BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0768.p (314 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporte... 432 e-119 ref|YP_001354306.1| ABC-type nitrate/sulfonate/bicarbonate trans... 343 3e-92 ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transp... 341 8e-92 ref|ZP_08184182.1| ABC transporter, substrate-binding protein, a... 337 2e-90 ref|NP_641201.1| sulfonate-binding protein [Xanthomonas axonopod... 330 1e-88 >ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62170.1| ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 231/243 (95%), Positives = 233/243 (95%) Query: 64 MQRRDFLRLAPAALGATVLGSAPLLARAAQPPKTIRLDYAYYSPPSLVLRKFGWLEEDLK 123 M RRDFLRLAPAALG T LG PLL+ AAQPPK IRLDYAYYSPPSLVLRKFGWLEEDLK Sbjct: 1 MHRRDFLRLAPAALGVTALGGIPLLSSAAQPPKVIRLDYAYYSPPSLVLRKFGWLEEDLK 60 Query: 124 AQGTEVKWVLSAGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 183 AQGTEVKWVLS GSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL Sbjct: 61 AQGTEVKWVLSQGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 120 Query: 184 AVGKESTVKSITELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 243 AVGKES VKSI ELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE Sbjct: 121 AVGKESPVKSINELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 180 Query: 244 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDTFAARHPDQVKRVIAAYE 303 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSD+FAARHPDQVKRVIAAYE Sbjct: 181 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDSFAARHPDQVKRVIAAYE 240 Query: 304 RAR 306 RAR Sbjct: 241 RAR 243 >ref|YP_001354306.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR90065.1| ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component [Janthinobacterium sp. Marseille] Length = 332 Score = 343 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 170/243 (69%), Positives = 204/243 (83%) Query: 64 MQRRDFLRLAPAALGATVLGSAPLLARAAQPPKTIRLDYAYYSPPSLVLRKFGWLEEDLK 123 M RR F++ A + S L A AA P+ IRLDYAYYSP SLVL+ FGWLEE +K Sbjct: 1 MDRRFFIKNTALLTLAGLSTSVSLSAHAAAAPEEIRLDYAYYSPTSLVLKHFGWLEEQVK 60 Query: 124 AQGTEVKWVLSAGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSRPEWTAL 183 + G +VKW LS GSNRALEYL+++S+DFGSTAGLAA+L+RANGNP+K+VY+YSRPEWTAL Sbjct: 61 SSGIKVKWTLSQGSNRALEYLSANSIDFGSTAGLAAVLSRANGNPIKSVYVYSRPEWTAL 120 Query: 184 AVGKESTVKSITELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHADGRAALE 243 V K+S +K++ +LKGKKIAATKGTDPYLFLLR L NGLKKSDVEIVHLQHADGRAALE Sbjct: 121 LVPKDSPIKTVADLKGKKIAATKGTDPYLFLLRTLKVNGLKKSDVEIVHLQHADGRAALE 180 Query: 244 QGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDTFAARHPDQVKRVIAAYE 303 GR+ AWAGLDPH+A+SEL+AGSRL+YRNV FNTYGFLNV++ FA ++P+QVK+V+ AYE Sbjct: 181 SGRIDAWAGLDPHMASSELQAGSRLLYRNVAFNTYGFLNVTEDFAKKYPEQVKQVLQAYE 240 Query: 304 RAR 306 RAR Sbjct: 241 RAR 243 >ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Methyloversatilis universalis FAM5] gb|EGK72625.1| ABC-type nitrate/sulfonate/bicarbonate transport system [Methyloversatilis universalis FAM5] Length = 331 Score = 341 bits (875), Expect = 8e-92, Method: Composition-based stats. Identities = 169/216 (78%), Positives = 191/216 (88%) Query: 91 AAQPPKTIRLDYAYYSPPSLVLRKFGWLEEDLKAQGTEVKWVLSAGSNRALEYLNSDSVD 150 A PK IRLDYAYYSP