BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.0762.p (303 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778154.1| chromosome partitioning ParB protein [Herbas... 480 e-133 ref|YP_004755045.1| chromosome (plasmid) partitioning protein Pa... 399 e-109 ref|ZP_08272544.1| Chromosome (plasmid) partitioning protein Par... 383 e-104 ref|YP_001355325.1| ParB chromosome partitioning protein [Janthi... 378 e-103 ref|YP_001101636.1| chromosome partitioning protein [Herminiimon... 377 e-102 >ref|YP_003778154.1| chromosome partitioning ParB protein [Herbaspirillum seropedicae SmR1] gb|ADJ66246.1| chromosome partitioning ParB protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 292/304 (96%), Positives = 298/304 (98%), Gaps = 1/304 (0%) Query: 1 MATLPKKSKGLGRGLDALLGGSSDITEEAQAQAAQ-GLPTVMAVTELQAGKYQPRTRMDE 59 MATLPKKSKGLGRGLDALLGGSSDITEEAQAQAA GLPTVM VTELQAGKYQPRTRMDE Sbjct: 1 MATLPKKSKGLGRGLDALLGGSSDITEEAQAQAAAQGLPTVMPVTELQAGKYQPRTRMDE 60 Query: 60 GALNELAASIKEQGLLQPILIRAIGQKNGKDTYEIIAGERRFRAAKIAGLTEVPVLVKNV 119 GALNELAASIKEQGLLQPILIRAIGQKNG+DTYEIIAGERRFRAAKIAGLTEVPVLV+NV Sbjct: 61 GALNELAASIKEQGLLQPILIRAIGQKNGRDTYEIIAGERRFRAAKIAGLTEVPVLVRNV 120 Query: 120 DDQTTAAMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAALAVGRSRSAVSNLLRLL 179 DDQTTAAMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAA+AVGRSRSAVSNLLRLL Sbjct: 121 DDQTTAAMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAAIAVGRSRSAVSNLLRLL 180 Query: 180 NLAKPVQTMLMAGDIDMGHARALLAVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQA 239 NLAKPVQTMLMAGDIDMGHARALL VDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQA Sbjct: 181 NLAKPVQTMLMAGDIDMGHARALLVVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQA 240 Query: 240 AKPREAKDKSRDIARLEEELSDLLATQVSIKTGARNKGQLIINFNDLDALDGVIARLRGE 299 AKPRE K+KSRDIARLEEELSDLLATQV+IKTGARNKGQLII+FNDLDALDGVI RLRGE Sbjct: 241 AKPREGKEKSRDIARLEEELSDLLATQVNIKTGARNKGQLIISFNDLDALDGVITRLRGE 300 Query: 300 SVES 303 SVES Sbjct: 301 SVES 304 >ref|YP_004755045.1| chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Collimonas fungivorans Ter331] gb|AEK64222.1| Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Collimonas fungivorans Ter331] Length = 298 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 237/295 (80%), Positives = 264/295 (89%), Gaps = 4/295 (1%) Query: 6 KKSKGLGRGLDALLGGSSDITEEAQAQAAQGLPTVMAVTELQAGKYQPRTRMDEGALNEL 65 KKSKGLGRGL+ALLGGS+DITE G P+V+AV+ +QAGKYQPRTRMDEGAL EL Sbjct: 4 KKSKGLGRGLEALLGGSTDITE--AVPTIDGAPSVLAVSVMQAGKYQPRTRMDEGALAEL 61 Query: 