BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0772.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774082.1| recombinase A protein [Herbaspirillum serope... 616 e-174 ref|YP_001354551.1| recombinase A [Janthinobacterium sp. Marseil... 587 e-165 ref|YP_001100871.1| recombinase A [Herminiimonas arsenicoxydans]... 581 e-164 ref|YP_004754451.1| RecA protein [Collimonas fungivorans Ter331]... 578 e-163 ref|ZP_04577881.1| recA protein [Oxalobacter formigenes HOxBLS] ... 577 e-162 >ref|YP_003774082.1| recombinase A protein [Herbaspirillum seropedicae SmR1] sp|Q9F672|RECA_HERSE RecName: Full=Protein RecA; AltName: Full=Recombinase A gb|AAG13409.2|AF297289_1 SOS repair protein RecA [Herbaspirillum seropedicae] gb|ADJ62174.1| recombinase A protein [Herbaspirillum seropedicae SmR1] Length = 351 Score = 616 bits (1589), Expect = e-174, Method: Composition-based stats. Identities = 345/348 (99%), Positives = 348/348 (100%) Query: 34 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 93 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI Sbjct: 1 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 60 Query: 94 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLSD 153 GGLPRGRVIEIYGPESSGKTTLTLQ+IAEMQKLGGTCAFIDAEHALDVTYAQKLGVNL+D Sbjct: 61 GGLPRGRVIEIYGPESSGKTTLTLQSIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLND 120 Query: 154 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 213 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 180 Query: 214 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 273 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 274 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 333 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY Sbjct: 241 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 300 Query: 334 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELAGGEAEAKA 381 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELAGGEAEA+A Sbjct: 301 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELAGGEAEAEA 348 >ref|YP_001354551.1| recombinase A [Janthinobacterium sp. Marseille] sp|A6T204|RECA_JANMA RecName: Full=Protein RecA; AltName: Full=Recombinase A gb|ABR88805.1| RecA recombination protein [Janthinobacterium sp. Marseille] Length = 367 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 313/341 (91%), Positives = 329/341 (96%) Query: 34 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 93 MDDKK A +S+KSKALAAALAQIEKQFGKGSVMRMEDG + EE+Q VSTGSLGLDIALG+ Sbjct: 1 MDDKKNAPSSDKSKALAAALAQIEKQFGKGSVMRMEDGAVVEEVQVVSTGSLGLDIALGV 60 Query: 94 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLSD 153 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQKLGGTCAFIDAEHALDVTYAQKLG+NLSD Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVTYAQKLGINLSD 120 Query: 154 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 213 LLISQPDTGEQALEICDALVRSG VDLIV+DSVAALTP+AEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEICDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 214 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 273 ALRKLTGSINRTNT VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 274 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 333 GDEVIG+ETKVKVVKNK+APPF+EAHFDILYGEGTSREGEILDLGS+ K+VEKSGAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFKEAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 Query: 334 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELAG 374 NGERIGQGKDNARNYLKE P+LAREIENKVRV+LGVPEL Sbjct: 301 NGERIGQGKDNARNYLKERPDLAREIENKVRVSLGVPELGA 341 >ref|YP_001100871.1| recombinase A [Herminiimonas arsenicoxydans] sp|A4G8B3|RECA_HERAR RecName: Full=Protein RecA; AltName: Full=Recombinase A emb|CAL62750.1| Protein RecA (Recombinase A) [Herminiimonas arsenicoxydans] Length = 367 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 310/341 (90%), Positives = 328/341 (96%) Query: 34 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 93 MDDKK A +S+KSKALAAALAQIEKQFGKGSVMRMEDG + EE+Q VSTGSLGLD+ALG+ Sbjct: 1 