248 TTERIADIEARIRDLRYRQHADNVDFQLIRARMRVLQDDTSQGWRDASDIYRAQLLQQSR 307 Query: 337 LMTAAAKYGLAYAYYRQNRFEQAEAALKEAQEA---AIPMKTG--IFFGSLDIDIKIARK 391 T A KYGLA +R++ F A A L++A+ A P G L I++ +A Sbjct: 308 TQTVAGKYGLALVAFRRSEFATALALLQDARTALRSGAPRNGGESSVLDYLGIELLLASG 367 Query: 392 QTQQALQVAESMRQQYPISRSVARQYADALIAANRYDQAVSYLRDQAQLYRSDAQVQQLL 451 + +A+ +A++ R+++P+SR +AR+YAD L+A R D+A++YLRDQAQLYR+D VQ L Sbjct: 368 KATEAVSLADAARKRFPLSRGLARRYADVLLAVGRTDEALAYLRDQAQLYRTDPDVQDQL 427 Query: 452 AKVYAAQGKQALQHLALAESYALNGSLLAAIDQLGIARKAPDATFYDQSQIDAREREWKA 511 AKVY+ QGK+ LQHLALAESYAL GSL AA+DQL IAR APDATFYDQ+ +DARER+ + Sbjct: 428 AKVYSTQGKRVLQHLALAESYALRGSLQAAMDQLRIARTAPDATFYDQALVDARERDLEV 487 Query: 512 RWKDE 516 RWK+E Sbjct: 488 RWKEE 492