66 AASIKEQGLLQPILIRAIGQKNGKDTYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTTA 125 AASIKEQGLLQPIL+R I NG YEIIAGERRFRAA++AGL EVPVLVK+VDDQTTA Sbjct: 62 AASIKEQGLLQPILVRPIALHNGAQHYEIIAGERRFRAAQLAGLIEVPVLVKDVDDQTTA 121 Query: 126 AMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAALAVGRSRSAVSNLLRLLNLAKPV 185 AMALIENMQREDLNPLEEAQGIHRLITDF+FTHEQAA++VGRSRSAVSNLLRLLNLAKPV Sbjct: 122 AMALIENMQREDLNPLEEAQGIHRLITDFSFTHEQAAVSVGRSRSAVSNLLRLLNLAKPV 181 Query: 186 QTMLMAGDIDMGHARALLAVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQ--AAKPR 243 QTMLMAGDIDMGHARALLAVD+ATQI LA+Q+VAKRMSVRD EKLV RA+ E A +P Sbjct: 182 QTMLMAGDIDMGHARALLAVDAATQITLASQVVAKRMSVRDTEKLVVRATTEANGAGRPA 241 Query: 244 EAKDKSRDIARLEEELSDLLATQVSIKTGARNKGQLIINFNDLDALDGVIARLRG 298 + K+KSRDIARLEEELSDLLATQV+IKT A+N+GQLII+F+DLD LDG+IARL+G Sbjct: 242 KNKEKSRDIARLEEELSDLLATQVTIKTTAKNRGQLIIDFSDLDTLDGLIARLKG 296 >ref|ZP_08272544.1| Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Oxalobacteraceae bacterium IMCC9480] gb|EGF33992.1| Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J [Oxalobacteraceae bacterium IMCC9480] Length = 297 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 226/292 (77%), Positives = 251/292 (85%), Gaps = 2/292 (0%) Query: 6 KKSKGLGRGLDALLGGSSDITEEAQAQAAQGLPTVMAVTELQAGKYQPRTRMDEGALNEL 65 K GLGRGL+ALLGGS+D E G P V+ V +QAGKYQPRTRMDEGALNEL Sbjct: 5 KHKSGLGRGLEALLGGSTDF--ELAVPNLPGAPAVLPVVAMQAGKYQPRTRMDEGALNEL 62 Query: 66 AASIKEQGLLQPILIRAIGQKNGKDTYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTTA 125 AASIK QG+LQPIL+R I +G + YEIIAGERRFRAA+IAGL+EVPVLVK+VDDQ+ A Sbjct: 63 AASIKAQGVLQPILVRPIVAHDGIERYEIIAGERRFRAAQIAGLSEVPVLVKDVDDQSAA 122 Query: 126 AMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAALAVGRSRSAVSNLLRLLNLAKPV 185 AMALIEN+QREDLNPLEEAQGIHRLI+DF FTHEQAA AVGRSRSAVSNLLRLLNLA+PV Sbjct: 123 AMALIENIQREDLNPLEEAQGIHRLISDFEFTHEQAATAVGRSRSAVSNLLRLLNLAQPV 182 Query: 186 QTMLMAGDIDMGHARALLAVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQAAKPREA 245 QTMLMAGD+DMGHARALL VD+ATQI LANQIVAKRMSVRDAEKLVTR S+EQ+A P+ Sbjct: 183 QTMLMAGDLDMGHARALLPVDAATQITLANQIVAKRMSVRDAEKLVTRTSSEQSADPQPR 242 Query: 246 KDKSRDIARLEEELSDLLATQVSIKTGARNKGQLIINFNDLDALDGVIARLR 297 K KS DIARLEEELSD LAT V++K GARN+GQL+I+F LDALDGVIARLR Sbjct: 243 KAKSGDIARLEEELSDSLATTVTVKIGARNRGQLVIDFASLDALDGVIARLR 294 >ref|YP_001355325.1| ParB chromosome partitioning protein [Janthinobacterium sp. Marseille] gb|ABR88823.1| ParB chromosome partitioning protein [Janthinobacterium sp. Marseille] Length = 299 