MDDKKNAPSSDKSKALAAALAQIEKQFGKGSVMRMEDGAVVEEVQVVSTGSLGLDLALGV 60 Query: 94 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLSD 153 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQKLGGTCAFIDAEHALDVTYAQKLG+NLS+ Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVTYAQKLGINLSE 120 Query: 154 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 213 LLISQPDTGEQALEICDALVRSG VDLIV+DSVAALTP+AEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEICDALVRSGGVDLIVIDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 214 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 273 ALRKLTGSINRTNT VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 274 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 333 GDEVIG+ETKVKVVKNK+APPF+EAHF+ILYGEGTSREGEILDLGS+ K+VEKSGAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFKEAHFEILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 Query: 334 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELAG 374 NGERIGQGKDNARNYLKE PELAREIENKVR +LGVPEL Sbjct: 301 NGERIGQGKDNARNYLKERPELAREIENKVRASLGVPELGA 341 >ref|YP_004754451.1| RecA protein [Collimonas fungivorans Ter331] gb|AEK63628.1| RecA protein [Collimonas fungivorans Ter331] Length = 369 Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 309/340 (90%), Positives = 324/340 (95%) Query: 34 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 93 MDDKK+A N +KSKALAAALAQIEKQFGKGSVMRMEDG + EE+Q VSTGSLGLDIALG+ Sbjct: 1 MDDKKSAPNPDKSKALAAALAQIEKQFGKGSVMRMEDGAVVEEVQVVSTGSLGLDIALGV 60 Query: 94 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLSD 153 GGLPRGRV+EIYGPESSGKTTLTLQ IAEMQKLGGTCAFIDAEHALDV YAQKLG+NLS+ Sbjct: 61 GGLPRGRVVEIYGPESSGKTTLTLQTIAEMQKLGGTCAFIDAEHALDVGYAQKLGINLSE 120 Query: 154 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 213 LLISQPDTGEQALEI DALVRSG VDLIVVDSVAALTP+AEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEITDALVRSGGVDLIVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQ 180 Query: 214 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 273 ALRKLTGSINRTNT VIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 240 Query: 274 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 333 GDEVIG+ETKVKVVKNK+APPF+EAHFDILYGEGTSREGEILDLGS+ K+VEKSGAWYSY Sbjct: 241 GDEVIGNETKVKVVKNKIAPPFKEAHFDILYGEGTSREGEILDLGSDAKIVEKSGAWYSY 300 Query: 334 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPELA 373 NGERIGQGKDNAR YLKE PELAREIENKVR +LGVP L Sbjct: 301 NGERIGQGKDNARTYLKERPELAREIENKVRASLGVPLLG 340 >ref|ZP_04577881.1| recA protein [Oxalobacter formigenes HOxBLS] gb|EEO28843.1| recA protein [Oxalobacter formigenes HOxBLS] Length = 353 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 300/339 (88%), Positives = 319/339 (94%) Query: 34 MDDKKAANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIAEEIQAVSTGSLGLDIALGI 93 MDD K A+N EK+KALA ALAQIEKQFGKGSVMRM GV+ EEI VSTGSLGLDIALG+ Sbjct: 1 MDDNKTASNPEKNKALAIALAQIEKQFGKGSVMRMAPGVVVEEIPVVSTGSLGLDIALGV 60 Query: 94 GGLPRGRVIEIYGPESSGKTTLTLQAIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLSD 153 GGLPRGRVIEIYGPESSGKTTLTLQ IAEMQKLGGTCAFIDAEHALDV YAQKLGV+L D Sbjct: 61 GGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKLGGTCAFIDAEHALDVGYAQKLGVHLQD 120 Query: 154 LLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 213 LLISQPDTGEQALEI DALVRSGAVDLIV+DSVAALTPKAEIEGDMGDSLPGLQARLMSQ Sbjct: 121 LLISQPDTGEQALEITDALVRSGAVDLIVIDSVAALTPKAEIEGDMGDSLPGLQARLMSQ 180 Query: 214 ALRKLTGSINRTNTTVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKS 273 ALRKLTGSIN+TNT+VIFINQIRMKIGVMFGNPETTTGGNALKFY+SVRLDIRRTGSIKS Sbjct: 181 ALRKLTGSINKTNTSVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSIKS 240 Query: 274 GDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGSEHKVVEKSGAWYSY 333 DEVIGSET+VKVVKNK APPF+EA+FDILYGEGTSREGEILDLG++ K+VEK+G+WYSY Sbjct: 241 SDEVIGSETRVKVVKNKTAPPFKEAYFDILYGEGTSREGEILDLGADAKIVEKAGSWYSY 300 Query: 334 NGERIGQGKDNARNYLKEHPELAREIENKVRVALGVPEL 372 NGERIGQGKDNARNYL+ HP+LAREIENKVR A GV EL Sbjct: 301 NGERIGQGKDNARNYLRAHPKLAREIENKVRAAYGVREL 339