BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.0767.p         (94 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporte...   155   1e-36
ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transp...   101   4e-20
ref|YP_003606806.1| aliphatic sulfonates family ABC transporter ...   100   9e-20
ref|ZP_03265700.1| aliphatic sulfonates family ABC transporter, ...   100   1e-19
ref|ZP_06842204.1| aliphatic sulfonates family ABC transporter, ...    98   4e-19

>ref|YP_003774078.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ62170.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
           periplasmic component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 328

 Score =  155 bits (393), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 81/85 (95%), Positives = 84/85 (98%)

Query: 10  TWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRPASPILLEEDLV 69
           +WIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALR A+PILLEEDLV
Sbjct: 244 SWIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRAAAPILLEEDLV 303

Query: 70  KSGTDLPRTINALIDPSYAQGVVKA 94
           KSGTDLPRTINALIDPSYAQGVV+A
Sbjct: 304 KSGTDLPRTINALIDPSYAQGVVRA 328


>ref|ZP_08504077.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Methyloversatilis universalis FAM5]
 gb|EGK72625.1| ABC-type nitrate/sulfonate/bicarbonate transport system
           [Methyloversatilis universalis FAM5]
          Length = 331

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/84 (57%), Positives = 67/84 (79%)

Query: 11  WIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRPASPILLEEDLVK 70
           W+IA+PDE   +L+EE+KL+ PVA+ QLKR DFS P+IGREH +ALR A+PIL+EE+LV+
Sbjct: 246 WVIANPDEAAKILAEEAKLNLPVAQAQLKRTDFSNPRIGREHHDALRAAAPILVEEELVR 305

Query: 71  SGTDLPRTINALIDPSYAQGVVKA 94
            GTD+ + +  LIDPS+A  V+ +
Sbjct: 306 KGTDVAKVVTELIDPSHAAAVLAS 329


>ref|YP_003606806.1| aliphatic sulfonates family ABC transporter periplasmic
           ligand-binding protein [Burkholderia sp. CCGE1002]
 gb|ADG17295.1| aliphatic sulfonates family ABC transporter, periplasmic
           ligand-binding protein [Burkholderia sp. CCGE1002]
          Length = 356

 Score =  100 bits (248), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 50/82 (60%), Positives = 63/82 (76%)

Query: 11  WIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRPASPILLEEDLVK 70
           WI AHPD+T  +++EESK+S PVA+LQL RNDFSQPQ G   I AL+ A+PIL++E LVK
Sbjct: 267 WIAAHPDDTARIVAEESKVSLPVAKLQLSRNDFSQPQPGARQIAALKTAAPILVDEQLVK 326

Query: 71  SGTDLPRTINALIDPSYAQGVV 92
           SGTDL   I+AL+D   AQ V+
Sbjct: 327 SGTDLNAIIDALVDAKVAQPVI 348


>ref|ZP_03265700.1| aliphatic sulfonates family ABC transporter, periplsmic
           ligand-binding protein [Burkholderia sp. H160]
 gb|EEA02672.1| aliphatic sulfonates family ABC transporter, periplsmic
           ligand-binding protein [Burkholderia sp. H160]
          Length = 359

 Score = 99.8 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/82 (59%), Positives = 64/82 (78%)

Query: 11  WIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRPASPILLEEDLVK 70
           WI AHPD+T  +++EESK++ PVA+LQL RNDFSQPQ G   I AL+ A+PIL++E LVK
Sbjct: 270 WIAAHPDDTAQIVAEESKVTVPVAKLQLSRNDFSQPQPGARQIAALKAAAPILVDEQLVK 329

Query: 71  SGTDLPRTINALIDPSYAQGVV 92
           SGTDL   I+AL+D + AQ V+
Sbjct: 330 SGTDLSAIIDALVDSNVAQPVI 351


>ref|ZP_06842204.1| aliphatic sulfonates family ABC transporter, periplasmic
           ligand-binding protein [Burkholderia sp. Ch1-1]
 gb|EFG70156.1| aliphatic sulfonates family ABC transporter, periplasmic
           ligand-binding protein [Burkholderia sp. Ch1-1]
          Length = 352

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/84 (58%), Positives = 64/84 (76%)

Query: 11  WIIAHPDETVALLSEESKLSAPVARLQLKRNDFSQPQIGREHIEALRPASPILLEEDLVK 70
           WI AHPD+T  +++EESK+S  VA+LQL RNDFS PQ G + I AL+ A+PIL++E LVK
Sbjct: 263 WIAAHPDDTAKIVAEESKVSLAVAKLQLSRNDFSHPQPGAQQIAALKTAAPILVDEQLVK 322

Query: 71  SGTDLPRTINALIDPSYAQGVVKA 94
           SGTDL + I+ALID   AQ V+ +
Sbjct: 323 SGTDLNQVIDALIDSKIAQTVIAS 346