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 228/295 (77%), Positives = 255/295 (86%), Gaps = 5/295 (1%) Query: 6 KKSKGLGRGLDALLGGSSDITEEAQAQAAQGLPTVMAVTELQAGKYQPRTRMDEGALNEL 65 KK KGLGRGL+ALLGG+SD E A G P+V+ VT++QAGKYQPRTRMDEGALNEL Sbjct: 4 KKQKGLGRGLEALLGGASDFNE--AIAAIPGAPSVLQVTDMQAGKYQPRTRMDEGALNEL 61 Query: 66 AASIKEQGLLQPILIRAIGQKNGKDTYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTTA 125 AASIK QGLLQ IL+R I N + YEIIAGERRFRAA++AGLTEVPVLVK VDD+ TA Sbjct: 62 AASIKAQGLLQAILVRPIASGNARQRYEIIAGERRFRAAQLAGLTEVPVLVKEVDDEATA 121 Query: 126 AMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAALAVGRSRSAVSNLLRLLNLAKPV 185 AMALIEN+QREDLNPLEEAQGIHRLI DF FTHEQAA +VGRSRSAVSNLLRLLNLAKPV Sbjct: 122 AMALIENIQREDLNPLEEAQGIHRLIADFNFTHEQAANSVGRSRSAVSNLLRLLNLAKPV 181 Query: 186 QTMLMAGDIDMGHARALLAVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQAA--KPR 243 QTMLMAGDIDMGHARALLAVD+ATQI LANQ+VAKRMSVR+AEKLV ++ EQ+ KPR Sbjct: 182 QTMLMAGDIDMGHARALLAVDAATQITLANQVVAKRMSVREAEKLVVCSTLEQSGGNKPR 241 Query: 244 -EAKDKSRDIARLEEELSDLLATQVSIKTGARNKGQLIINFNDLDALDGVIARLR 297 K+KSRDI RLEEELSDLLA+QV IK GA+NKGQL+++F DLDALDG+IA+LR Sbjct: 242 ANGKEKSRDITRLEEELSDLLASQVEIKLGAKNKGQLVVDFADLDALDGIIAKLR 296 >ref|YP_001101636.1| chromosome partitioning protein [Herminiimonas arsenicoxydans] emb|CAL63515.1| Chromosome partitioning protein ParB [Herminiimonas arsenicoxydans] Length = 299 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 230/295 (77%), Positives = 255/295 (86%), Gaps = 5/295 (1%) Query: 6 KKSKGLGRGLDALLGGSSDITEEAQAQAAQGLPTVMAVTELQAGKYQPRTRMDEGALNEL 65 KK KGLGRGL+ALLGG++D E A G P+ + V+++QAGKYQPRTRMDEGALNEL Sbjct: 4 KKQKGLGRGLEALLGGATDFNE--AVAAIPGAPSTLQVSDMQAGKYQPRTRMDEGALNEL 61 Query: 66 AASIKEQGLLQPILIRAIGQKNGKDTYEIIAGERRFRAAKIAGLTEVPVLVKNVDDQTTA 125 AASIK QGLLQ IL+R I NG+D YEIIAGERRFRAA++AGLTEVPVLVK VDD+ A Sbjct: 62 AASIKAQGLLQAILVRPIAAHNGRDRYEIIAGERRFRAAQLAGLTEVPVLVKEVDDEAAA 121 Query: 126 AMALIENMQREDLNPLEEAQGIHRLITDFAFTHEQAALAVGRSRSAVSNLLRLLNLAKPV 185 AMALIEN+QREDLNPLEEAQGIHRLI DF FTHEQAA AVGRSRSAVSNLLRLLNLAKPV Sbjct: 122 AMALIENIQREDLNPLEEAQGIHRLIADFNFTHEQAAHAVGRSRSAVSNLLRLLNLAKPV 181 Query: 186 QTMLMAGDIDMGHARALLAVDSATQIQLANQIVAKRMSVRDAEKLVTRASAEQA--AKPR 243 QTMLMAGDIDMGHARALLAVD+ TQI LANQ+VAKRMSVR+AEKLV RA+ EQA +KPR Sbjct: 182 QTMLMAGDIDMGHARALLAVDAGTQITLANQVVAKRMSVREAEKLVVRATLEQATGSKPR 241 Query: 244 -EAKDKSRDIARLEEELSDLLATQVSIKTGARNKGQLIINFNDLDALDGVIARLR 297 K+KSRDIARLEEELSD LATQV+IK GA+NKGQL+I F LDALDG+IA+LR Sbjct: 242 ANGKEKSRDIARLEEELSDALATQVAIKLGAKNKGQLVIEFAGLDALDGIIAKLR 296