SLVL++FGWLE+ +K G EVKW LS GSNRALE+LNS ++D Sbjct: 29 AGDAPKEIRLDYAYYSPTSLVLKRFGWLEQAVKPAGIEVKWTLSQGSNRALEFLNSGAID 88 Query: 151 FGSTAGLAALLARANGNPVKAVYIYSRPEWTALAVGKESTVKSITELKGKKIAATKGTDP 210 FGSTAGLAA+L+RANGNP+++VY+YSRPEWTALAV K+ST+KS+ ELKGK+IAATKGTDP Sbjct: 89 FGSTAGLAAVLSRANGNPIRSVYVYSRPEWTALAVPKDSTIKSVAELKGKRIAATKGTDP 148 Query: 211 YLFLLRALHENGLKKSDVEIVHLQHADGRAALEQGRVAAWAGLDPHLAASELEAGSRLIY 270 YLFLLR+LHE GL ++DVEIVHLQH DGR ALEQ RV AWAGLDPHLAASELEAGS+LIY Sbjct: 149 YLFLLRSLHEAGLSRNDVEIVHLQHPDGRVALEQKRVDAWAGLDPHLAASELEAGSKLIY 208 Query: 271 RNVNFNTYGFLNVSDTFAARHPDQVKRVIAAYERAR 306 RNVNFNTYGFLNVS+ F HPDQVK VIAAYERAR Sbjct: 209 RNVNFNTYGFLNVSEKFLKAHPDQVKTVIAAYERAR 244 >ref|ZP_08184182.1| ABC transporter, substrate-binding protein, aliphatic sulfonates family [Xanthomonas gardneri ATCC 19865] gb|EGD18195.1| ABC transporter, substrate-binding protein, aliphatic sulfonates family [Xanthomonas gardneri ATCC 19865] Length = 334 Score = 337 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 177/249 (71%), Positives = 207/249 (83%), Gaps = 8/249 (3%) Query: 64 MQRRDFLRLAPAALGATVLGSAPLLARA--AQP----PKTIRLDYAYYSPPSLVLRKFGW 117 M+RR+ L+ L LG++PLL+RA AQ PK +RLDYAYYSP SLVL+ FGW Sbjct: 1 MKRRNLLKFG--TLAGVALGTSPLLSRATLAQANGAVPKQLRLDYAYYSPTSLVLKHFGW 58 Query: 118 LEEDLKAQGTEVKWVLSAGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSR 177 LE+ LKAQGT+VKWVLSAGSNRALEYL +S+DFGSTAGLA+LLARANGNP+KAVYIYSR Sbjct: 59 LEQALKAQGTQVKWVLSAGSNRALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 178 PEWTALAVGKESTVKSITELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHAD 237 PEW ALAVGK S ++ +TELKGK+IAATKGTD YLFLLRAL + GL K+ VEIVHLQH D Sbjct: 119 PEWIALAVGKNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKNAVEIVHLQHPD 178 Query: 238 GRAALEQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDTFAARHPDQVKR 297 GR ALE+G V AW+GLDPHLAAS++EAG+RLIYRNV FN+ GFLNVS+TFAA +PDQ+ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGTRLIYRNVAFNSRGFLNVSETFAAAYPDQIPL 238 Query: 298 VIAAYERAR 306 VI AYE+AR Sbjct: 239 VIQAYEKAR 247 >ref|NP_641201.1| sulfonate-binding protein [Xanthomonas axonopodis pv. citri str. 306] gb|AAM35737.1| sulfonate binding protein [Xanthomonas axonopodis pv. citri str. 306] Length = 334 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 172/249 (69%), Positives = 202/249 (81%), Gaps = 8/249 (3%) Query: 64 MQRRDFLRLAPAALGATVLGSAPLLARAA------QPPKTIRLDYAYYSPPSLVLRKFGW 117 M+RR+ L+ L LG+ PLL+ A PK +R+DYAYYSP SLVL+ FGW Sbjct: 1 MKRRNLLKFG--TLAGVALGAPPLLSGTAFAQTKGAVPKQLRMDYAYYSPTSLVLKHFGW 58 Query: 118 LEEDLKAQGTEVKWVLSAGSNRALEYLNSDSVDFGSTAGLAALLARANGNPVKAVYIYSR 177 LEE LKAQGT+VKWVLSAGSNRALEYL +S+DFGSTAGLA+LLARANGNP+KAVYIYSR Sbjct: 59 LEETLKAQGTQVKWVLSAGSNRALEYLGGNSIDFGSTAGLASLLARANGNPIKAVYIYSR 118 Query: 178 PEWTALAVGKESTVKSITELKGKKIAATKGTDPYLFLLRALHENGLKKSDVEIVHLQHAD 237 PEW ALAVGK S ++ +TELKGK+IAATKGTD YLFLLRAL + GL KS V+IVHLQH D Sbjct: 119 PEWIALAVGKNSPIRQLTELKGKRIAATKGTDAYLFLLRALRQAGLSKSAVDIVHLQHPD 178 Query: 238 GRAALEQGRVAAWAGLDPHLAASELEAGSRLIYRNVNFNTYGFLNVSDTFAARHPDQVKR 297 GR ALE+G V AW+GLDPHLAAS++EAGSRLIYRN FN+ GFLNVS+TFA+ +P+Q+ Sbjct: 179 GRTALERGDVDAWSGLDPHLAASQIEAGSRLIYRNTAFNSRGFLNVSETFASAYPEQIPL 238 Query: 298 VIAAYERAR 306 VI AYE+AR Sbjct: 239 VIQAYEKAR 247